Gene list
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Genomic element: pPMA4326A
Number of genes found: 63
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Pseudomonas syringae pv. maculicola, ES4326 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PMA4326A10 | IS222 transposase protein orfB | pPMA4326A | CDS | 8128 | 672 | + | 0.546131 |
NA | PMA4326A12 | hypothetical protein | pPMA4326A | CDS | 9618 | 1032 | - | 0.506783 |
NA | PMA4326A18 | hypothetical protein | pPMA4326A | CDS | 15338 | 387 | - | 0.462532 |
NA | pPMA4326A | stem_loop | 39344 | 27 | + | 0.555556 | ||
NA | PMA4326A07 | hypothetical protein | pPMA4326A | CDS | 6160 | 426 | + | 0.603286 |
NA | pPMA4326A | stem_loop | 12695 | 32 | + | 0.1875 | ||
NA | PMA4326A35 | hypothetical protein | pPMA4326A | CDS | 28493 | 366 | + | 0.598361 |
NA | pPMA4326A | stem_loop | 46411 | 34 | + | 0.647059 | ||
NA | PMA4326A08 | hypothetical protein | pPMA4326A | CDS | 7102 | 363 | + | 0.465565 |
NA | PMA4326A37 | hypothetical protein | pPMA4326A | CDS | 30074 | 1017 | + | 0.509341 |
NA | pPMA4326A | misc_feature | 39285 | 9 | + | 0.666667 | ||
NA | pPMA4326A | stem_loop | 15260 | 26 | + | 0.576923 | ||
NA | PMA4326A09 | IS222 transposase protein orfA | pPMA4326A | CDS | 7637 | 309 | + | 0.553398 |
NA | MFA03 | pPMA4326A | pseudo | 29919 | 90 | + | 0.588889 | |
NA | PMA4326A48 | hypothetical protein | pPMA4326A | CDS | 44072 | 156 | + | 0.551282 |
NA | PMA4326A11 | hypothetical protein | pPMA4326A | CDS | 9338 | 204 | - | 0.534314 |
NA | PMA4326A42 | single-stranded binding protein | pPMA4326A | CDS | 36474 | 561 | + | 0.609626 |
NA | PMA4326A45 | hypothetical protein | pPMA4326A | CDS | 38683 | 420 | - | 0.504762 |
NA | MFA01 | pPMA4326A | pseudo | 2630 | 462 | + | 0.556277 | |
NA | PMA4326A40 | topoisomerase | pPMA4326A | CDS | 33730 | 2166 | + | 0.608495 |
NA | PMA4326A50 | hypothetical protein | pPMA4326A | CDS | 45136 | 921 | + | 0.57329 |
NA | PMA4326A06 | hypothetical protein | pPMA4326A | CDS | 5804 | 324 | + | 0.506173 |
NA | PMA4326A17 | IS1406 transposase | pPMA4326A | CDS | 14012 | 978 | + | 0.575665 |
NA | PMA4326A49 | transcriptional regulator | pPMA4326A | CDS | 44372 | 429 | + | 0.617716 |
NA | PMA4326A46 | relaxosome component | pPMA4326A | CDS | 39444 | 726 | + | 0.486226 |
NA | PMA4326A22 | hypothetical protein | pPMA4326A | CDS | 17732 | 216 | + | 0.421296 |
NA | PMA4326A28 | hypothetical protein | pPMA4326A | CDS | 22897 | 234 | + | 0.461538 |
NA | PMA4326A21 | transcriptional regulator | pPMA4326A | CDS | 17139 | 528 | + | 0.422348 |
NA | PMA4326A04 | hypothetical protein | pPMA4326A | CDS | 3427 | 471 | - | 0.501062 |
NA | PMA4326A15 | stability/partitioning determinant | pPMA4326A | CDS | 12794 | 654 | + | 0.484709 |
NA | PMA4326A05 | hypothetical protein | pPMA4326A | CDS | 4895 | 420 | + | 0.6 |
NA | PMA4326A36 | hypothetical protein | pPMA4326A | CDS | 29219 | 267 | + | 0.543071 |
NA | pPMA4326A | misc_feature | 4209 | 619 | + | 0.487884 | ||
NA | PMA4326A20 | pbsX-like transcriptional regulator | pPMA4326A | CDS | 16524 | 351 | - | 0.512821 |
NA | pPMA4326A | misc_signal | 7894 | 8 | + | 0.25 | ||
NA | PMA4326A47 | relaxase | pPMA4326A | CDS | 40159 | 3738 | + | 0.579187 |
NA | PMA4326A44 | hypothetical protein | pPMA4326A | CDS | 38092 | 573 | + | 0.474695 |
NA | MFA04 | pPMA4326A | pseudo | 37088 | 198 | + | 0.671717 | |
NA | pPMA4326A | stem_loop | 46452 | 35 | + | 0.485714 | ||
NA | PMA4326A03 | GNAT acetyltransferase | pPMA4326A | CDS | 1946 | 306 | + | 0.493464 |
NA | PMA4326A13 | hypothetical protein | pPMA4326A | CDS | 10727 | 921 | - | 0.500543 |
IS1406 | pPMA4326A | repeat_region | 13925 | 1211 | + | 0.569777 | ||
IS222 | pPMA4326A | repeat_region | 7575 | 1231 | + | 0.547522 | ||
PMA4326A41 | hypothetical protein | pPMA4326A | CDS | 35892 | 555 | + | 0.578378 | |
bip | PMA4326A19 | bacteriocin immunity protein | pPMA4326A | CDS | 15966 | 471 | - | 0.377919 |
kikA | PMA4326A39 | killer protein | pPMA4326A | CDS | 33340 | 363 | + | 0.619835 |
repA | PMA4326A01 | replication protein | pPMA4326A | CDS | 1 | 1311 | + | 0.601831 |
ssb | PMA4326A02 | single-stranded binding protein | pPMA4326A | CDS | 1514 | 288 | + | 0.53125 |
stbA | PMA4326A14 | stability/partitioning determinant | pPMA4326A | CDS | 11795 | 642 | - | 0.580997 |
stbB | PMA4326A43 | stability/partitioning determinant | pPMA4326A | CDS | 37376 | 720 | + | 0.468056 |
virB1 | PMA4326A23 | VirB1 | pPMA4326A | CDS | 17976 | 699 | + | 0.599428 |
virB10 | PMA4326A33 | VirB10 | pPMA4326A | CDS | 26204 | 1212 | + | 0.608911 |
virB11 | PMA4326A34 | VirB11 | pPMA4326A | CDS | 27425 | 1059 | + | 0.614731 |
virB2 | PMA4326A24 | VirB2 | pPMA4326A | CDS | 18671 | 339 | + | 0.622419 |
virB3 | PMA4326A25 | VirB3 | pPMA4326A | CDS | 19022 | 477 | + | 0.563941 |
virB4 | PMA4326A26 | VirB4 | pPMA4326A | CDS | 19359 | 2553 | + | 0.580102 |
virB5 | PMA4326A27 | VirB5 | pPMA4326A | CDS | 21908 | 687 | + | 0.576419 |
virB6 | PMA4326A29 | VirB6 | pPMA4326A | CDS | 23141 | 933 | + | 0.540193 |
virB7 | PMA4326A30 | VirB7 | pPMA4326A | CDS | 24141 | 315 | + | 0.653968 |
virB8 | PMA4326A31 | VirB8 | pPMA4326A | CDS | 24492 | 789 | + | 0.583016 |
virB9 | PMA4326A32 | VirB9 | pPMA4326A | CDS | 25270 | 810 | + | 0.616049 |
virD4 | PMA4326A38 | VirD4 | pPMA4326A | CDS | 31626 | 1674 | + | 0.591995 |
yafA | PMA4326A16 | stability/partitioning determinant | pPMA4326A | CDS | 13469 | 339 | + | 0.466077 |