Gene list
Applied filters:
Genomic element: pO157
Number of genes found: 187
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli O157:H7, EDL933 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pO157 | promoter | 87558 | 30 | + | 0.266667 | ||
NA | pO157 | repeat_region | 48285 | 21 | + | 0.428571 | ||
NA | pO157 | promoter | 8073 | 30 | + | 0.533333 | ||
NA | pO157 | misc_feature | 2240 | 88 | - | 0.545455 | ||
NA | pO157 | repeat_region | 77768 | 490 | + | 0.497959 | ||
NA | pO157 | repeat_region | 73032 | 60 | + | 0.55 | ||
NA | pO157 | promoter | 47064 | 29 | + | 0.172414 | ||
NA | pO157 | -10_signal | 2439 | 7 | + | 0.428571 | ||
NA | pO157 | misc_feature | 38737 | 36 | + | 0.472222 | ||
NA | pO157 | promoter | 6167 | 30 | - | 0.466667 | ||
NA | pO157 | repeat_region | 47890 | 21 | + | 0.380952 | ||
NA | pO157 | promoter | 34145 | 30 | + | 0.6 | ||
NA | pO157 | rep_origin | 4084 | 149 | + | 0.355705 | ||
NA | pO157 | promoter | 77734 | 30 | + | 0.533333 | ||
NA | pO157 | repeat_region | 5986 | 682 | - | 0.51173 | ||
NA | pO157 | repeat_region | 57622 | 130 | + | 0.538462 | ||
NA | pO157 | promoter | 54529 | 28 | + | 0.392857 | ||
NA | pO157 | repeat_region | 9831 | 1273 | + | 0.504321 | ||
NA | pO157 | RBS | 72943 | 9 | + | 0.555556 | ||
NA | pO157 | repeat_region | 54552 | 27 | + | 0.62963 | ||
NA | pO157 | repeat_region | 49703 | 21 | - | 0.285714 | ||
NA | pO157 | promoter | 17906 | 29 | + | 0.275862 | ||
NA | pO157 | promoter | 26426 | 29 | + | 0.310345 | ||
NA | pO157 | promoter | 11225 | 28 | + | 0.178571 | ||
NA | pO157 | promoter | 653 | 29 | + | 0.344828 | ||
NA | pO157 | promoter | 46416 | 30 | + | 0.233333 | ||
NA | pO157 | promoter | 42736 | 29 | + | 0.275862 | ||
NA | pO157 | promoter | 22915 | 30 | + | 0.233333 | ||
NA | pO157 | repeat_region | 15426 | 501 | + | 0.49501 | ||
NA | pO157 | misc_feature | 4521 | 150 | - | 0.6 | ||
NA | pO157 | promoter | 78518 | 29 | + | 0.275862 | ||
NA | pO157 | promoter | 7134 | 28 | - | 0.464286 | ||
NA | pO157 | promoter | 6753 | 28 | - | 0.571429 | ||
NA | pO157 | repeat_region | 5661 | 1555 | + | 0.524759 | ||
NA | pO157 | repeat_region | 48460 | 21 | + | 0.380952 | ||
NA | pO157 | promoter | 44726 | 28 | + | 0.25 | ||
NA | pO157 | promoter | 39216 | 29 | + | 0.275862 | ||
NA | pO157 | repeat_region | 49766 | 21 | - | 0.428571 | ||
NA | pO157 | misc_feature | 4072 | 9 | + | 0.333333 | ||
NA | pO157 | repeat_region | 48333 | 21 | + | 0.333333 | ||
NA | pO157 | RBS | 2473 | 6 | + | 0.666667 | ||
NA | pO157 | repeat_region | 53269 | 1310 | + | 0.539695 | ||
NA | pO157 | promoter | 7323 | 28 | + | 0.285714 | ||
NA | pO157 | promoter | 73746 | 30 | + | 0.5 | ||
NA | pO157 | promoter | 60631 | 28 | + | 0.392857 | ||
NA | pO157 | repeat_region | 88476 | 424 | + | 0.518868 | ||
NA | pO157 | repeat_region | 77032 | 733 | + | 0.472033 | ||
NA | pO157 | promoter | 74309 | 30 | + | 0.533333 | ||
NA | pO157 | promoter | 91037 | 30 | + | 0.5 | ||
NA | pO157 | promoter | 4169 | 29 | + | 0.310345 | ||
NA | pO157 | misc_feature | 37521 | 36 | + | 0.5 | ||
NA | pO157 | -35_signal | 2416 | 6 | + | 0.666667 | ||
NA | pO157 | promoter | 1390 | 30 | + | 0.433333 | ||
NA | pO157 | repeat_region | 49680 | 21 | - | 0.380952 | ||
NA | pO157 | promoter | 1025 | 28 | + | 0.25 | ||
NA | pO157 | RBS | 3032 | 4 | + | 0.5 | ||
NA | pO157 | promoter | 88850 | 28 | + | 0.392857 | ||
NA | pO157 | repeat_region | 88137 | 212 | + | 0.54717 | ||
NA | pO157 | promoter | 4764 | 30 | + | 0.233333 | ||
NA | pO157 | misc_feature | 69237 | 447 | + | 0.615213 | ||
NA | pO157 | promoter | 84137 | 30 | + | 0.266667 | ||
NA | pO157 | promoter | 1899 | 29 | + | 0.206897 | ||
NA | pO157 | misc_feature | 3847 | 249 | + | 0.522088 | ||
NA | pO157 | repeat_region | 37521 | 1252 | + | 0.507188 | ||
NA | pO157 | repeat_region | 54827 | 248 | + | 0.415323 | ||
NA | pO157 | repeat_region | 49745 | 21 | - | 0.285714 | ||
NA | pO157 | promoter | 69611 | 30 | - | 0.5 | ||
NA | pO157 | repeat_region | 48315 | 21 | + | 0.380952 | ||
NA | pO157 | repeat_region | 48500 | 21 | + | 0.285714 | ||
NA | pO157 | promoter | 51825 | 29 | + | 0.310345 | ||
NA | pO157 | promoter | 10089 | 28 | + | 0.535714 | ||
NA | pO157 | repeat_region | 53269 | 27 | + | 0.592593 | ||
NA | pO157 | repeat_region | 49724 | 21 | - | 0.285714 | ||
NA | pO157 | repeat_region | 48530 | 21 | - | 0.333333 | ||
NA | pO157 | promoter | 16606 | 29 | + | 0.482759 | ||
NA | pO157 | promoter | 37539 | 28 | + | 0.5 | ||
NA | pO157 | promoter | 17290 | 30 | + | 0.266667 | ||
NA | pO157 | promoter | 2754 | 29 | + | 0.344828 | ||
EHEC-hlyA | hemolysin toxin protein | pO157 | CDS | 39822 | 2997 | + | 0.39306 | |
EHEC-hlyB | hemolysin transport protein | pO157 | CDS | 42868 | 2121 | + | 0.37388 | |
EHEC-hlyC | hemolysin transport protein | pO157 | CDS | 39305 | 516 | + | 0.348837 | |
EHEC-hlyD | hemolysin transport protein | pO157 | CDS | 44992 | 1440 | + | 0.365972 | |
L7002 | unknown | pO157 | CDS | 698 | 252 | + | 0.587302 | |
L7003 | hypothetical protein 15.6 kDa protein in finO 3' region precursor | pO157 | CDS | 1151 | 462 | + | 0.491342 | |
L7004 | putative hemolysin expression modulating protein | pO157 | CDS | 1658 | 210 | + | 0.357143 | |
L7005 | hypothetical protein | pO157 | CDS | 1905 | 339 | + | 0.486726 | |
L7007 | replication initiation protein | pO157 | CDS | 2973 | 75 | + | 0.48 | |
L7009 | replication protein | pO157 | CDS | 4259 | 195 | + | 0.54359 | |
L7010 | unknown | pO157 | CDS | 4810 | 285 | + | 0.547368 | |
L7011 | pO157 | misc_feature | 5139 | 5 | + | |||
L7011 | hypothetical protein | pO157 | CDS | 5094 | 276 | + | 0.485507 | |
L7012 | unknown | pO157 | CDS | 5440 | 288 | - | 0.340278 | |
L7013 | transposase (partial) | pO157 | CDS | 5755 | 222 | - | 0.536036 | |
L7014 | hypothetical protein | pO157 | CDS | 6029 | 735 | - | 0.519728 | |
L7015 | transposase | pO157 | CDS | 6547 | 510 | - | 0.558824 | |
L7016 | unknown | pO157 | CDS | 7041 | 240 | + | 0.529167 | |
L7018 | hypothetical protein | pO157 | CDS | 9627 | 390 | + | 0.379487 | |
L7019 | transposase | pO157 | CDS | 10174 | 888 | + | 0.536036 | |
L7021 | unknown | pO157 | CDS | 15307 | 108 | - | 0.435185 | |
L7023 | hypothetical protein | pO157 | CDS | 16148 | 150 | - | 0.486667 | |
L7024 | regulatory protein | pO157 | CDS | 16587 | 135 | + | 0.474074 | |
L7025 | unknown | pO157 | CDS | 16882 | 174 | + | 0.442529 | |
L7026 | hypothetical protein | pO157 | CDS | 17323 | 822 | + | 0.456204 | |
L7027 | hypothetical protein | pO157 | CDS | 18147 | 1104 | + | 0.508152 | |
L7028 | hypothetical protein | pO157 | CDS | 19340 | 1722 | + | 0.479094 | |
L7029 | putative acyltransferase | pO157 | CDS | 21102 | 1032 | + | 0.475775 | |
L7030 | unknown | pO157 | CDS | 22421 | 174 | + | 0.45977 | |
L7031 | hypothetical protein | pO157 | CDS | 23016 | 2697 | + | 0.447905 | |
L7045 | hypothetical protein | pO157 | CDS | 37557 | 342 | + | 0.450292 | |
L7046 | ORFB of IS911 | pO157 | CDS | 37943 | 822 | + | 0.530414 | |
L7051 | hypothetical protein | pO157 | CDS | 46498 | 195 | + | 0.271795 | |
L7052 | hypothetical protein | pO157 | CDS | 46722 | 285 | + | 0.333333 | |
L7053 | hypothetical serine-threonine protein kinase | pO157 | CDS | 47175 | 231 | + | 0.437229 | |
L7054 | replication protein | pO157 | CDS | 47910 | 357 | + | 0.585434 | |
L7055 | replication protein | pO157 | CDS | 47955 | 318 | - | 0.584906 | |
L7056 | replication protein | pO157 | CDS | 48551 | 954 | - | 0.525157 | |
L7057 | replication protein | pO157 | CDS | 49266 | 330 | + | 0.49697 | |
L7058 | hypothetical protein | pO157 | CDS | 49936 | 237 | - | 0.510549 | |
L7059 | hypothetical protein | pO157 | CDS | 50133 | 621 | - | 0.521739 | |
L7060 | hypothetical protein | pO157 | CDS | 50750 | 684 | - | 0.69152 | |
L7061 | hypothetical protein | pO157 | CDS | 51489 | 195 | + | 0.502564 | |
L7066 | hypothetical protein | pO157 | CDS | 54198 | 327 | - | 0.541284 | |
L7067 | Rep protein E1 | pO157 | CDS | 54669 | 156 | + | 0.49359 | |
L7070 | hypothetical protein | pO157 | CDS | 57934 | 273 | + | 0.615385 | |
L7071 | unknown | pO157 | CDS | 58290 | 297 | - | 0.498316 | |
L7072 | unknown | pO157 | CDS | 58849 | 1725 | + | 0.470725 | |
L7073 | unknown | pO157 | CDS | 60650 | 903 | + | 0.547065 | |
L7074 | hypothetical protein | pO157 | CDS | 61938 | 684 | + | 0.571637 | |
L7075 | unknown | pO157 | CDS | 62737 | 555 | + | 0.565766 | |
L7076 | unknown | pO157 | CDS | 63337 | 777 | + | 0.611326 | |
L7077 | unknown | pO157 | CDS | 64531 | 426 | + | 0.542253 | |
L7078 | unknown | pO157 | CDS | 65003 | 423 | + | 0.555556 | |
L7079 | unknown | pO157 | CDS | 65583 | 531 | - | 0.619586 | |
L7080 | unknown | pO157 | CDS | 66627 | 261 | - | 0.609195 | |
L7081 | unknown | pO157 | CDS | 66891 | 1362 | + | 0.571219 | |
L7082 | unknown | pO157 | CDS | 68299 | 564 | + | 0.586879 | |
L7083 | unknown | pO157 | CDS | 68948 | 456 | - | 0.600877 | |
L7085 | hypothetical protein | pO157 | CDS | 70187 | 261 | + | 0.517241 | |
L7086 | hypothetical protein | pO157 | CDS | 70453 | 2019 | + | 0.583952 | |
L7091 | putative nickase | pO157 | CDS | 74290 | 1974 | + | 0.519757 | |
L7092 | hypothetical protein | pO157 | CDS | 76331 | 432 | + | 0.444444 | |
L7093 | putative transposase | pO157 | CDS | 77322 | 360 | - | 0.511111 | |
L7094 | transposase | pO157 | CDS | 77863 | 411 | + | 0.50365 | |
L7095 | putative cytotoxin | pO157 | CDS | 78542 | 9510 | + | 0.313775 | |
L7096 | putative transposase | pO157 | CDS | 88143 | 273 | + | 0.534799 | |
L7097 | hypothetical protein | pO157 | CDS | 88342 | 504 | - | 0.517857 | |
ccdA | plasmid maintenance protein | pO157 | CDS | 51892 | 219 | + | 0.506849 | |
ccdB | plasmid maintenance protein | pO157 | CDS | 52112 | 306 | + | 0.503268 | |
cpb2 | CopB protein (RepA2 protein) | pO157 | CDS | 2483 | 255 | + | 0.439216 | |
espP | putative exoprotein-precursor | pO157 | CDS | 11242 | 3903 | + | 0.442993 | |
etpC | type II secretion protein | pO157 | CDS | 25799 | 876 | + | 0.423516 | |
etpD | type II secretion protein | pO157 | CDS | 26714 | 1929 | + | 0.503888 | |
etpE | type II secretion protein | pO157 | CDS | 28642 | 1506 | + | 0.536521 | |
etpF | type II secretion protein | pO157 | CDS | 30149 | 1224 | + | 0.565359 | |
etpG | type II secretion protein | pO157 | CDS | 31403 | 435 | + | 0.514943 | |
etpH | type II secretion protein | pO157 | CDS | 31834 | 555 | + | 0.533333 | |
etpI | type II secretion protein | pO157 | CDS | 32385 | 366 | + | 0.579235 | |
etpJ | type II secretion protein | pO157 | CDS | 32747 | 600 | + | 0.548333 | |
etpK | type II secretion protein | pO157 | CDS | 33343 | 978 | + | 0.53681 | |
etpL | type II secretion protein | pO157 | CDS | 34254 | 1278 | + | 0.56651 | |
etpM | type II secretion protein | pO157 | CDS | 35518 | 513 | + | 0.530214 | |
etpN | type II secretion protein | pO157 | CDS | 36088 | 834 | + | 0.527578 | |
etpO | type II secretion protein | pO157 | CDS | 37013 | 402 | + | 0.447761 | |
finO | fertility inhibition protein (conjugal transfer repressor) | pO157 | CDS | 1 | 561 | + | 0.566845 | |
flmA | stable plasmid inheritance protein | pO157 | CDS | 73950 | 159 | + | 0.471698 | |
flmB | pO157 | misc_RNA | 73798 | 104 | + | 0.490385 | ||
flmC | hypothetical protein | pO157 | CDS | 73892 | 213 | + | 0.483568 | |
insA | transposase | pO157 | CDS | 15609 | 273 | - | 0.494505 | |
katP | EHEC-catalase/peroxidase | pO157 | CDS | 7373 | 2211 | + | 0.456807 | |
psb1 | putative regulator of SOS induction | pO157 | CDS | 72523 | 438 | + | 0.570776 | |
psiA | hypothetical protein | pO157 | CDS | 72957 | 762 | + | 0.589239 | |
redF | resolvase (protein d) | pO157 | CDS | 52418 | 807 | + | 0.568773 | |
rep2 | replication initiation protein | pO157 | CDS | 3040 | 858 | + | 0.575758 | |
sopA | pO157 | RBS | 55400 | 4 | + | 0.5 | ||
sopA | pO157 | -10_signal | 55370 | 6 | + | |||
sopA | plasmid partitioning protein | pO157 | CDS | 55412 | 1167 | + | 0.471294 | |
sopA | pO157 | -35_signal | 55347 | 6 | + | 0.333333 | ||
sopB | plasmid partitioning protein | pO157 | CDS | 56578 | 972 | + | 0.459877 | |
sopB | pO157 | -10_signal | 56533 | 6 | + | 0.166667 | ||
sopB | pO157 | -35_signal | 56508 | 6 | + | 0.166667 | ||
sopB | pO157 | RBS | 56565 | 7 | + | 0.571429 | ||
sopB | pO157 | terminator | 57603 | 25 | + | 0.56 | ||
ssb | single strand binding protein | pO157 | CDS | 69666 | 492 | + | 0.575203 | |
tra6 | transposase | pO157 | CDS | 53311 | 891 | - | 0.539843 | |
traI | DNA helicase | pO157 | CDS | 88992 | 1299 | + | 0.618938 | |
traX | acetylase for F pilin | pO157 | CDS | 90310 | 747 | + | 0.580991 | |
ypt2 | hypothetical protein 31.7 kDa protein in traX-finO intergenic region | pO157 | CDS | 91115 | 861 | + | 0.444832 |