Gene list
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Gene type: CDS
Genomic element: pHCG3
Number of genes found: 125
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Oligotropha carboxidovorans, OM5 = DSM 1227 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | hypothetical conserved protein | pHCG3 | CDS | 85759 | 327 | - | 0.584098 | |
NA | hypothetical protein | pHCG3 | CDS | 88465 | 558 | + | 0.603943 | |
NA | hypothetical protein | pHCG3 | CDS | 94289 | 312 | - | 0.621795 | |
NA | hypothetical protein | pHCG3 | CDS | 87851 | 603 | + | 0.590381 | |
NA | hypothetical protein | pHCG3 | CDS | 87575 | 393 | - | 0.628499 | |
NA | glyceraldehyde-3-phosphate dehydrogenase | pHCG3 | CDS | 45192 | 1008 | + | 0.597222 | |
NA | probable exonuclease | pHCG3 | CDS | 10569 | 312 | + | 0.644231 | |
NA | hypothetical protein | pHCG3 | CDS | 19262 | 420 | + | 0.564286 | |
NA | hypothetical protein | pHCG3 | CDS | 94786 | 351 | - | 0.672365 | |
NA | hypothetical protein | pHCG3 | CDS | 4616 | 477 | + | 0.668763 | |
NA | conserved hypothetical protein | pHCG3 | CDS | 100101 | 372 | + | 0.604839 | |
NA | S-layer RTX protein | pHCG3 | CDS | 16872 | 468 | - | 0.581197 | |
NA | hypothetical protein | pHCG3 | CDS | 99199 | 819 | + | 0.634921 | |
NA | hypothetical protein | pHCG3 | CDS | 12007 | 504 | + | 0.59127 | |
NA | methyl-transferase | pHCG3 | CDS | 9687 | 405 | + | 0.562963 | |
NA | probable adhesin | pHCG3 | CDS | 116252 | 3579 | - | 0.590388 | |
NA | hypothetical protein | pHCG3 | CDS | 96579 | 2010 | + | 0.654229 | |
NA | hypothetical protein | pHCG3 | CDS | 22643 | 762 | + | 0.7021 | |
NA | hypothetical conserved protein | pHCG3 | CDS | 86483 | 1089 | + | 0.655647 | |
NA | transposase ISC1190 | pHCG3 | CDS | 95417 | 903 | - | 0.609081 | |
NA | hypothetical protein | pHCG3 | CDS | 100522 | 657 | + | 0.70624 | |
NA | hypothetical protein | pHCG3 | CDS | 1 | 339 | - | 0.587021 | |
NA | hypothetical protein | pHCG3 | CDS | 12485 | 828 | + | 0.631643 | |
NA | hypothetical conserved protein | pHCG3 | CDS | 6022 | 585 | + | 0.65641 | |
NA | hypothetical protein | pHCG3 | CDS | 105516 | 354 | + | 0.618644 | |
NA | nuclease | pHCG3 | CDS | 106960 | 375 | - | 0.648 | |
NA | hypothetical protein | pHCG3 | CDS | 2199 | 477 | - | 0.633124 | |
NA | hypothetical protein | pHCG3 | CDS | 88949 | 582 | + | 0.642612 | |
NA | ribulose-phosphate-3-epimerase | pHCG3 | CDS | 51463 | 609 | + | 0.605911 | |
NA | terminase-like protein | pHCG3 | CDS | 115916 | 315 | - | 0.584127 | |
NA | hypothetical protein | pHCG3 | CDS | 98669 | 477 | + | 0.641509 | |
NA | hypothetical protein | pHCG3 | CDS | 106380 | 399 | - | 0.586466 | |
NA | hypothetical protein | pHCG3 | CDS | 107344 | 381 | + | 0.608924 | |
NA | sedoheptulose 7-phosphate isomerase | pHCG3 | CDS | 71662 | 693 | + | 0.598846 | |
NA | periplasmic protein | pHCG3 | CDS | 18198 | 978 | - | 0.56544 | |
NA | conserved hypothetical protein | pHCG3 | CDS | 101133 | 732 | + | 0.681694 | |
NA | kinesin like protein | pHCG3 | CDS | 18011 | 504 | + | 0.555556 | |
NA | hydrogenase-3 accessory protein | pHCG3 | CDS | 55021 | 780 | - | 0.598718 | |
NA | transketolase | pHCG3 | CDS | 43442 | 1749 | + | 0.652373 | |
NA | hydrolase of HAD-superfamily | pHCG3 | CDS | 7875 | 711 | - | 0.589311 | |
NA | putative methylase protein | pHCG3 | CDS | 89632 | 4653 | + | 0.627982 | |
NA | transposase B | pHCG3 | CDS | 83785 | 726 | + | 0.599174 | |
NA | hypothetical protein | pHCG3 | CDS | 5160 | 780 | + | 0.701282 | |
NA | hypothetical protein | pHCG3 | CDS | 75594 | 780 | + | 0.64359 | |
NA | putative outer membrane receptor | pHCG3 | CDS | 77653 | 1779 | + | 0.618887 | |
NA | legumin precursor | pHCG3 | CDS | 8635 | 444 | + | 0.587838 | |
NA | hypothetical protein | pHCG3 | CDS | 81955 | 810 | - | 0.641975 | |
NA | hypothetical protein | pHCG3 | CDS | 19588 | 459 | - | 0.592593 | |
NA | hypothetical conserved protein | pHCG3 | CDS | 11332 | 576 | - | 0.631944 | |
NA | levanfructo-transferase precursor | pHCG3 | CDS | 10091 | 312 | + | 0.580128 | |
NA | probable integrase | pHCG3 | CDS | 3804 | 801 | - | 0.721598 | |
NA | hypothetical protein | pHCG3 | CDS | 23367 | 1476 | + | 0.665989 | |
NA | nickel responsive regulator protein | pHCG3 | CDS | 76414 | 456 | - | 0.629386 | |
afgP | anti-freeze glycopeptide AfgP | pHCG3 | CDS | 15413 | 930 | + | 0.544086 | |
ardC | putative ardC protein | pHCG3 | CDS | 103921 | 930 | + | 0.589247 | |
cbbA | fructose-1,6-bisphosphate aldolase | pHCG3 | CDS | 47630 | 873 | + | 0.611684 | |
cbbF | fructose-1,6-bisphosphatase | pHCG3 | CDS | 41202 | 1038 | + | 0.627168 | |
cbbK | phosphoglycerate-kinase | pHCG3 | CDS | 46403 | 1002 | + | 0.616766 | |
cbbL | rubisco large subunit | pHCG3 | CDS | 48561 | 1461 | + | 0.607118 | |
cbbP | phosphoribulokinase | pHCG3 | CDS | 42318 | 813 | + | 0.596556 | |
cbbR | rubisco-operon transcriptional regulator CbbR | pHCG3 | CDS | 40144 | 882 | - | 0.604308 | |
cbbS | rubisco small subunit | pHCG3 | CDS | 50134 | 330 | + | 0.593939 | |
cbbX | probable CbbX rubisco expressions-protein | pHCG3 | CDS | 50868 | 525 | + | 0.552381 | |
cbbY | CbbY-protein | pHCG3 | CDS | 52955 | 519 | + | 0.591522 | |
cbbZ | phosphoglycolate phosphatase | pHCG3 | CDS | 52236 | 555 | + | 0.610811 | |
coxB | CoxB | pHCG3 | CDS | 25470 | 1008 | + | 0.5625 | |
coxC | CoxC | pHCG3 | CDS | 27015 | 1209 | + | 0.55914 | |
coxD | CoxD | pHCG3 | CDS | 32259 | 888 | + | 0.554054 | |
coxE | CoxE | pHCG3 | CDS | 33148 | 1200 | + | 0.595 | |
coxF | CoxF | pHCG3 | CDS | 34351 | 843 | + | 0.570581 | |
coxG | CoxG | pHCG3 | CDS | 35193 | 618 | + | 0.533981 | |
coxH | CoxH | pHCG3 | CDS | 36235 | 1203 | + | 0.544472 | |
coxI | CoxI | pHCG3 | CDS | 37876 | 993 | + | 0.521652 | |
coxK | CoxK | pHCG3 | CDS | 39117 | 891 | - | 0.628507 | |
coxL | CO-dehydrogenase large chain (CoxL) | pHCG3 | CDS | 29775 | 2430 | + | 0.565432 | |
coxM | CO-dehydrogenase medium chain (CoxM) | pHCG3 | CDS | 28393 | 867 | + | 0.594002 | |
coxS | CO-dehydrogenase small chain (CoxS) | pHCG3 | CDS | 29278 | 501 | + | 0.562874 | |
dnaA3 | DNA-polymerase III-alpha chain | pHCG3 | CDS | 24839 | 339 | + | 0.640118 | |
dnaB | replicative DNA helicase (DnaB) | pHCG3 | CDS | 101969 | 1569 | - | 0.602294 | |
fixI | FixP3 cytochrome c-oxidase membrane anchored subunit | pHCG3 | CDS | 82986 | 315 | - | 0.634921 | |
fixI | nitrogen fixing protein FixI | pHCG3 | CDS | 79628 | 2247 | - | 0.662216 | |
hoxA | regulator of NtrC-family | pHCG3 | CDS | 53519 | 1326 | - | 0.598039 | |
hoxB | [NiFe] hydrogenase-like protein small subunit | pHCG3 | CDS | 65665 | 777 | - | 0.644788 | |
hoxC | uptake hydrogenase | pHCG3 | CDS | 56134 | 924 | - | 0.616883 | |
hoxL | HoxL | pHCG3 | CDS | 61086 | 1821 | - | 0.611203 | |
hoxM | hydrogenase expression-formation protein HoxM | pHCG3 | CDS | 59469 | 618 | - | 0.624595 | |
hoxS | hydrogenase small subunit (HoxS) | pHCG3 | CDS | 62921 | 1083 | - | 0.630656 | |
hoxV | HoxV | pHCG3 | CDS | 64214 | 1455 | - | 0.639175 | |
hoxZ | HoxZ | pHCG3 | CDS | 60332 | 744 | - | 0.584677 | |
hupG | hydrogenase-related protein O | pHCG3 | CDS | 58750 | 384 | - | 0.609375 | |
hupH | hydrogenase expression-formation protein HupH | pHCG3 | CDS | 57902 | 834 | - | 0.643885 | |
hupJ | HupJ | pHCG3 | CDS | 57054 | 588 | - | 0.598639 | |
hupT | hydrogen uptake histidine kinase | pHCG3 | CDS | 66672 | 1434 | - | 0.595537 | |
hypB | HypB like protein | pHCG3 | CDS | 74998 | 648 | + | 0.609568 | |
hypD | HypD-like protein | pHCG3 | CDS | 72771 | 714 | + | 0.584034 | |
hypE | HypE protein | pHCG3 | CDS | 73838 | 711 | + | 0.618847 | |
hypF | [NiFe] hydrogenase maturation protein HypF | pHCG3 | CDS | 69005 | 2364 | + | 0.639594 | |
lasI | autoinducer synthetase protein SolI | pHCG3 | CDS | 13794 | 675 | - | 0.56 | |
raiR | transcriptional-activation protein RaiR | pHCG3 | CDS | 13342 | 501 | - | 0.572854 | |
repA | replication protein A | pHCG3 | CDS | 28 | 798 | + | 0.58396 | |
repB | replication protein B | pHCG3 | CDS | 822 | 1056 | + | 0.609848 | |
repC | replication protein C | pHCG3 | CDS | 2541 | 1185 | + | 0.611814 | |
rhiR | regulation protein RhiR | pHCG3 | CDS | 14787 | 459 | - | 0.553377 | |
rspD | rhizobiocin secretional protein RspD | pHCG3 | CDS | 20008 | 1107 | + | 0.578139 | |
rspE | rhizobiocin secretional protein RspE | pHCG3 | CDS | 21078 | 1344 | + | 0.560268 | |
traA | TraA | pHCG3 | CDS | 110206 | 3366 | + | 0.632799 | |
traB | probable TraB | pHCG3 | CDS | 114100 | 1152 | + | 0.654514 | |
traC | conjugal transfer protein TraC | pHCG3 | CDS | 109741 | 342 | - | 0.631579 | |
traD | probable TraD | pHCG3 | CDS | 109521 | 351 | - | 0.649573 | |
traF | probable TraF | pHCG3 | CDS | 113586 | 513 | + | 0.647173 | |
traG | probable TraG | pHCG3 | CDS | 107624 | 1881 | - | 0.624668 | |
traH | TraH | pHCG3 | CDS | 115259 | 603 | + | 0.597015 | |
traI | probable conjugal transfer protein TraI | pHCG3 | CDS | 131637 | 567 | - | 0.643739 | |
traM | probable TraM | pHCG3 | CDS | 120505 | 327 | + | 0.544343 | |
traR | probable TraR | pHCG3 | CDS | 120849 | 720 | - | 0.515278 | |
trbB | VirB11-like protein | pHCG3 | CDS | 130660 | 963 | - | 0.63136 | |
trbC | probable TrbC | pHCG3 | CDS | 130305 | 366 | - | 0.644809 | |
trbD | probable TrbD | pHCG3 | CDS | 130013 | 300 | - | 0.63 | |
trbE | probable TrbE | pHCG3 | CDS | 127566 | 2439 | - | 0.602706 | |
trbF | TrbF | pHCG3 | CDS | 124726 | 588 | - | 0.573129 | |
trbG | probable TrbG | pHCG3 | CDS | 123866 | 837 | - | 0.587814 | |
trbH | probable TrbH | pHCG3 | CDS | 123423 | 441 | - | 0.653061 | |
trbI | probable TrbI | pHCG3 | CDS | 122112 | 1299 | - | 0.594303 | |
trbJ | probable TrbJ | pHCG3 | CDS | 126788 | 852 | - | 0.596244 | |
trbL | probable TrbL | pHCG3 | CDS | 125406 | 1083 | - | 0.621422 |