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2024-06-27 09:28:10

Gene list

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Gene type: CDS
Genomic element: pMT1

Number of genes found: 100

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Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YMT1.42Ac hypothetical protein YPMT1.42AcSubName: Full=Uncharacterized protein; pMT1 CDS44876 147 - 0.455782
YPMT1.01 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS87 1023 + 0.527859
YPMT1.02 putative transposaseSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS1106 783 + 0.50447
YPMT1.03c hypothetical protein YPMT1.03cSubName: Full=Lambda tail fiber assembly protein G; SubName: Full=Phage lambda-related tail assembly protein G; SubName: Full=Uncharacterized protein; pMT1 CDS2022 609 - 0.456486
YPMT1.04c putative phage tail proteinSubName: Full=Putative phage tail protein; pMT1 CDS2932 2889 - 0.499135
YPMT1.05c hypothetical protein YPMT1.05cSubName: Full=Uncharacterized protein; pMT1 CDS5901 618 - 0.496764
YPMT1.06c putative phage tail proteinSubName: Full=Lambda host specificity protein J; SubName: Full=Phage lambda-related host specificity protein J; SubName: Full=Putative phage tail protein; pMT1 CDS6536 4638 - 0.526304
YPMT1.07c putative phage tail proteinSubName: Full=Phage lambda tail assembly protein I; SubName: Full=Putative phage tail protein; SubName: Full=Uncharacterized protein; pMT1 CDS11189 588 - 0.527211
YPMT1.08c putative phage tail proteinSubName: Full=Putative phage tail protein; pMT1 CDS11764 798 - 0.551378
YPMT1.09c putative phage tail proteinSubName: Full=Lambda minor tail fiber protein L; SubName: Full=Putative phage tail protein; pMT1 CDS12554 732 - 0.52459
YPMT1.10c putative phage tail proteinSubName: Full=Lambda minor tail fiber protein M; SubName: Full=Phage lambda-related tail protein M; SubName: Full=Putative phage tail protein; SubName: Full=Uncharacterized protein; pMT1 CDS13342 336 - 0.488095
YPMT1.11c putative membrane proteinSubName: Full=Protein HI1514 homolog; SubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pMT1 CDS13719 4578 - 0.56706
YPMT1.12c hypothetical protein YPMT1.12cSubName: Full=Uncharacterized protein; pMT1 CDS18304 270 - 0.551852
YPMT1.13c hypothetical protein YPMT1.13cSubName: Full=Uncharacterized protein; pMT1 CDS18654 318 - 0.5
YPMT1.14c hypothetical protein YPMT1.14cSubName: Full=Uncharacterized protein; pMT1 CDS19031 747 - 0.535475
YPMT1.15c hypothetical protein YPMT1.15cSubName: Full=Uncharacterized protein; pMT1 CDS19852 384 - 0.466146
YPMT1.16c hypothetical protein YPMT1.16cSubName: Full=Uncharacterized protein; pMT1 CDS20237 474 - 0.544304
YPMT1.17c hypothetical protein YPMT1.17cSubName: Full=Uncharacterized protein; pMT1 CDS20701 459 - 0.535948
YPMT1.18c hypothetical protein YPMT1.18cSubName: Full=Uncharacterized protein; pMT1 CDS21143 834 - 0.544365
YPMT1.19c hypothetical protein YPMT1.19cSubName: Full=Uncharacterized protein; pMT1 CDS21976 435 - 0.51954
YPMT1.20c hypothetical protein YPMT1.20cSubName: Full=Uncharacterized protein; pMT1 CDS22454 663 - 0.526395
YPMT1.21c hypothetical protein YPMT1.21cSubName: Full=Uncharacterized protein; pMT1 CDS23191 876 - 0.539954
YPMT1.22c hypothetical protein YPMT1.22cSubName: Full=Uncharacterized protein; pMT1 CDS24093 834 - 0.556355
YPMT1.23c hypothetical protein YPMT1.23cSubName: Full=Uncharacterized protein; pMT1 CDS24949 1590 - 0.509434
YPMT1.24c hypothetical protein YPMT1.24cSubName: Full=Uncharacterized protein; pMT1 CDS26557 1257 - 0.540971
YPMT1.25Ac hypothetical protein YPMT1.25AcSubName: Full=RGD cell attachment site containing protein; SubName: Full=Uncharacterized protein; pMT1 CDS28653 267 - 0.524345
YPMT1.25c hypothetical protein YPMT1.25cSubName: Full=Uncharacterized protein; pMT1 CDS27816 642 - 0.556075
YPMT1.26Ac hypothetical protein YPMT1.26AcSubName: Full=Uncharacterized protein; pMT1 CDS29825 255 - 0.52549
YPMT1.26c hypothetical protein YPMT1.26cSubName: Full=Uncharacterized protein; pMT1 CDS28929 900 - 0.556667
YPMT1.27c putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter; SubName: Full=Putative ABC transporter ATP-binding protein; pMT1 CDS30072 699 - 0.553648
YPMT1.28c hypothetical protein YPMT1.28cSubName: Full=Uncharacterized protein; pMT1 CDS30707 669 - 0.559043
YPMT1.29c hypothetical protein YPMT1.29cSubName: Full=Uncharacterized protein; pMT1 CDS31375 699 - 0.527897
YPMT1.30 hypothetical protein YPMT1.30SubName: Full=Uncharacterized protein; pMT1 CDS32138 1560 + 0.514103
YPMT1.31 hypothetical protein YPMT1.31SubName: Full=Uncharacterized protein; pMT1 CDS33700 279 + 0.458781
YPMT1.32 putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Uncharacterized protein; pMT1 CDS34038 423 + 0.541371
YPMT1.33 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; SubName: Full=Repressor of phase 1 fagellin homolog; pMT1 CDS34465 528 + 0.517045
YPMT1.34 hypothetical protein YPMT1.34SubName: Full=Uncharacterized protein; pMT1 CDS35314 651 + 0.394777
YPMT1.34A hypothetical protein YPMT1.34ASubName: Full=Uncharacterized protein; pMT1 CDS36049 228 + 0.372807
YPMT1.35c hypothetical protein YPMT1.35cSubName: Full=Uncharacterized protein; pMT1 CDS36915 483 - 0.503106
YPMT1.36c hypothetical protein YPMT1.36cSubName: Full=Uncharacterized protein; pMT1 CDS37603 288 - 0.524306
YPMT1.37c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Transposase for the IS1541 insertion element; pMT1 CDS38084 459 - 0.457516
YPMT1.38c hypothetical protein YPMT1.38cSubName: Full=Uncharacterized protein; pMT1 CDS38751 570 - 0.52807
YPMT1.39c hypothetical protein YPMT1.39cSubName: Full=Uncharacterized protein; pMT1 CDS39333 747 - 0.497992
YPMT1.3Ac hypothetical protein YPMT1.3AcSubName: Full=Uncharacterized protein; pMT1 CDS2723 213 - 0.42723
YPMT1.40Ac hypothetical protein YPMT1.40AcSubName: Full=Uncharacterized protein; pMT1 CDS41994 225 - 0.484444
YPMT1.40c putative exonuclease subunit 2SubName: Full=Putative exonuclease subunit 2; pMT1 CDS40069 1917 - 0.529995
YPMT1.41c putative exonuclease subunit 1SubName: Full=Putative exonuclease subunit 1; SubName: Full=Uncharacterized protein; pMT1 CDS42215 1086 - 0.540516
YPMT1.42 putative periplasmic proteinSubName: Full=Hypothetical lipoprotein; SubName: Full=Putative lipoprotein; SubName: Full=Putative periplasmic protein; pMT1 CDS43716 1023 + 0.449658
YPMT1.43c hypothetical protein YPMT1.43cSubName: Full=Uncharacterized protein; pMT1 CDS45098 645 - 0.528682
YPMT1.44 putative replication protein ASubName: Full=Putative replication protein A; SubName: Full=RepA homolog; SubName: Full=Replication protein A; pMT1 CDS46487 1065 + 0.514554
YPMT1.45c hypothetical protein YPMT1.45cSubName: Full=Hypothetical regulator; SubName: Full=Uncharacterized protein; pMT1 CDS48120 216 - 0.550926
YPMT1.46Ac hypothetical protein YPMT1.46AcSubName: Full=Uncharacterized protein; pMT1 CDS48664 180 - 0.455556
YPMT1.46Bc hypothetical protein YPMT1.46BcSubName: Full=Uncharacterized protein; pMT1 CDS48884 276 - 0.467391
YPMT1.46c hypothetical protein YPMT1.46cSubName: Full=Uncharacterized protein; pMT1 CDS48332 336 - 0.505952
YPMT1.47c hypothetical protein YPMT1.47cSubName: Full=Uncharacterized protein; pMT1 CDS49227 411 - 0.559611
YPMT1.48c hypothetical protein YPMT1.48cSubName: Full=Uncharacterized protein; pMT1 CDS49621 372 - 0.497312
YPMT1.49Ac hypothetical protein YPMT1.49AcSubName: Full=Uncharacterized protein; pMT1 CDS50980 201 - 0.447761
YPMT1.49c putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Putative serine protease; SubName: Full=Putative serine proteinase; pMT1 CDS50146 831 - 0.515042
YPMT1.50Ac hypothetical protein YPMT1.50AcSubName: Full=Uncharacterized protein; pMT1 CDS52350 267 - 0.546816
YPMT1.50c putative recombinaseSubName: Full=Putative recombinase; pMT1 CDS51271 1077 - 0.545961
YPMT1.51c putative exonucleaseSubName: Full=Putative exonuclease; SubName: Full=Uncharacterized protein; pMT1 CDS52616 945 - 0.526984
YPMT1.52c hypothetical protein YPMT1.52cSubName: Full=P2 protein homolog; SubName: Full=Uncharacterized protein; pMT1 CDS53621 1029 - 0.519922
YPMT1.53c hypothetical protein YPMT1.53cSubName: Full=Uncharacterized protein; pMT1 CDS54769 474 - 0.5
YPMT1.54 hypothetical protein YPMT1.54SubName: Full=Uncharacterized protein; pMT1 CDS55745 564 + 0.512411
YPMT1.55c hypothetical protein YPMT1.55cSubName: Full=Uncharacterized protein; pMT1 CDS56338 444 - 0.518018
YPMT1.57c putative IS100 transposaseSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS57333 783 - 0.50447
YPMT1.58c putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS58112 1023 - 0.527859
YPMT1.59c putative DNA-binding proteinSubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; pMT1 CDS59258 2010 - 0.61393
YPMT1.60c hypothetical protein YPMT1.60cRecName: Full=UPF0401 protein YubL; pMT1 CDS61340 231 - 0.593074
YPMT1.61c putative antirestriction proteinSubName: Full=Antirestriction protein; SubName: Full=Antirestriction protein ArdA; SubName: Full=Antirestriction protein homolog; SubName: Full=Putative antirestriction protein; pMT1 CDS62283 507 - 0.538462
YPMT1.62c hypothetical protein YPMT1.62cSubName: Full=Uncharacterized protein; pMT1 CDS63188 780 - 0.552564
YPMT1.63Ac hypothetical protein YPMT1.63AcSubName: Full=Putative cytoplasmic protein; SubName: Full=Uncharacterized protein; pMT1 CDS64451 222 - 0.536036
YPMT1.63c hypothetical protein YPMT1.63cSubName: Full=Uncharacterized protein; pMT1 CDS64021 492 - 0.558943
YPMT1.64c putative DNA methylaseSubName: Full=Adenine-specific methyltransferase; SubName: Full=Putative DNA methylase; SubName: Full=Putative hemagglutinin-associated protein; SubName: Full=Uncharacterized protein; pMT1 CDS64672 678 - 0.581121
YPMT1.65 hypothetical protein YPMT1.65SubName: Full=Uncharacterized protein; pMT1 CDS65742 309 + 0.504854
YPMT1.66c putative DNA-binding proteinSubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; pMT1 CDS66212 1398 - 0.483548
YPMT1.67c putative partitioning protein BSubName: Full=Chromosome partitioning protein ParB; SubName: Full=ParB homolog; SubName: Full=Partitioning protein; SubName: Full=Putative partitioning protein B; pMT1 CDS67988 972 - 0.447531
YPMT1.68A hypothetical protein YPMT1.68ASubName: Full=Prevent-host-death family protein; SubName: Full=Uncharacterized protein; pMT1 CDS70463 228 + 0.434211
YPMT1.68c putative partitioning protein ASubName: Full=ParA homolog; SubName: Full=Putative partitioning protein A; pMT1 CDS68956 1206 - 0.451907
YPMT1.69 hypothetical protein YPMT1.69SubName: Full=Inner membrane protein; SubName: Full=Uncharacterized protein; pMT1 CDS70690 327 + 0.434251
YPMT1.70 putative resolvaseSubName: Full=Putative resolvase; SubName: Full=Putative site-specific recombinase; pMT1 CDS71216 621 + 0.495974
YPMT1.71 hypothetical protein YPMT1.71SubName: Full=Putative transposase; SubName: Full=Uncharacterized protein; pMT1 CDS71857 987 + 0.507599
YPMT1.72c hypothetical protein YPMT1.72cSubName: Full=Uncharacterized protein; pMT1 CDS72866 276 - 0.518116
YPMT1.73 hypothetical protein YPMT1.73SubName: Full=Putative endonuclease; SubName: Full=Uncharacterized protein; pMT1 CDS73881 489 + 0.435583
YPMT1.74 murine toxinSubName: Full=Toxin; pMT1 CDS74612 1599 + 0.380238
YPMT1.75c hypothetical protein YPMT1.75cSubName: Full=Uncharacterized protein; pMT1 CDS76455 471 - 0.558386
YPMT1.76 hypothetical protein YPMT1.76SubName: Full=Uncharacterized protein; pMT1 CDS76996 309 + 0.566343
YPMT1.76A hypothetical protein YPMT1.76ASubName: Full=Uncharacterized protein; pMT1 CDS77219 372 + 0.526882
YPMT1.77c SubName: Full=YPMT1.77c protein; Flags: Fragment; pMT1 CDS77583 84 - 0.416667
YPMT1.79c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pMT1 CDS78286 1023 - 0.519062
YPMT1.80c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Transposase for the IS285 insertion element; pMT1 CDS79777 1209 - 0.496278
YPMT1.81c putative F1 operon positive regulatory proteinRecName: Full=F1 operon positive regulatory protein; pMT1 CDS81334 924 - 0.333333
YPMT1.82 putative F1 chaperone proteinRecName: Full=Chaperone protein caf1M; AltName: Full=Capsule protein fraction 1; Flags: Precursor; pMT1 CDS82567 777 + 0.405405
YPMT1.83 putative F1 capsule anchoring proteinRecName: Full=F1 capsule-anchoring protein; Flags: Precursor; pMT1 CDS83368 2502 + 0.396083
YPMT1.84 putative F1 capsule antigenRecName: Full=F1 capsule antigen; Flags: Precursor; pMT1 CDS85950 513 + 0.42885
YPMT1.85 putative integraseSubName: Full=Putative integrase; SubName: Full=Uncharacterized protein; pMT1 CDS87147 1179 + 0.478372
YPMT1.86A hypothetical protein YPMT1.86ASubName: Full=Uncharacterized protein; pMT1 CDS88969 213 + 0.43662
YPMT1.86c hypothetical protein YPMT1.86cSubName: Full=Uncharacterized protein; pMT1 CDS88320 387 - 0.496124
YPMT1.87 putative porphyrin biosynthetic proteinSubName: Full=Putative porphyrin biosynthetic enzyme; SubName: Full=Putative porphyrin biosynthetic protein; pMT1 CDS89291 2367 + 0.52049
YPMT1.88 putative porphyrin biosynthetic proteinSubName: Full=CobS homolog; SubName: Full=Putative porphyrin biosynthetic enzyme; SubName: Full=Putative porphyrin biosynthetic protein; pMT1 CDS91754 1236 + 0.526699