Gene list
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Genomic element: pEST4011
Number of genes found: 128
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Achromobacter denitrificans, EST4002 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pEST4011 | protein_bind | 6054 | 10 | + | 0.2 | |||
NA | pEST4011 | protein_bind | 4658 | 12 | + | 0.333333 | |||
NA | pEST4011 | misc_feature | 5683 | 20 | + | 0.8 | |||
NA | pEST4011 | protein_bind | 2313 | 12 | + | 0.333333 | |||
NA | pEST4011 | protein_bind | 4689 | 15 | + | 0.333333 | |||
NA | pEST4011 | protein_bind | 9285 | 21 | - | 0.619048 | |||
NA | pEST4011 | protein_bind | 9415 | 9 | + | 0.333333 | |||
NA | pEST4011 | repeat_region | 12042 | 21 | + | 0.52381 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 28608 | 1014 | - | 0.613412 | |
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 31042 | 630 | + | 0.64127 | |
NA | pEST4011 | protein_bind | 8401 | 10 | + | 0.2 | |||
NA | pEST4011 | misc_feature | 34325 | 6991 | + | 0.620512 | |||
NA | pEST4011 | misc_feature | 8790 | 803 | + | 0.581569 | |||
NA | pEST4011 | protein_bind | 60176 | 21 | - | 0.47619 | |||
NA | pEST4011 | protein_bind | 9536 | 21 | - | 0.571429 | |||
NA | pEST4011 | protein_bind | 8372 | 19 | + | 0.421053 | |||
NA | pEST4011 | protein_bind | 9429 | 9 | - | 0.333333 | |||
NA | pEST4011 | protein_bind | 9307 | 21 | - | 0.47619 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 367 | 609 | - | 0.587849 | |
NA | pEST4011 | protein_bind | 8412 | 13 | + | 0.384615 | |||
NA | pEST4011 | misc_feature | 74354 | 100 | + | 0.48 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 972 | 189 | - | 0.677249 | |
NA | pEST4011 | protein_bind | 61824 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 6137 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 9403 | 9 | + | 0.333333 | |||
NA | pEST4011 | protein_bind | 69453 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 60146 | 21 | - | 0.619048 | |||
NA | pEST4011 | repeat_region | 9700 | 110 | + | 0.472727 | |||
NA | pEST4011 | operon | 20678 | 5243 | - | 0.603471 | |||
NA | pEST4011 | repeat_region | 15568 | 16 | + | 0.5 | |||
NA | pEST4011 | protein_bind | 71848 | 14 | + | 0.571429 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 52526 | 816 | + | 0.653186 | |
NA | pEST4011 | protein_bind | 74410 | 5 | + | 0.6 | |||
NA | pEST4011 | protein_bind | 74273 | 13 | + | 0.384615 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 14087 | 789 | + | 0.619772 | |
NA | pEST4011 | protein_bind | 74493 | 14 | + | 0.428571 | |||
NA | pEST4011 | misc_feature | 74367 | 40 | + | 0.45 | |||
NA | pEST4011 | protein_bind | 71867 | 14 | + | 0.357143 | |||
NA | pEST4011 | protein_bind | 2328 | 15 | + | 0.333333 | |||
NA | pEST4011 | mRNA | 20678 | 5243 | - | 0.603471 | |||
NA | pEST4011 | repeat_region | 16737 | 16 | + | 0.5625 | |||
NA | pEST4011 | protein_bind | 61384 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 9501 | 21 | - | 0.619048 | |||
NA | pEST4011 | protein_bind | 9375 | 21 | - | 0.47619 | |||
NA | pEST4011 | protein_bind | 73857 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 61253 | 14 | + | 0.5 | |||
NA | pEST4011 | misc_feature | 9076 | 15 | + | 0.8 | |||
NA | pEST4011 | protein_bind | 62004 | 14 | + | 0.357143 | |||
NA | pEST4011 | protein_bind | 8752 | 17 | + | 0.470588 | |||
NA | pEST4011 | protein_bind | 9557 | 21 | - | 0.666667 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 51534 | 741 | - | 0.596491 | |
NA | pEST4011 | protein_bind | 9583 | 10 | + | 0.4 | |||
NA | pEST4011 | protein_bind | 6025 | 16 | + | 0.5 | |||
NA | pEST4011 | protein_bind | 61353 | 10 | + | 0.2 | |||
NA | pEST4011 | protein_bind | 9329 | 21 | - | 0.571429 | |||
NA | pEST4011 | misc_feature | 74414 | 2 | + | 1 | |||
NA | pEST4011 | misc_feature | 9129 | 21 | + | 0.714286 | |||
NA | pEST4011 | repeat_region | 13909 | 111 | + | 0.513514 | |||
NA | pEST4011 | protein_bind | 8790 | 21 | + | 0.47619 | |||
NA | pEST4011 | misc_feature | 8945 | 15 | + | 0.8 | |||
NA | pEST4011 | protein_bind | 74391 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 76948 | 13 | + | 0.384615 | |||
NA | pEST4011 | protein_bind | 9352 | 21 | - | 0.619048 | |||
NA | pEST4011 | repeat_region | 13132 | 23 | + | 0.347826 | |||
NA | unknown | SubName: Full=Uncharacterized protein; | pEST4011 | CDS | 14479 | 366 | - | 0.647541 | |
IS1071 | pEST4011 | repeat_region | 9700 | 4320 | + | 0.576389 | |||
IS1071::1471 | pEST4011 | repeat_region | 53315 | 4320 | + | 0.575926 | |||
IS1471 | pEST4011 | repeat_region | 12042 | 1113 | + | 0.539982 | |||
ISBPH | pEST4011 | repeat_region | 15568 | 1185 | + | 0.636287 | |||
ccp | Ccp | SubName: Full=Ccp; | pEST4011 | CDS | 31951 | 1332 | - | 0.638138 | |
citG | CitG | RecName: Full=Probable 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase; Short=2-(5-triphosphoribosyl)-3-dephospho-CoA synthase; EC=2.4.2.52; | pEST4011 | CDS | 49460 | 873 | + | 0.702176 | |
iaaH | IaaH | SubName: Full=IaaH; | pEST4011 | CDS | 27014 | 1422 | - | 0.680731 | |
incC1 | IncC1 | SubName: Full=IncC1; | pEST4011 | CDS | 3506 | 1092 | - | 0.612637 | |
incC2 | IncC2 | SubName: Full=IncC2; | pEST4011 | CDS | 3506 | 774 | - | 0.624031 | |
kfrA | KfrA | SubName: Full=KfrA; | pEST4011 | CDS | 1225 | 1017 | - | 0.705015 | |
klcA | KlcA | SubName: Full=KlcA; | pEST4011 | CDS | 7884 | 435 | - | 0.629885 | |
klcB | KlcB | SubName: Full=KlcB; | pEST4011 | CDS | 6430 | 1407 | - | 0.660981 | |
kleA | KleA | SubName: Full=KleA; | pEST4011 | CDS | 5710 | 258 | - | 0.604651 | |
kleE | KleE | SubName: Full=KleE; | pEST4011 | CDS | 5270 | 324 | - | 0.611111 | |
kleF | KleF | SubName: Full=KleF; | pEST4011 | CDS | 4747 | 522 | - | 0.6341 | |
korA | KorA | SubName: Full=KorA; | pEST4011 | CDS | 4276 | 309 | - | 0.582524 | |
korB | KorB | SubName: Full=KorB; | pEST4011 | CDS | 2436 | 1074 | - | 0.640596 | |
korC | KorC | SubName: Full=KorC; | pEST4011 | CDS | 6158 | 258 | - | 0.639535 | |
lrp | Lrp | SubName: Full=Lrp; | pEST4011 | CDS | 33793 | 510 | - | 0.586275 | |
mdcA | MdcA | SubName: Full=MdcA; | pEST4011 | CDS | 45142 | 1683 | + | 0.693405 | |
mdcB | MdcB | SubName: Full=MdcB; | pEST4011 | CDS | 47157 | 894 | + | 0.711409 | |
mdcC | MdcC | SubName: Full=MdcC; | pEST4011 | CDS | 48061 | 702 | + | 0.713675 | |
mdcD | MdcD | SubName: Full=MdcD; | pEST4011 | CDS | 46834 | 327 | + | 0.715596 | |
mdcE | MdcE | SubName: Full=MdcE; | pEST4011 | CDS | 48771 | 693 | + | 0.722944 | |
mdcH | MdcH | SubName: Full=MdcH; | pEST4011 | CDS | 50329 | 909 | + | 0.708471 | |
putA | PutA | SubName: Full=PutA; | pEST4011 | CDS | 41332 | 3801 | + | 0.637727 | |
tfdA | TfdA | SubName: Full=TfdA; | pEST4011 | CDS | 19666 | 864 | - | 0.575231 | |
tfdB | TfdB | SubName: Full=TfdB; | pEST4011 | CDS | 22168 | 1758 | - | 0.620592 | |
tfdC | pEST4011 | -35_signal | 25951 | 6 | - | 0.333333 | |||
tfdC | pEST4011 | -10_signal | 25927 | 6 | - | 0.333333 | |||
tfdC | TfdC | SubName: Full=TfdC; | pEST4011 | CDS | 24867 | 762 | - | 0.581365 | |
tfdD | TfdD | SubName: Full=TfdD; | pEST4011 | CDS | 29623 | 1113 | - | 0.597484 | |
tfdE | TfdE | SubName: Full=TfdE; | pEST4011 | CDS | 24140 | 708 | - | 0.612994 | |
tfdF | TfdF | SubName: Full=TfdF; | pEST4011 | CDS | 16766 | 1074 | - | 0.611732 | |
tfdK | TfdK | pEST4011 | CDS | 20678 | 1392 | - | 0.594828 | ||
tfdR | pEST4011 | -35_signal | 25926 | 6 | + | 0.5 | |||
tfdR | TfdR | pEST4011 | mRNA | 25961 | 1000 | + | 0.623 | ||
tfdR | pEST4011 | protein_bind | 25978 | 15 | + | 0.4 | |||
tfdR | TfdR | SubName: Full=TfdR; | pEST4011 | CDS | 26046 | 915 | + | 0.637158 | |
tfdR | pEST4011 | -10_signal | 25949 | 6 | + | 0.5 | |||
tnpA | TnpA | SubName: Full=TnpA; | pEST4011 | CDS | 12062 | 1038 | - | 0.54817 | |
tnpBPH | TnpBPH | SubName: Full=TnpBPH; | pEST4011 | CDS | 15612 | 984 | + | 0.643293 | |
traC2 | TraC2 | SubName: Full=TraC2; | pEST4011 | CDS | 65130 | 1488 | - | 0.650538 | |
traC3 | TraC3 | SubName: Full=TraC3; | pEST4011 | CDS | 65130 | 813 | - | 0.634686 | |
traD | TraD | SubName: Full=TraD; | pEST4011 | CDS | 66621 | 378 | - | 0.693122 | |
traE | TraE | SubName: Full=TraE; | pEST4011 | CDS | 67003 | 2193 | - | 0.623803 | |
traF | TraF | SubName: Full=TraF; | pEST4011 | CDS | 69204 | 537 | - | 0.633147 | |
traG | TraG | SubName: Full=TraG; | pEST4011 | CDS | 69737 | 1914 | - | 0.632184 | |
traH | TraH | SubName: Full=TraH; | pEST4011 | CDS | 71946 | 327 | - | 0.629969 | |
traI | TraI | SubName: Full=TraI; | pEST4011 | CDS | 71647 | 2193 | - | 0.628819 | |
traJ | TraJ | SubName: Full=TraJ; | pEST4011 | CDS | 73874 | 390 | - | 0.612821 | |
traK | TraK | SubName: Full=TraK; | pEST4011 | CDS | 74655 | 399 | + | 0.591479 | |
traL | TraL | SubName: Full=TraL; | pEST4011 | CDS | 75053 | 726 | + | 0.586777 | |
traM | TraM | SubName: Full=TraM; | pEST4011 | CDS | 75778 | 438 | + | 0.641553 | |
traX | TraX | SubName: Full=TraX; | pEST4011 | CDS | 73836 | 42 | - | 0.547619 | |
trbA | TrbA | SubName: Full=TrbA; | pEST4011 | CDS | 61431 | 378 | + | 0.544974 | |
trbB | TrbB | SubName: Full=TrbB; | pEST4011 | CDS | 62060 | 963 | + | 0.599169 | |
trbC | TrbC | SubName: Full=TrbC; | pEST4011 | CDS | 63034 | 429 | + | 0.622378 | |
trbD | TrbD | SubName: Full=TrbD; | pEST4011 | CDS | 63465 | 312 | + | 0.586538 | |
trbE | TrbE | SubName: Full=TrbE; | pEST4011 | CDS | 63773 | 1374 | + | 0.606987 | |
trfA | TrfA | SubName: Full=TrfA; | pEST4011 | CDS | 60241 | 870 | - | 0.596552 | |
upf54.4 | Upf54.4 | SubName: Full=Upf54.4; | pEST4011 | CDS | 76304 | 630 | - | 0.647619 | |
upf54.8 | Upf54.8 | SubName: Full=Upf54.8; | pEST4011 | CDS | 6 | 345 | - | 0.544928 |