TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-04-30 16:23:48

Gene list

Applied filters:

Genomic element: large plasmid

Number of genes found: 149

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_A0020 large plasmid pseudo18141 278 + 0.5
NA PSPPH_A0101 DNA invertaselarge plasmid CDS89254 612 + 0.553922
NA PSPPH_A0018 hypothetical proteinlarge plasmid CDS16817 135 - 0.481481
NA PSPPH_A0103 addiction module toxin, RelE/StbE familylarge plasmid CDS90222 279 + 0.537634
NA PSPPH_A0069 stability/partitioning determinantlarge plasmid CDS58764 636 + 0.569182
NA PSPPH_A0064 outer-membrane fimbrial usher proteinlarge plasmid CDS52693 2496 + 0.546074
NA PSPPH_A0049 plasmid partition protein ParB, truncatedlarge plasmid CDS40740 219 + 0.497717
NA PSPPH_A0106 hypothetical conserved protein, putativelarge plasmid CDS91331 579 - 0.509499
NA PSPPH_A0054 large plasmid pseudo43799 1233 - 0.604217
NA PSPPH_A0092 hypothetical proteinlarge plasmid CDS80325 789 + 0.382763
NA PSPPH_A0053 transposase, truncatedlarge plasmid CDS43468 159 + 0.553459
NA PSPPH_A0083 IS801, transposaselarge plasmid CDS71644 1233 + 0.604217
NA PSPPH_A0068 ISPsy19, transposaselarge plasmid CDS57374 1104 + 0.555254
NA PSPPH_A0136 Plasmid stability protein stbBlarge plasmid CDS121721 420 - 0.569048
NA PSPPH_A0008 hypothetical proteinlarge plasmid CDS5387 183 - 0.453552
NA PSPPH_A0058 large plasmid pseudo48770 153 - 0.575163
NA PSPPH_A0116 ISPsy16, transposase, truncatedlarge plasmid CDS99150 846 + 0.553191
NA PSPPH_A0119 large plasmid pseudo101391 600 + 0.586667
NA PSPPH_A0019 site-specific recombinase, resolvase family, truncatedlarge plasmid CDS17661 273 - 0.534799
NA PSPPH_A0139 stability/partitioning determinant, putativelarge plasmid CDS123560 324 + 0.490741
NA PSPPH_A0135 Resolvaselarge plasmid CDS121048 633 - 0.56872
NA PSPPH_A0115 ISPsy18, transposase, truncatedlarge plasmid CDS98340 507 - 0.577909
NA PSPPH_A0143 transposase family proteinlarge plasmid CDS127165 279 + 0.548387
NA PSPPH_A0110 hypothetical proteinlarge plasmid CDS94897 966 - 0.520704
NA PSPPH_A0079 large plasmid pseudo66541 363 - 0.567493
NA PSPPH_A0149 hypothetical proteinlarge plasmid CDS131805 108 - 0.444444
NA PSPPH_A0111 hypothetical proteinlarge plasmid CDS95880 99 - 0.515152
NA PSPPH_A0118 IS801, transposase, truncatedlarge plasmid CDS101101 111 - 0.621622
NA PSPPH_A0128 ISPsy16, transposaselarge plasmid CDS109179 1035 - 0.575845
NA PSPPH_A0104 hypothetical proteinlarge plasmid CDS90704 222 - 0.563063
NA PSPPH_A0011 hypothetical proteinlarge plasmid CDS9297 102 - 0.578431
NA PSPPH_A0098 hypothetical proteinlarge plasmid CDS85657 123 - 0.536585
NA PSPPH_A0065 invasin protein AfaDlarge plasmid CDS55181 450 + 0.511111
NA PSPPH_A0060 ISPsy26, transposase orfAlarge plasmid CDS49335 279 + 0.548387
NA PSPPH_A0145 conjugal transfer proteinlarge plasmid CDS127806 1956 + 0.583333
NA PSPPH_A0022 conserved hypothetical proteinlarge plasmid CDS18767 414 + 0.574879
NA PSPPH_A0003 large plasmid pseudo1723 905 - 0.59116
NA PSPPH_A0045 hypothetical proteinlarge plasmid CDS37268 354 - 0.449153
NA PSPPH_A0030 ISPsy16, transposase, truncatedlarge plasmid CDS25081 498 + 0.586345
NA PSPPH_A0035 conserved hypothetical proteinlarge plasmid CDS29724 201 - 0.572139
NA PSPPH_A0076 resolvase, truncatedlarge plasmid CDS63620 285 - 0.557895
NA PSPPH_A0146 conjugal transfer proteinlarge plasmid CDS129758 312 + 0.557692
NA PSPPH_A0032 transposase family protein, truncatedlarge plasmid CDS28496 288 - 0.572917
NA PSPPH_A0023 conserved hypothetical protein, truncatedlarge plasmid CDS19153 150 - 0.6
NA PSPPH_A0125 conserved domain proteinlarge plasmid CDS106665 150 - 0.546667
NA PSPPH_A0132 ISPsy16, transposaselarge plasmid CDS112693 1035 + 0.574879
NA PSPPH_A0004 conserved hypothetical proteinlarge plasmid CDS2807 189 + 0.571429
NA PSPPH_A0013 large plasmid pseudo10876 1225 + 0.580408
NA PSPPH_A0144 conjugal transfer proteinlarge plasmid CDS127586 372 + 0.567204
NA PSPPH_A0133 shikimate kinaselarge plasmid CDS114025 6456 - 0.626084
NA PSPPH_A0078 large plasmid pseudo65278 1233 - 0.604217
NA PSPPH_A0047 conserved hypothetical protein, fusionlarge plasmid CDS39068 825 - 0.500606
NA PSPPH_A0086 large plasmid pseudo74977 454 - 0.594714
NA PSPPH_A0037 trbC protein, truncatedlarge plasmid CDS30683 294 + 0.632653
NA PSPPH_A0099 GGDEF domain/EAL domain proteinlarge plasmid CDS86076 1950 + 0.550256
NA PSPPH_A0029 GGDEF domain/EAL domain proteinlarge plasmid CDS22914 1950 - 0.550256
NA PSPPH_A0059 conserved hypothetical proteinlarge plasmid CDS48891 228 - 0.565789
NA PSPPH_A0021 conserved hypothetical proteinlarge plasmid CDS18418 288 + 0.548611
NA PSPPH_A0063 fimbrial chaperone protein, periplasmiclarge plasmid CDS51922 738 + 0.498645
NA PSPPH_A0050 ISPsy23, transposition helper protein, truncatedlarge plasmid CDS41923 435 + 0.547126
NA PSPPH_A0006 polygalacturonaselarge plasmid CDS3428 1617 - 0.573284
NA PSPPH_A0005 addiction module toxin, RelE/StbE familylarge plasmid CDS2995 282 + 0.592199
NA PSPPH_A0090 ISPsy21, transposase orfAlarge plasmid CDS78073 324 - 0.57716
NA PSPPH_A0033 trbA protein, truncatedlarge plasmid CDS29010 351 + 0.615385
NA PSPPH_A0091 hypothetical proteinlarge plasmid CDS78948 1326 + 0.381599
NA PSPPH_A0097 ISPsy16, transposaselarge plasmid CDS84470 1035 + 0.576812
NA PSPPH_A0141 ISPsy24, transposase orfBlarge plasmid CDS125028 915 + 0.554098
NA PSPPH_A0112 phosphoglycerate mutase family proteinlarge plasmid CDS95963 648 - 0.449074
NA PSPPH_A0077 conserved hypothetical proteinlarge plasmid CDS64354 450 - 0.513333
NA PSPPH_A0102 YacAlarge plasmid CDS89935 288 + 0.572917
NA PSPPH_A0046 large plasmid pseudo37785 1233 - 0.603406
NA PSPPH_A0095 plasmid stabilization system protein, RelE/ParE familylarge plasmid CDS82685 351 + 0.490029
NA PSPPH_A0148 ParA family proteinlarge plasmid CDS130713 651 + 0.543779
NA PSPPH_A0015 large plasmid pseudo12926 1546 - 0.570505
NA PSPPH_A0084 large plasmid pseudo72979 1080 - 0.569444
NA PSPPH_A0036 large plasmid pseudo30016 681 + 0.580029
NA PSPPH_A0140 transposase, truncatedlarge plasmid CDS124261 708 - 0.533898
NA PSPPH_A0080 methyl-accepting chemotaxis proteinlarge plasmid CDS66931 1578 - 0.520279
NA PSPPH_A0131 large plasmid pseudo111873 596 + 0.605705
NA PSPPH_A0001 hypothetical proteinlarge plasmid CDS134 174 + 0.568965
NA PSPPH_A0088 large plasmid pseudo76913 213 - 0.629108
NA PSPPH_A0089 ISPsy21, transposase orfBlarge plasmid CDS77174 903 - 0.576966
NA PSPPH_A0014 ISPsy18, transposase, truncatedlarge plasmid CDS12234 609 - 0.538588
NA PSPPH_A0017 hypothetical proteinlarge plasmid CDS16178 417 - 0.345324
NA PSPPH_A0070 conserved hypothetical proteinlarge plasmid CDS59577 189 + 0.571429
NA PSPPH_A0034 PIN domain proteinlarge plasmid CDS29350 378 - 0.571429
NA PSPPH_A0142 conserved hypothetical proteinlarge plasmid CDS126280 327 - 0.535168
NA PSPPH_A0085 transposase, truncatedlarge plasmid CDS74169 675 - 0.588148
NA PSPPH_A0042 methyl-accepting chemotaxis proteinlarge plasmid CDS34374 2031 - 0.573117
NA PSPPH_A0028 hypothetical proteinlarge plasmid CDS22314 477 + 0.54717
NA PSPPH_A0134 hypothetical proteinlarge plasmid CDS120489 186 - 0.548387
NA PSPPH_A0096 transposase, truncatedlarge plasmid CDS84195 165 + 0.557576
NA PSPPH_A0024 large plasmid pseudo19301 333 + 0.612613
NA PSPPH_A0048 plasmid partition protein ParA, putativelarge plasmid CDS40090 630 + 0.555556
NA PSPPH_A0081 ISPsy19, transposaselarge plasmid CDS68971 1104 - 0.555254
NA PSPPH_A0039 hypothetical proteinlarge plasmid CDS32669 216 + 0.537037
NA PSPPH_A0129 Yersinia/Haemophilus virulence surface antigen familylarge plasmid CDS110671 972 + 0.531893
NA PSPPH_A0067 hypothetical proteinlarge plasmid CDS56772 432 + 0.453704
NA PSPPH_A0051 conserved hypothetical proteinlarge plasmid CDS42803 252 + 0.59127
NA PSPPH_A0044 ISPsy16, transposase, truncatedlarge plasmid CDS36919 111 + 0.522523
NA PSPPH_A0007 carbon storage regulator related proteinlarge plasmid CDS5059 294 - 0.459184
NA PSPPH_A0026 conserved hypothetical proteinlarge plasmid CDS20380 399 + 0.588972
NA PSPPH_A0055 hypothetical proteinlarge plasmid CDS45495 186 + 0.478495
NA PSPPH_A0147 conjugal transfer proteinlarge plasmid CDS130059 549 + 0.612022
NA PSPPH_A0123 hypothetical proteinlarge plasmid CDS105578 156 - 0.525641
NA PSPPH_A0117 ISPsy2, transposase truncatedlarge plasmid CDS100022 852 - 0.559859
NA PSPPH_A0138 stability/partitioning determinantlarge plasmid CDS122859 705 + 0.504965
NA PSPPH_A0040 hypothetical proteinlarge plasmid CDS32881 633 + 0.560821
NA PSPPH_A0066 hypothetical proteinlarge plasmid CDS55678 588 + 0.460884
NA PSPPH_A0093 site-specific recombinase, phage integrase familylarge plasmid CDS81131 963 - 0.618899
NA PSPPH_A0100 ISPsy19, transposaselarge plasmid CDS88114 1104 + 0.556159
NA PSPPH_A0073 carbon storage regulator relatedlarge plasmid CDS61829 294 - 0.459184
NA PSPPH_A0121 large plasmid pseudo104524 204 + 0.578431
NA PSPPH_A0114 transposase family proteinlarge plasmid CDS97940 243 + 0.567901
NA PSPPH_A0016 membrane protein, putativelarge plasmid CDS14859 1317 - 0.343964
NA PSPPH_A0107 SanC, putativelarge plasmid CDS91909 657 - 0.531202
NA PSPPH_A0025 hypothetical proteinlarge plasmid CDS20056 291 - 0.522337
NA PSPPH_A0038 large plasmid pseudo31210 1233 - 0.603406
NA PSPPH_A0074 hypothetical proteinlarge plasmid CDS62157 183 - 0.453552
NA PSPPH_A0041 large plasmid pseudo33616 96 - 0.552083
NA PSPPH_A0061 ISPsy26, transposase orfBlarge plasmid CDS49604 882 + 0.527211
NA PSPPH_A0124 large plasmid pseudo105780 811 - 0.585697
NA PSPPH_A0094 prevent-host-death family proteinlarge plasmid CDS82424 249 + 0.534137
NA PSPPH_A0082 large plasmid pseudo70665 867 + 0.550173
NA PSPPH_A0109 sulfotransferase, putativelarge plasmid CDS93845 837 - 0.525687
NA PSPPH_A0130 conserved hypothetical proteinlarge plasmid CDS111627 246 - 0.544715
NA PSPPH_A0043 hypothetical proteinlarge plasmid CDS36473 111 + 0.477477
NA PSPPH_A0052 conserved hypothetical protein TIGR00305large plasmid CDS43054 411 + 0.583942
NA PSPPH_A0071 addiction module toxin, RelE/StbE familylarge plasmid CDS59765 282 + 0.592199
NA PSPPH_A0062 LysR-family transcription regulator SinRlarge plasmid CDS50672 999 + 0.523524
NA PSPPH_A0126 hypothetical proteinlarge plasmid CDS106991 120 - 0.491667
NA PSPPH_A0072 polygalacturonaselarge plasmid CDS60198 1617 - 0.573284
NA PSPPH_A0105 carbon storage regulator-related proteinlarge plasmid CDS90889 237 - 0.49789
NA PSPPH_A0002 Replication proteinlarge plasmid CDS385 1233 + 0.609895
NA PSPPH_A0057 large plasmid pseudo48033 501 - 0.560878
NA PSPPH_A0027 Levansucrase (Beta-D-fructofuranosyl transferase)(Sucrose 6-fructosyl transferase)large plasmid CDS20926 1296 - 0.559414
avrB2 PSPPH_A0120 type III effector AvrB2large plasmid CDS102433 1059 - 0.475921
avrD1 PSPPH_A0113 syringolide biosynthetic protein AvrD1large plasmid CDS96851 936 - 0.407051
avrRps4 PSPPH_A0087 type III effector AvrRps4large plasmid CDS75990 666 - 0.525526
bioA2 PSPPH_A0108 Adenosylmethionine-8-amino-7-oxononanoateaminotr ansferaselarge plasmid CDS92602 1260 - 0.530952
hopAB1 PSPPH_A0127 type III effector HopAB1large plasmid CDS107107 1620 - 0.540123
hopAU1 PSPPH_A0031 type III effector HopAU1large plasmid CDS26415 2196 + 0.567395
hopAV1 PSPPH_A0056 type III effector HopAV1large plasmid CDS45673 2394 + 0.599415
hopAW1 PSPPH_A0122 type III effector HopAW1large plasmid CDS104814 657 - 0.47032
hopD1 PSPPH_A0010 type III effector HopD1large plasmid CDS7147 2133 + 0.550867
hopQ1 PSPPH_A0012 type III effector HopQ1large plasmid CDS9395 1344 - 0.50744
hopW1-1 PSPPH_A0009 type III effector HopW1-1, truncatedlarge plasmid CDS6412 285 - 0.536842
hopW1-2 PSPPH_A0075 type III effector HopW1-2, truncatedlarge plasmid CDS63182 285 - 0.536842
stbC PSPPH_A0137 plasmid stability protein StbClarge plasmid CDS122137 258 - 0.577519