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2024-05-05 18:37:47

Gene list

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Genomic element: B

Number of genes found: 119

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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RSP_4014 B sig_peptide31924 102 + 0.666667
NA RSP_3966 ABC branched chain amino acid transporter, inner membrane subunitB CDS87645 1014 + 0.686391
NA RSP_7166 B sig_peptide76647 66 - 0.772727
NA RSP_4034 ABC sugar transporter, ATPase subunitB CDS6757 1059 + 0.694051
NA RSP_4002 Dihydrodipicolinate synthetaseB CDS46305 906 - 0.683223
NA RSP_3972 Short-chain dehydrogenase/reductase SDRB CDS81860 792 - 0.694444
NA RSP_3977 transcriptional regulator, LysR familyB CDS75213 924 + 0.712121
NA RSP_4008 trimethylamine methyltransferase MttB-like proteinB CDS39276 1554 + 0.681467
NA RSP_4014 TRAP-T family transporter, large inner membrane subunit DctMB CDS31924 1341 + 0.677107
NA RSP_3964 ABC branched chain amino acid transporter, ATPase subunitB CDS89424 708 + 0.701977
NA RSP_3975 periplasmic sensor signal transduction histidine kinaseB CDS77510 1317 + 0.753227
NA RSP_4032 Succinate semialdehyde dehydrogenaseB CDS8935 1446 + 0.717842
NA RSP_3991 conserved hypothetical proteinB CDS57879 1020 + 0.720588
NA RSP_3982 conserved hypothetical proteinB CDS70301 1437 + 0.700765
NA RSP_4039 Protein of unknown function DUF583B CDS1733 363 + 0.732782
NA RSP_3973 transcriptional regulator, AsnC familyB CDS81382 465 - 0.692473
NA RSP_3959 conserved hypothetical proteinB CDS92579 2283 + 0.690758
NA RSP_7370 short-chain alcohol dehydrogenasesB CDS91770 744 - 0.701613
NA RSP_4007 Mandelate racemase/muconate lactonizing enzymeB CDS40884 1107 + 0.712737
NA RSP_7369 two component transcriptional regulator, winged-helix familyB CDS76848 660 + 0.690909
NA RSP_3940 conserved hypothetical proteinB CDS111689 939 - 0.764643
NA RSP_7166 conserved hypothetical proteinB CDS76416 297 - 0.727273
NA RSP_4027 B sig_peptide14654 57 + 0.824561
NA RSP_4006 Short-chain dehydrogenase/reductase SDRB CDS41999 735 + 0.726531
NA RSP_3998 B sig_peptide50145 66 + 0.606061
NA RSP_7124 conserved hypothetical proteinB CDS62278 549 + 0.684882
NA RSP_3998 ABC Glycine betaine/L-proline transporter, periplasmic ligand binding proteinB CDS50145 987 + 0.655522
NA RSP_7371 short-chain alcohol dehydrogenasesB CDS94858 765 + 0.72549
NA RSP_4037 B sig_peptide3642 60 + 0.7
NA RSP_3994 conserved hypothetical proteinB CDS53078 336 - 0.761905
NA RSP_4027 hypothetical protein with parallel beta-helix repeatB CDS14654 1935 + 0.735917
NA RSP_3965 ABC branched chain amino acid transporter, ATPase subunitB CDS88655 783 + 0.678161
NA RSP_3979 FerredoxinB CDS72749 1062 - 0.696799
NA RSP_3992 conserved hypothetical membrane proteinB CDS57058 681 + 0.704846
NA RSP_4018 diguanylate cyclaseB CDS27710 936 + 0.701923
NA RSP_3980 Universal stress protein (Usp)B CDS72059 450 - 0.706667
NA RSP_3971 transcriptional regulator, GntR familyB CDS82655 747 - 0.694779
NA RSP_4013 conserved hypothetical proteinB CDS33282 396 + 0.712121
NA RSP_3967 B sig_peptide86764 72 + 0.652778
NA RSP_4005 oxidoreductase, NAD-binding siteB CDS43470 1341 - 0.745712
NA RSP_3989 NAD-dependent epimerase/dehydrataseB CDS61158 999 - 0.712713
NA RSP_3986 conserved hypothetical proteinB CDS65293 1002 + 0.691617
NA RSP_3994 B sig_peptide53342 72 - 0.763889
NA RSP_4024 conserved hypothetical proteinB CDS19541 777 + 0.7426
NA RSP_3963 Short-chain dehydrogenase/reductase SDRB CDS90154 756 + 0.675926
NA RSP_3940 B sig_peptide112577 51 - 0.686275
NA RSP_4017 transcriptional regulator, GntR familyB CDS28731 1470 - 0.718367
NA RSP_3946 conserved hypothetical proteinB CDS105404 1413 - 0.745931
NA RSP_4010 Conserved hypothetical protein 698B CDS37146 1020 + 0.722549
NA RSP_4024 B sig_peptide19541 60 + 0.716667
NA RSP_3995 conserved hypothetical proteinB CDS52324 564 + 0.742908
NA RSP_7368 Transcriptional regulator, GntR familyB CDS47228 753 - 0.687915
NA RSP_3945 Carbohydrate kinase, PfkBB CDS106818 858 - 0.72028
NA RSP_7367 AbrB protein (AidB regulator)B CDS16621 1065 - 0.732394
NA RSP_3988 possible glycosyltransferaseB CDS62823 2382 + 0.676742
NA RSP_3955 Arginino succinate lyaseB CDS97425 1500 - 0.718
NA RSP_3993 Hemolysin-type calcium-binding proteinB CDS53501 3339 - 0.683438
NA RSP_3978 ring hydroxylating dioxygenase, alpha subunitB CDS73814 1233 - 0.68532
NA RSP_3968 B sig_peptide85514 81 + 0.617284
NA RSP_3968 ABC branched chain amino acid transporter, periplasmic ligand binding proteinB CDS85514 1254 + 0.668262
NA RSP_7172 conserved hypothetical proteinB CDS60354 408 - 0.70098
NA RSP_4035 ABC sugar transporter, inner membrane subunitB CDS5912 813 + 0.665437
NA RSP_4028 Acyltransferase 3 familyB CDS13573 1065 + 0.673239
NA RSP_4019 transcriptional regulator, LysR familyB CDS26299 1005 + 0.713433
NA RSP_3956 Sugar isomerase (SIS)B CDS96319 1014 - 0.670611
NA RSP_3981 conserved hypothetical proteinB CDS71745 267 - 0.749064
NA RSP_4037 ABC sugar transporter, periplasmic lignad binding proteinB CDS3642 1290 + 0.679845
NA RSP_4031 Isocitrate/isopropylmalate dehydrogenaseB CDS10377 1056 + 0.70928
NA RSP_3947 transcriptional regulator, GntR familyB CDS103518 726 + 0.706612
NA RSP_3969 protein of unknown function DUF849B CDS84519 933 + 0.677385
NA RSP_3985 conserved hypothetical proteinB CDS66565 1467 + 0.734833
NA RSP_3974 TransketolaseB CDS79001 2367 + 0.705534
NA RSP_3995 B sig_peptide52324 75 + 0.733333
NA RSP_7366 ABC sugar transporter, inner membrane subunitB CDS5076 837 + 0.682198
NA RSP_3963 B sig_peptide90154 84 + 0.702381
NA RSP_3954 conserved hypothetical proteinB CDS98921 231 - 0.766234
NA RSP_3997 transcriptional regulator, AraC familyB CDS51181 951 + 0.696109
NA RSP_4019 B sig_peptide26299 63 + 0.714286
NA RSP_4004 Short-chain dehydrogenase/reductase SDRB CDS42730 780 + 0.74359
NA RSP_3990 Poly (3-hydroxybutyrate ) depolymeraseB CDS59130 1191 - 0.764064
NA RSP_3948 ABC sugar transporter, ATPase subunitB CDS104224 1122 - 0.705882
NA RSP_3957 Flavoprotein oxidoreductaseB CDS95632 528 + 0.715909
NA RSP_3939 transcriptional regulator, LacI familyB CDS112756 1065 - 0.719249
NA RSP_3970 3-hydroxyacyl-CoA dehydrogenaseB CDS83574 936 + 0.729701
NA RSP_3967 ABC branched chain amino acid transporter, inner membrane subunitB CDS86764 882 + 0.662132
aapP RSP_3950 AABC amino acid transporter, ATPase subunitB CDS101527 753 - 0.664011
ansB RSP_3949 Asparaginase/glutaminaseB CDS102498 999 + 0.746747
ansB RSP_3949 B sig_peptide102498 75 + 0.76
dctP RSP_4016 TRAP-T family transporter, DctP subunitB CDS30256 1056 + 0.663826
dctQ RSP_4015 TRAP-T family transporter, periplasmic ligand binding protein, DctQB CDS31364 561 + 0.638146
dhaL RSP_4003 Aldehyde dehydrogenaseB CDS44807 1497 - 0.707415
frlC RSP_3944 AP endonuclease, family 2B CDS107672 858 - 0.730769
fsr RSP_4025 Major facilitator superfamily, Fosmidomycin resistant proteinB CDS17973 1206 - 0.685738
fumC RSP_4020 B pseudo25696 267 + 0.71161
glpR RSP_4038 transcriptional regulator, DeoR familyB CDS2641 828 + 0.692029
gtpB RSP_3951 B sig_peptide101378 84 - 0.75
gtpB RSP_3951 ABC amino acid transporter, periplasmic ligand binding proteinB CDS100619 843 - 0.673784
gtpC RSP_3952 ABC amino acid transporter, inner membrane subunitB CDS99890 669 - 0.678625
gtpD RSP_3953 ABC amino acid transporter, inner membrane subunitB CDS99154 732 - 0.680328
ilvB2 RSP_4011 Pyruvate decarboxylaseB CDS35085 1782 + 0.684624
kaiB2 RSP_3983 circadian clock KaiB-like proteinB CDS70026 270 + 0.622222
kaiC2 RSP_3984 RecA DNA recombination proteinB CDS68311 1713 + 0.680093
pcaD RSP_3962 Esterase/lipase/thioesteraseB CDS90920 801 + 0.686642
proV RSP_4000 ABC Glycine betaine/L-proline transporter, ATPase subunitB CDS48080 1089 + 0.671258
proW RSP_3999 ABC Glycine betaine/L-proline transporter, inner membrane subunitB CDS49168 942 + 0.684713
pta RSP_4009 Phosphate acetyl/butaryl transferaseB CDS38175 999 + 0.742743
repA3 RSP_4023 ATPase, ParA typeB CDS20487 1179 + 0.653944
repB1 RSP_4022 B sig_peptide21662 63 + 0.714286
repB1 RSP_4022 ParB-like partition proteinB CDS21662 951 + 0.678233
repC2 RSP_4021 Replication protein CB CDS22769 1302 + 0.68894
tauD RSP_4012 FAD dependent oxidoreductaseB CDS33684 1389 + 0.712743
tdh RSP_4033 Zinc-containing alcohol dehydrogenaseB CDS7843 1014 + 0.696252
y4bF RSP_4040 B pseudo621 801 + 0.682896
yihT RSP_4030 Tagatose 1,6-diphosphate aldolaseB CDS11462 870 + 0.733333
yihV RSP_4029 Carbohydrate kinase, PfkBB CDS12357 900 + 0.778889
yurM RSP_3943 ABC sugar transporter, inner membrane subunitB CDS108526 846 - 0.659574
yurN RSP_3942 ABC sugar transporter, inner membrane subunitB CDS109368 966 - 0.651139
yurO RSP_3941 ABC sugar transporter, periplasmic ligand binding proteinB CDS110333 1311 - 0.655225
yurO RSP_3941 B sig_peptide111566 78 - 0.705128