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2024-04-30 14:07:28

Gene list

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Genomic element: small plasmid

Number of genes found: 60

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_B0024 conserved hypothetical proteinsmall plasmid CDS19738 312 + 0.560897
NA PSPPH_B0017 site-specific recombinase, phage integrase familysmall plasmid CDS13780 960 - 0.634375
NA PSPPH_B0035 conjugal transfer proteinsmall plasmid CDS28015 1401 + 0.62384
NA PSPPH_B0021 conserved hypothetical proteinsmall plasmid CDS18404 198 + 0.368687
NA PSPPH_B0046 TraLsmall plasmid CDS39151 915 + 0.503825
NA PSPPH_B0048 conserved hypothetical proteinsmall plasmid CDS40745 387 - 0.516796
NA PSPPH_B0031 conjugal transfer proteinsmall plasmid CDS25107 936 + 0.537393
NA PSPPH_B0041 conjugal transfer proteinsmall plasmid CDS33866 1653 + 0.571083
NA PSPPH_B0009 ParA family proteinsmall plasmid CDS5774 654 + 0.501529
NA PSPPH_B0032 conjugal transfer proteinsmall plasmid CDS26101 303 + 0.643564
NA PSPPH_B0055 addiction module toxin, RelE/StbE familysmall plasmid CDS47338 282 - 0.595745
NA PSPPH_B0037 conserved hypothetical proteinsmall plasmid CDS30466 357 + 0.596639
NA PSPPH_B0014 ISPsy18, transposasesmall plasmid CDS11206 1260 + 0.560317
NA PSPPH_B0006 conserved hypothetical proteinsmall plasmid CDS4154 300 - 0.506667
NA PSPPH_B0054 putative TnpA repressor proteinsmall plasmid CDS46967 336 - 0.571429
NA PSPPH_B0012 hypothetical proteinsmall plasmid CDS8630 303 + 0.488449
NA PSPPH_B0023 transcriptional regulatorsmall plasmid CDS18999 750 + 0.513333
NA PSPPH_B0007 conserved hypothetical proteinsmall plasmid CDS4604 309 + 0.540453
NA PSPPH_B0010 hypothetical proteinsmall plasmid CDS6516 252 + 0.551587
NA PSPPH_B0033 conjugal transfer proteinsmall plasmid CDS26441 789 + 0.585551
NA PSPPH_B0005 transcriptional regulator, Cro/CI familysmall plasmid CDS3873 297 - 0.521886
NA PSPPH_B0056 DNA-damage-inducible proteinsmall plasmid CDS47606 294 - 0.602041
NA PSPPH_B0053 conserved hypothetical proteinsmall plasmid CDS46617 327 - 0.620795
NA PSPPH_B0013 conserved hypothetical proteinsmall plasmid CDS9023 1428 + 0.530112
NA PSPPH_B0019 conserved hypothetical proteinsmall plasmid CDS15775 1197 + 0.480368
NA PSPPH_B0034 conjugal transfer proteinsmall plasmid CDS27219 810 + 0.602469
NA PSPPH_B0029 conjugal transfer proteinsmall plasmid CDS24024 687 + 0.576419
NA PSPPH_B0026 conjugal transfer proteinsmall plasmid CDS20787 339 + 0.610619
NA PSPPH_B0057 resolvase, putativesmall plasmid CDS48080 576 + 0.618056
NA PSPPH_B0028 conjugal transfer proteinsmall plasmid CDS21475 2553 + 0.581669
NA PSPPH_B0059 exeA-like proteinsmall plasmid CDS50287 972 + 0.61214
NA PSPPH_B0050 relaxase, putativesmall plasmid CDS41862 3744 + 0.580128
NA PSPPH_B0047 conserved hypothetical proteinsmall plasmid CDS40074 639 + 0.478873
NA PSPPH_B0025 conjugal transfer proteinsmall plasmid CDS20077 714 + 0.596639
NA PSPPH_B0002 Replicase family familysmall plasmid CDS304 1314 + 0.61035
NA PSPPH_B0038 hypothetical proteinsmall plasmid CDS30947 234 + 0.538462
NA PSPPH_B0045 single-strand binding proteinsmall plasmid CDS38451 567 + 0.587302
NA PSPPH_B0008 conserved hypothetical proteinsmall plasmid CDS4964 417 + 0.541966
NA PSPPH_B0040 hypothetical proteinsmall plasmid CDS33579 288 + 0.59375
NA PSPPH_B0030 conserved hypothetical proteinsmall plasmid CDS24773 324 + 0.450617
NA PSPPH_B0039 hypothetical proteinsmall plasmid CDS31164 2391 + 0.578837
NA PSPPH_B0051 transcriptional regulator, GntR familysmall plasmid CDS45733 273 + 0.589744
NA PSPPH_B0058 site-specific recombinase, phage integrase familysmall plasmid CDS48636 1662 + 0.616125
NA PSPPH_B0049 possible relaxosome componentsmall plasmid CDS41522 351 + 0.507123
NA PSPPH_B0027 conjugal transfer proteinsmall plasmid CDS21138 489 + 0.562372
NA PSPPH_B0036 conjugal transfer proteinsmall plasmid CDS29425 1032 + 0.580426
NA PSPPH_B0011 conserved hypothetical proteinsmall plasmid CDS7035 642 + 0.593458
NA PSPPH_B0060 transcriptional regulator, GntR familysmall plasmid CDS51401 204 + 0.598039
NA PSPPH_B0044 hypothetical proteinsmall plasmid CDS38140 288 + 0.576389
NA PSPPH_B0052 conserved hypothetical proteinsmall plasmid CDS46249 384 - 0.596354
NA PSPPH_B0001 hypothetical proteinsmall plasmid CDS134 174 + 0.574713
NA PSPPH_B0020 major facilitator family transportersmall plasmid CDS17001 1359 + 0.468727
NA PSPPH_B0018 transcriptional regulator, GntR familysmall plasmid CDS14998 702 + 0.508547
NA PSPPH_B0042 killer protein, putativesmall plasmid CDS35558 363 + 0.628099
NA PSPPH_B0015 prevent-host-death family proteinsmall plasmid CDS13126 279 + 0.501792
rulA PSPPH_B0003 ultraviolet light resistance protein Asmall plasmid CDS1757 426 + 0.544601
rulB PSPPH_B0004 RulB proteinsmall plasmid CDS2175 1284 + 0.562305
topB2 PSPPH_B0043 DNA topoisomerase IIIsmall plasmid CDS35948 2166 + 0.611727
txe PSPPH_B0016 addiction module toxin Txesmall plasmid CDS13376 303 + 0.50165
xre PSPPH_B0022 transcriptional regulator, PbsX familysmall plasmid CDS18615 357 - 0.464986