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2024-05-25 17:50:48

Gene list

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Genomic element: D

Number of genes found: 112

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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RSP_4170 D pseudo27549 216 + 0.601852
NA RSP_4234 Thioredoxin domain proteinSubName: Full=Thioredoxin domain protein; D CDS78948 399 + 0.726817
NA RSP_4172 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS29003 378 - 0.600529
NA RSP_4227 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS73350 318 + 0.654088
NA RSP_4197 antisigma-factor antagonist, STASSubName: Full=Antisigma-factor antagonist, STAS; D CDS47658 1491 + 0.655265
NA RSP_4215 ISxcd1 transposase D CDS63080 372 - 0.63172
NA RSP_4188 hypothetical memebrane proteinRecName: Full=Ribonuclease VapC; Short=RNase VapC; EC=3.1.-.-; AltName: Full=Toxin VapC; D CDS38609 396 + 0.60101
NA RSP_4209 Acyltransferase 3 familySubName: Full=Acyltransferase 3 family; D CDS56604 1179 - 0.6743
NA RSP_4252 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS99779 492 - 0.668699
NA RSP_4151 conserved hypothetical protein/posible transposase D CDS12450 321 + 0.595016
NA RSP_4167 Transposase, IS3/IS911familySubName: Full=Transposase, IS3/IS911family; D CDS26326 423 - 0.65721
NA RSP_4199 conserved hypothetical proteinSubName: Full=DnaK suppressor protein; D CDS50016 336 + 0.699405
NA RSP_4202 D sig_peptide52085 72 + 0.75
NA RSP_7384 hypothetical protein D CDS8711 519 + 0.685934
NA RSP_4168 D pseudo26991 258 - 0.616279
NA RSP_4165 Transposase IS66SubName: Full=Transposase IS66; D CDS24336 1572 - 0.680662
NA RSP_4157 Radical SAM superfamily proteinSubName: Full=Radical SAM superfamily protein; D CDS16517 1071 + 0.571429
NA RSP_4182 Transposase IS66 D CDS32931 1002 + 0.683633
NA RSP_4158 Generic methyltransferase D CDS17721 927 + 0.622438
NA RSP_4245 conserved hypothetical protein D CDS94487 570 - 0.62807
NA RSP_4246 putative SinR-like proteinSubName: Full=Putative SinR-like protein; D CDS95209 279 + 0.648746
NA RSP_7383 hypothetical proteinSubName: Full=Uncharacterized protein; D CDS8156 414 + 0.698068
NA RSP_4251 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS99220 558 - 0.670251
NA RSP_4248 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS97293 1191 + 0.627204
NA RSP_7392 conserved hypothetical protein D CDS92138 273 - 0.545788
NA RSP_7332 conserved hypothetical protein D CDS56211 156 - 0.653846
NA RSP_4193 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS44599 555 + 0.603604
NA RSP_7390 Transposase and inactivated derivativesSubName: Full=Transposase and inactivated derivatives; D CDS63999 1218 - 0.632184
NA RSP_7388 Transposase and inactivated derivatives D CDS46985 537 + 0.608939
NA RSP_4178 putative transposase, ISRm14SubName: Full=Putative transposase, ISRm14; D CDS31798 309 + 0.705502
NA RSP_4161 O-acetylhomoserine sulfhydrylaseSubName: Full=O-acetylhomoserine sulfhydrylase; EC=2.5.1.49; D CDS20168 1323 + 0.623583
NA RSP_4179 D pseudo32103 120 + 0.641667
NA RSP_4138 conserved hypothetical protein D CDS436 576 + 0.645833
NA RSP_4234 D sig_peptide78948 66 + 0.742424
NA RSP_7322 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS95592 1242 + 0.638486
NA RSP_4181 conserved hypothetical protein D CDS32571 300 + 0.663333
NA RSP_7391 hypothetical proteinSubName: Full=Acetyltransferase (GNAT) family; D CDS85998 513 + 0.588694
NA RSP_7393 conserved hypothetical protein D CDS98706 171 - 0.649123
NA RSP_4180 D pseudo32232 177 + 0.610169
NA RSP_4195 Response regulator receiver proteinSubName: Full=Response regulator receiver protein; D CDS46184 465 + 0.64086
NA RSP_4201 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; D CDS51804 285 + 0.652632
NA RSP_4203 putative glutaredoxin family protein/Thio-disulfide isomeraseSubName: Full=Putative glutaredoxin family protein/Thio-disulfide isomerase; D CDS53156 231 + 0.649351
NA RSP_4160 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS19807 369 + 0.544715
NA RSP_4189 TonB-dependent receptor proteinSubName: Full=TonB-dependent receptor protein; D CDS39084 885 - 0.697175
NA RSP_4210 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; EC=1.20.4.1; D CDS58192 813 + 0.685117
NA RSP_4206 D pseudo53957 423 + 0.680851
NA RSP_7389 D pseudo49160 513 + 0.701754
NA RSP_4154 putative transposase D CDS15008 531 - 0.6629
NA RSP_4204 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS53383 318 + 0.691824
NA RSP_4144 Protein of unknown function DUF159SubName: Full=Uncharacterized protein; D CDS7210 672 + 0.677083
NA RSP_4183 D pseudo33947 147 + 0.639456
NA RSP_4200 Major facilitator superfamily (MFS) transporterSubName: Full=Major facilitator superfamily (MFS) transporter; D CDS50383 1251 + 0.693845
NA RSP_4171 hypothetical proteinSubName: Full=Uncharacterized protein; D CDS28133 828 + 0.600242
NA RSP_7385 Putative threonine efflux proteinSubName: Full=Putative threonine efflux protein; D CDS12853 651 - 0.597542
NA RSP_4236 hypothetical proteinSubName: Full=Uncharacterized protein; D CDS80180 246 + 0.654472
NA RSP_4194 possible ATPase-like/sensor kinaseSubName: Full=Putative ATPase-like/sensor kinase; D CDS45153 1035 + 0.636715
NA RSP_4162 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS21526 777 + 0.603604
NA RSP_4244 conserved hypothetical proteinSubName: Full=Putative Zn peptidase; D CDS93277 786 - 0.637405
NA RSP_4212 putative multidrug-efflux transporterSubName: Full=Putative multidrug-efflux transporter; D CDS60055 1239 + 0.703793
NA RSP_4213 D pseudo61700 261 - 0.62069
NA RSP_4252 D sig_peptide100199 72 - 0.652778
NA RSP_4171 D sig_peptide28133 81 + 0.54321
NA RSP_4150 conserved hypothetical proteinSubName: Full=Putative arginyl-tRNA:protein arginylyltransferase; D CDS11721 666 + 0.648649
NA RSP_4153 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS13510 1092 - 0.619048
NA RSP_7280 SpoVT/AbrB-like cell growth regulatory proteinSubName: Full=SpoVT/AbrB-like cell growth regulatory protein; D CDS38392 228 + 0.644737
NA RSP_4202 Predicted transporterSubName: Full=Putative transporter; D CDS52085 1059 + 0.677054
NA RSP_4166 Transposase, IS66 Orf2 likeSubName: Full=Transposase, IS66 Orf2 like; D CDS25976 354 - 0.689266
NA RSP_7387 replication initiator RepCSubName: Full=Replication initiator RepC; D CDS34613 1212 - 0.584158
NA RSP_4247 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS96830 483 + 0.625259
NA RSP_4148 N6 adenine-specific DNA methyltransferase, N12 classSubName: Full=N6 adenine-specific DNA methyltransferase, N12 class; D CDS9512 1446 - 0.669433
NA RSP_7273 D pseudo31496 108 + 0.583333
NA RSP_7386 Asparagine synthase (glutamine-hydrolyzing)RecName: Full=Asparagine synthetase; EC=6.3.5.4; D CDS22311 1764 + 0.626417
NA RSP_4149 conserved hypothetical proteinSubName: Full=Uncharacterized protein; D CDS11008 396 - 0.603535
NA RSP_4190 Heme oxygenaseSubName: Full=Heme oxygenase; D CDS40681 594 + 0.654882
NA RSP_4156 transposase, IS66 Orf2 D CDS15885 291 - 0.67354
NA RSP_4242 Hemolysin-type calcium-binding proteinSubName: Full=Hemolysin-type calcium-binding protein; D CDS87069 4635 + 0.577778
NA RSP_4207 Glycosyl transferase, group 1SubName: Full=Glycosyl transferase, group 1; D CDS55012 1128 + 0.699468
NA RSP_4159 isopropylmalate/homocitrate synthaseSubName: Full=Isopropylmalate/homocitrate synthase; EC=2.3.3.13; D CDS18722 1011 + 0.616222
NA RSP_4192 D pseudo44315 222 - 0.657658
bhpP RSP_4191 Phytochrome sensor diguanylate cyclase/phosphodiesteraseSubName: Full=Phytochrome sensor diguanylate cyclase/phosphodiesterase; D CDS41195 2943 + 0.668026
gapA-1 RSP_4211 Glyceraldehyde-3-phosphate dehydrogenase, type ISubName: Full=Glyceraldehyde-3-phosphate dehydrogenase, type I; EC=1.2.1.12; D CDS59004 1008 + 0.665675
parA RSP_4139 possible partition parA like-proteinSubName: Full=Putative partition parA like-protein; D CDS3166 726 + 0.590909
repA RSP_4186 RepA partitioning protein/ATPase, ParA typeSubName: Full=RepA partitioning protein/ATPase, ParA type; D CDS36993 1185 - 0.568776
repB RSP_4185 D sig_peptide36916 78 - 0.666667
repB RSP_4185 Rep B partitioning protein/ParB-like proteinSubName: Full=Rep B partitioning protein/ParB-like protein; D CDS36007 987 - 0.610942
tnp RSP_7300 putative transposase D CDS62195 378 + 0.621693
traA RSP_4219 hypothetical proteinSubName: Full=Uncharacterized protein; D CDS67218 351 + 0.675214
traA RSP_4219 D sig_peptide67218 69 + 0.724638
traB RSP_4224 putative conjugative transfer factor, TraBSubName: Full=Putative conjugative transfer factor, TraB; D CDS69195 1254 + 0.69059
traC RSP_4226 TraCSubName: Full=TraC; D CDS70870 2484 + 0.652577
traE RSP_4221 hypothetical proteinSubName: Full=TraE protein; D CDS67925 555 + 0.628829
traF RSP_4235 D sig_peptide79339 66 + 0.712121
traF RSP_4235 TraFSubName: Full=TraF; D CDS79339 834 + 0.657074
traG RSP_4238 TraGSubName: Full=TraG; D CDS81837 3411 + 0.62445
traH RSP_4237 D sig_peptide80436 72 + 0.666667
traH RSP_4237 TraHSubName: Full=TraH; D CDS80436 1398 + 0.646638
traK RSP_4222 D sig_peptide68476 63 + 0.698413
traK RSP_4222 conserved hypothetical proteinSubName: Full=TraK protein; D CDS68476 720 + 0.677778
traL RSP_4220 TraLSubName: Full=TraL; D CDS67635 291 + 0.62543
traN RSP_4233 TraNSubName: Full=TraN; D CDS76838 2109 + 0.627312
traN RSP_4233 D sig_peptide76838 69 + 0.724638
traP RSP_4229 signal peptidase ISubName: Full=Signal peptidase I; D CDS74001 531 + 0.679849
traU RSP_4231 TraUSubName: Full=TraU; D CDS75142 987 + 0.651469
traU RSP_4231 D sig_peptide75142 69 + 0.652174
traV RSP_4225 conserved hypothetical proteinSubName: Full=Type IV conjugative transfer system lipoprotein (TraV); D CDS70445 429 + 0.682984
traV RSP_4225 D sig_peptide70445 69 + 0.695652
traW RSP_4230 TraWSubName: Full=TraW; D CDS74507 639 + 0.665102
traW RSP_4230 D sig_peptide74507 72 + 0.736111
trbC RSP_4232 TrbC, sex pilus assembly and mating pair formation proteinSubName: Full=TrbC, sex pilus assembly and mating pair formation protein; D CDS76089 753 + 0.705179
trbC RSP_4232 D sig_peptide76089 81 + 0.716049
trbI RSP_4228 Sex-pilus assembly proteinSubName: Full=Sex-pilus assembly protein; D CDS73645 360 + 0.658333
uspA RSP_4198 D pseudo49668 342 + 0.695906