Gene list
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Genomic element: pPMA4326B
Number of genes found: 54
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Pseudomonas syringae pv. maculicola, ES4326 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PMA4326B18 | MFS sugar transporter | SubName: Full=MFS sugar transporter; | pPMA4326B | CDS | 23898 | 1416 | + | 0.602401 |
NA | MFB02 | pPMA4326B | pseudo | 5094 | 163 | - | 0.521472 | ||
NA | pPMA4326B | misc_feature | 9898 | 299 | + | 0.478261 | |||
NA | PMA4326B12 | type III secreted effector hopPmaA | RecName: Full=Effector protein hopW1-1; AltName: Full=Type III effector hopPmaA; | pPMA4326B | CDS | 13610 | 2325 | - | 0.544516 |
NA | pPMA4326B | misc_feature | 16247 | 203 | + | 0.517241 | |||
NA | pPMA4326B | stem_loop | 39865 | 35 | + | 0.514286 | |||
NA | pPMA4326B | stem_loop | 19084 | 26 | + | 0.5 | |||
NA | PMA4326B07 | IS801 transposase protein | SubName: Full=IS801 transposase protein; | pPMA4326B | CDS | 7062 | 1230 | - | 0.606504 |
NA | MFB10 | pPMA4326B | pseudo | 30585 | 89 | + | 0.573034 | ||
NA | pPMA4326B | promoter | 17091 | 26 | - | 0.576923 | |||
NA | PMA4326B09 | resolvase | SubName: Full=Resolvase; | pPMA4326B | CDS | 10161 | 606 | + | 0.511551 |
NA | PMA4326B19 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 25979 | 141 | + | 0.496454 |
NA | PMA4326B08 | candidate type III effector | RecName: Full=Putative truncated effector protein hopW1-2; | pPMA4326B | CDS | 8608 | 723 | - | 0.543568 |
NA | pPMA4326B | stem_loop | 16653 | 33 | + | 0.333333 | |||
NA | MFB01 | pPMA4326B | pseudo | 3181 | 1561 | + | 0.586803 | ||
NA | MFB08 | pPMA4326B | pseudo | 25401 | 495 | + | 0.567677 | ||
NA | PMA4326B06 | MFS sugar transporter | SubName: Full=MFS sugar transporter; | pPMA4326B | CDS | 5391 | 1419 | + | 0.59408 |
NA | MFB05 | pPMA4326B | pseudo | 17513 | 360 | - | 0.563889 | ||
NA | MFB07 | pPMA4326B | pseudo | 22809 | 890 | - | 0.592135 | ||
NA | pPMA4326B | promoter | 19123 | 26 | + | 0.423077 | |||
NA | MFB09 | pPMA4326B | pseudo | 27442 | 193 | + | 0.611399 | ||
NA | PMA4326B24 | ISPsy1 transposase | SubName: Full=ISPsy1 transposase; | pPMA4326B | CDS | 30768 | 1074 | + | 0.536313 |
NA | PMA4326B03 | stability determinant | SubName: Full=Stability determinant; | pPMA4326B | CDS | 1816 | 201 | + | 0.567164 |
NA | pPMA4326B | stem_loop | 39824 | 34 | + | 0.647059 | |||
NA | PMA4326B17 | stability/partitioning determinant | SubName: Full=Stability/partitioning determinant; | pPMA4326B | CDS | 21261 | 324 | + | 0.487654 |
NA | PMA4326B25 | ISPssy transposase | SubName: Full=ISPssy transposase; | pPMA4326B | CDS | 32371 | 978 | + | 0.548057 |
NA | pPMA4326B | promoter | 16169 | 26 | - | 0.653846 | |||
NA | PMA4326B20 | ISPssy transposase | SubName: Full=ISPssy transposase; | pPMA4326B | CDS | 26316 | 969 | - | 0.545924 |
NA | MFB12 | pPMA4326B | pseudo | 37480 | 138 | + | 0.384058 | ||
NA | pPMA4326B | stem_loop | 28970 | 36 | + | 0.305556 | |||
NA | MFB11 | pPMA4326B | pseudo | 32002 | 279 | + | 0.548387 | ||
NA | MFB06 | pPMA4326B | pseudo | 21711 | 782 | - | 0.588235 | ||
NA | PMA4326B10 | integrase | SubName: Full=Integrase; | pPMA4326B | CDS | 10750 | 1659 | + | 0.584087 |
IS801 | pPMA4326B | repeat_region | 6882 | 1765 | + | 0.582436 | |||
IS801 | pPMA4326B | repeat_region | 3001 | 2096 | + | 0.569656 | |||
ISPssy | pPMA4326B | repeat_region | 26171 | 1184 | + | 0.530405 | |||
ISPssy | pPMA4326B | repeat_region | 32301 | 1193 | + | 0.532272 | |||
ISPsy1 | pPMA4326B | repeat_region | 30689 | 1150 | + | 0.526087 | |||
PMA4326B05 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 2562 | 414 | + | 0.507246 | |
PMA4326B13 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 18293 | 681 | - | 0.521292 | |
PMA4326B14 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 19161 | 273 | - | 0.472527 | |
PMA4326B21 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 27641 | 1125 | - | 0.562667 | |
PMA4326B22 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 29010 | 474 | - | 0.468354 | |
PMA4326B23 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 29708 | 783 | - | 0.605364 | |
PMA4326B27 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 37215 | 201 | + | 0.517413 | |
PMA4326B28 | gntR transcriptional regulator | SubName: Full=GntR transcriptional regulator; SubName: Full=Transcriptional regulator; | pPMA4326B | CDS | 37785 | 429 | + | 0.617716 | |
PMA4326B29 | hypothetical protein | SubName: Full=Uncharacterized protein; | pPMA4326B | CDS | 38549 | 921 | + | 0.57329 | |
exeA | PMA4326B11 | exeA-like protein | SubName: Full=ExeA-like protein; | pPMA4326B | CDS | 12398 | 972 | + | 0.583333 |
mob | PMA4326B26 | mobilization protein | SubName: Full=Mobilization protein; | pPMA4326B | CDS | 33565 | 3474 | + | 0.587507 |
parA | PMA4326B16 | stability/partitioning determinant | SubName: Full=Stability/partitioning determinant; | pPMA4326B | CDS | 20570 | 699 | + | 0.519313 |
parE | PMA4326B04 | stability determinant | SubName: Full=Stability determinant; | pPMA4326B | CDS | 2016 | 294 | + | 0.510204 |
repA | PMA4326B01 | replication protein | SubName: Full=Replication protein; | pPMA4326B | CDS | 1 | 1302 | + | 0.607527 |
ssb | PMA4326B02 | single-stranded binding protein | SubName: Full=Single-stranded binding protein; | pPMA4326B | CDS | 1451 | 294 | + | 0.540816 |
stbA | PMA4326B15 | stability/partitioning determinant | SubName: Full=Stability/partitioning determinant; | pPMA4326B | CDS | 19527 | 636 | - | 0.578616 |