Gene list
Applied filters:
Gene type: CDS
Gene type: CDS
Genomic element: pTi-SAKURA
Number of genes found: 195
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Agrobacterium tumefaciens, MAFF301001 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
tiorf1 | pTi-SAKURA | CDS | 1559 | 921 | - | 0.570033 | ||
tiorf10 | pTi-SAKURA | CDS | 9985 | 663 | - | 0.61991 | ||
tiorf100 | pTi-SAKURA | CDS | 93812 | 639 | + | 0.528951 | ||
tiorf101 | pTi-SAKURA | CDS | 94584 | 615 | - | 0.619512 | ||
tiorf102 | pTi-SAKURA | CDS | 95500 | 279 | - | 0.598566 | ||
tiorf103 | pTi-SAKURA | CDS | 95918 | 258 | - | 0.604651 | ||
tiorf104 | pTi-SAKURA | CDS | 96606 | 327 | + | 0.568807 | ||
tiorf105 | pTi-SAKURA | CDS | 97310 | 402 | - | 0.59204 | ||
tiorf106 | pTi-SAKURA | CDS | 97732 | 1950 | - | 0.651795 | ||
tiorf107 | pTi-SAKURA | CDS | 99668 | 216 | - | 0.643519 | ||
tiorf108 | pTi-SAKURA | CDS | 99888 | 297 | - | 0.6633 | ||
tiorf109 | pTi-SAKURA | CDS | 100441 | 3585 | + | 0.638494 | ||
tiorf11 | pTi-SAKURA | CDS | 10662 | 1164 | - | 0.645189 | ||
tiorf110 | pTi-SAKURA | CDS | 104022 | 531 | + | 0.649718 | ||
tiorf111 | pTi-SAKURA | CDS | 104476 | 1248 | + | 0.655449 | ||
tiorf112 | pTi-SAKURA | CDS | 105737 | 627 | + | 0.61563 | ||
tiorf113 | pTi-SAKURA | CDS | 106888 | 309 | + | 0.546926 | ||
tiorf114 | pTi-SAKURA | CDS | 107355 | 1725 | - | 0.59942 | ||
tiorf115 | pTi-SAKURA | CDS | 109182 | 330 | - | 0.521212 | ||
tiorf116 | pTi-SAKURA | CDS | 109541 | 705 | - | 0.587234 | ||
tiorf117 | pTi-SAKURA | CDS | 110463 | 1509 | - | 0.552021 | ||
tiorf118 | pTi-SAKURA | CDS | 111972 | 1584 | - | 0.589015 | ||
tiorf119 | pTi-SAKURA | CDS | 114166 | 777 | + | 0.570142 | ||
tiorf12 | pTi-SAKURA | CDS | 11852 | 219 | - | 0.694064 | ||
tiorf120 | pTi-SAKURA | CDS | 115000 | 1566 | + | 0.547893 | ||
tiorf121 | pTi-SAKURA | CDS | 116599 | 966 | + | 0.584886 | ||
tiorf122 | pTi-SAKURA | CDS | 117561 | 1020 | + | 0.580392 | ||
tiorf123 | pTi-SAKURA | CDS | 118577 | 927 | + | 0.568501 | ||
tiorf124 | pTi-SAKURA | CDS | 119496 | 861 | + | 0.569106 | ||
tiorf125 | pTi-SAKURA | CDS | 120372 | 801 | + | 0.570537 | ||
tiorf126 | pTi-SAKURA | CDS | 121216 | 768 | + | 0.557292 | ||
tiorf127 | pTi-SAKURA | CDS | 122359 | 1086 | + | 0.538674 | ||
tiorf128 | pTi-SAKURA | CDS | 123199 | 909 | - | 0.577558 | ||
tiorf129 | pTi-SAKURA | CDS | 124584 | 1176 | + | 0.534864 | ||
tiorf13 | pTi-SAKURA | CDS | 12067 | 804 | - | 0.60199 | ||
tiorf130 | pTi-SAKURA | CDS | 125919 | 1176 | + | 0.580782 | ||
tiorf131 | pTi-SAKURA | CDS | 127370 | 924 | + | 0.544372 | ||
tiorf132 | pTi-SAKURA | CDS | 128377 | 270 | - | 0.540741 | ||
tiorf133 | pTi-SAKURA | CDS | 129189 | 939 | + | 0.510117 | ||
tiorf134 | pTi-SAKURA | CDS | 130578 | 429 | + | 0.552448 | ||
tiorf135 | pTi-SAKURA | CDS | 131028 | 435 | + | 0.510345 | ||
tiorf136 | pTi-SAKURA | CDS | 131462 | 360 | + | 0.580556 | ||
tiorf137 | pTi-SAKURA | CDS | 131906 | 276 | - | 0.652174 | ||
tiorf138 | pTi-SAKURA | CDS | 134107 | 711 | - | 0.563994 | ||
tiorf139 | pTi-SAKURA | CDS | 135962 | 732 | - | 0.539617 | ||
tiorf14 | pTi-SAKURA | CDS | 12842 | 2469 | - | 0.628595 | ||
tiorf140 | pTi-SAKURA | CDS | 137530 | 2502 | + | 0.523181 | ||
tiorf141 | pTi-SAKURA | CDS | 140576 | 738 | + | 0.563686 | ||
tiorf142 | pTi-SAKURA | CDS | 141313 | 366 | + | 0.579235 | ||
tiorf143 | pTi-SAKURA | CDS | 141678 | 327 | + | 0.568807 | ||
tiorf144 | pTi-SAKURA | CDS | 142004 | 2370 | + | 0.553165 | ||
tiorf145 | pTi-SAKURA | CDS | 144390 | 663 | + | 0.567119 | ||
tiorf146 | pTi-SAKURA | CDS | 145153 | 888 | + | 0.541667 | ||
tiorf147 | pTi-SAKURA | CDS | 146076 | 168 | + | 0.553571 | ||
tiorf148 | pTi-SAKURA | CDS | 146230 | 714 | + | 0.55042 | ||
tiorf149 | pTi-SAKURA | CDS | 146940 | 882 | + | 0.540816 | ||
tiorf15 | pTi-SAKURA | CDS | 15321 | 300 | - | 0.65 | ||
tiorf150 | pTi-SAKURA | CDS | 147818 | 1134 | + | 0.578483 | ||
tiorf151 | pTi-SAKURA | CDS | 148992 | 1035 | + | 0.553623 | ||
tiorf152 | pTi-SAKURA | CDS | 150245 | 762 | + | 0.538058 | ||
tiorf153 | pTi-SAKURA | CDS | 151148 | 609 | - | 0.558292 | ||
tiorf154 | pTi-SAKURA | CDS | 151759 | 696 | - | 0.54023 | ||
tiorf155 | pTi-SAKURA | CDS | 152725 | 444 | + | 0.540541 | ||
tiorf156 | pTi-SAKURA | CDS | 153202 | 1344 | + | 0.582589 | ||
tiorf157 | pTi-SAKURA | CDS | 154560 | 2022 | + | 0.558358 | ||
tiorf158 | pTi-SAKURA | CDS | 156655 | 2007 | + | 0.531141 | ||
tiorf159 | pTi-SAKURA | CDS | 158773 | 2526 | + | 0.552257 | ||
tiorf16 | pTi-SAKURA | CDS | 15613 | 402 | - | 0.629353 | ||
tiorf160 | pTi-SAKURA | CDS | 161675 | 327 | - | 0.547401 | ||
tiorf161 | pTi-SAKURA | CDS | 162387 | 252 | + | 0.559524 | ||
tiorf162 | pTi-SAKURA | CDS | 162754 | 192 | + | 0.458333 | ||
tiorf163 | pTi-SAKURA | CDS | 162959 | 1671 | + | 0.503291 | ||
tiorf164 | pTi-SAKURA | CDS | 164744 | 2007 | + | 0.519183 | ||
tiorf165 | pTi-SAKURA | CDS | 167260 | 630 | - | 0.588889 | ||
tiorf166 | pTi-SAKURA | CDS | 167918 | 732 | - | 0.599727 | ||
tiorf167 | pTi-SAKURA | CDS | 168646 | 555 | - | 0.587387 | ||
tiorf168 | pTi-SAKURA | CDS | 169190 | 174 | - | 0.597701 | ||
tiorf169 | pTi-SAKURA | CDS | 169404 | 777 | - | 0.586873 | ||
tiorf17 | pTi-SAKURA | CDS | 16004 | 972 | - | 0.633745 | ||
tiorf170 | pTi-SAKURA | CDS | 170173 | 369 | - | 0.574526 | ||
tiorf171 | pTi-SAKURA | CDS | 170755 | 234 | - | 0.534188 | ||
tiorf172 | pTi-SAKURA | CDS | 171321 | 1116 | - | 0.49552 | ||
tiorf173 | pTi-SAKURA | CDS | 173340 | 684 | + | 0.480994 | ||
tiorf174 | pTi-SAKURA | CDS | 174479 | 1185 | - | 0.498734 | ||
tiorf175 | pTi-SAKURA | CDS | 176176 | 1050 | - | 0.630476 | ||
tiorf176 | pTi-SAKURA | CDS | 178097 | 444 | - | 0.626126 | ||
tiorf177 | pTi-SAKURA | CDS | 179821 | 699 | + | 0.500715 | ||
tiorf178 | pTi-SAKURA | CDS | 181225 | 693 | + | 0.507937 | ||
tiorf179 | pTi-SAKURA | CDS | 182396 | 945 | + | 0.50582 | ||
tiorf18 | pTi-SAKURA | CDS | 16972 | 636 | - | 0.595912 | ||
tiorf180 | pTi-SAKURA | CDS | 183802 | 1107 | - | 0.459801 | ||
tiorf181 | pTi-SAKURA | CDS | 185672 | 666 | + | 0.45045 | ||
tiorf182 | pTi-SAKURA | CDS | 186844 | 1404 | - | 0.512108 | ||
tiorf183 | pTi-SAKURA | CDS | 188587 | 2268 | + | 0.499559 | ||
tiorf184 | pTi-SAKURA | CDS | 191551 | 723 | + | 0.503458 | ||
tiorf185 | pTi-SAKURA | CDS | 192789 | 561 | + | 0.488414 | ||
tiorf186 | pTi-SAKURA | CDS | 193832 | 624 | - | 0.487179 | ||
tiorf187 | pTi-SAKURA | CDS | 195445 | 1242 | - | 0.485507 | ||
tiorf188 | pTi-SAKURA | CDS | 197194 | 1065 | - | 0.586854 | ||
tiorf189 | pTi-SAKURA | CDS | 198306 | 1083 | - | 0.596491 | ||
tiorf19 | pTi-SAKURA | CDS | 17971 | 1218 | + | 0.538588 | ||
tiorf190 | pTi-SAKURA | CDS | 199465 | 975 | - | 0.607179 | ||
tiorf191 | pTi-SAKURA | CDS | 200487 | 1419 | - | 0.63284 | ||
tiorf192 | pTi-SAKURA | CDS | 201902 | 294 | - | 0.595238 | ||
tiorf193 | pTi-SAKURA | CDS | 202192 | 1119 | - | 0.609473 | ||
tiorf194 | pTi-SAKURA | CDS | 203919 | 2037 | + | 0.613648 | ||
tiorf195 | pTi-SAKURA | CDS | 205959 | 1956 | + | 0.602761 | ||
tiorf2 | pTi-SAKURA | CDS | 2594 | 726 | - | 0.575758 | ||
tiorf20 | pTi-SAKURA | CDS | 19418 | 1011 | + | 0.569733 | ||
tiorf21 | pTi-SAKURA | CDS | 20643 | 1320 | + | 0.585606 | ||
tiorf22 | pTi-SAKURA | CDS | 21971 | 942 | - | 0.618896 | ||
tiorf23 | pTi-SAKURA | CDS | 23194 | 1113 | + | 0.614555 | ||
tiorf24 | pTi-SAKURA | CDS | 24431 | 555 | + | 0.603604 | ||
tiorf25 | pTi-SAKURA | CDS | 25099 | 336 | + | 0.568452 | ||
tiorf26 | pTi-SAKURA | CDS | 26031 | 570 | + | 0.596491 | ||
tiorf27 | pTi-SAKURA | CDS | 26682 | 1218 | + | 0.593596 | ||
tiorf28 | pTi-SAKURA | CDS | 28007 | 717 | + | 0.598326 | ||
tiorf29 | pTi-SAKURA | CDS | 28732 | 585 | + | 0.593162 | ||
tiorf3 | pTi-SAKURA | CDS | 3321 | 711 | - | 0.566807 | ||
tiorf30 | pTi-SAKURA | CDS | 29484 | 828 | + | 0.601449 | ||
tiorf31 | pTi-SAKURA | CDS | 30571 | 243 | + | 0.510288 | ||
tiorf32 | pTi-SAKURA | CDS | 30842 | 393 | - | 0.580153 | ||
tiorf33 | pTi-SAKURA | CDS | 31238 | 1164 | - | 0.561856 | ||
tiorf34 | pTi-SAKURA | CDS | 32468 | 1143 | - | 0.580052 | ||
tiorf35 | pTi-SAKURA | CDS | 33767 | 567 | - | 0.599647 | ||
tiorf36 | pTi-SAKURA | CDS | 35189 | 996 | + | 0.570281 | ||
tiorf37 | pTi-SAKURA | CDS | 36292 | 627 | - | 0.542265 | ||
tiorf38 | pTi-SAKURA | CDS | 37732 | 768 | + | 0.513021 | ||
tiorf39 | pTi-SAKURA | CDS | 38715 | 414 | - | 0.603865 | ||
tiorf4 | pTi-SAKURA | CDS | 4106 | 852 | - | 0.556338 | ||
tiorf40 | pTi-SAKURA | CDS | 39347 | 924 | + | 0.646104 | ||
tiorf41 | pTi-SAKURA | CDS | 40231 | 597 | - | 0.628141 | ||
tiorf42 | pTi-SAKURA | CDS | 40267 | 606 | + | 0.625413 | ||
tiorf43 | pTi-SAKURA | CDS | 40824 | 462 | - | 0.634199 | ||
tiorf44 | pTi-SAKURA | CDS | 41508 | 1188 | - | 0.624579 | ||
tiorf45 | pTi-SAKURA | CDS | 41658 | 603 | + | 0.626866 | ||
tiorf46 | pTi-SAKURA | CDS | 42273 | 402 | + | 0.599503 | ||
tiorf47 | pTi-SAKURA | CDS | 42804 | 5082 | + | 0.636954 | ||
tiorf48 | pTi-SAKURA | CDS | 45048 | 672 | - | 0.61756 | ||
tiorf49 | pTi-SAKURA | CDS | 48070 | 1914 | + | 0.631139 | ||
tiorf5 | pTi-SAKURA | CDS | 5022 | 774 | - | 0.577519 | ||
tiorf50 | pTi-SAKURA | CDS | 48331 | 933 | - | 0.620579 | ||
tiorf51 | pTi-SAKURA | CDS | 50008 | 459 | + | 0.642702 | ||
tiorf52 | pTi-SAKURA | CDS | 50506 | 1017 | + | 0.544739 | ||
tiorf53 | pTi-SAKURA | CDS | 51660 | 636 | - | 0.504717 | ||
tiorf54 | pTi-SAKURA | CDS | 52341 | 981 | - | 0.491335 | ||
tiorf55 | pTi-SAKURA | CDS | 53359 | 1173 | - | 0.494459 | ||
tiorf56 | pTi-SAKURA | CDS | 54524 | 1035 | - | 0.518841 | ||
tiorf57 | pTi-SAKURA | CDS | 55605 | 612 | - | 0.511438 | ||
tiorf58 | pTi-SAKURA | CDS | 56213 | 573 | - | 0.481675 | ||
tiorf59 | pTi-SAKURA | CDS | 56803 | 846 | - | 0.526005 | ||
tiorf6 | pTi-SAKURA | CDS | 6016 | 936 | + | 0.547009 | ||
tiorf60 | pTi-SAKURA | CDS | 58543 | 600 | + | 0.661667 | ||
tiorf61 | pTi-SAKURA | CDS | 58907 | 1008 | + | 0.633929 | ||
tiorf62 | pTi-SAKURA | CDS | 59445 | 927 | + | 0.612729 | ||
tiorf63 | pTi-SAKURA | CDS | 60371 | 939 | + | 0.610224 | ||
tiorf64 | pTi-SAKURA | CDS | 61675 | 690 | - | 0.637681 | ||
tiorf65 | pTi-SAKURA | CDS | 62395 | 741 | - | 0.592443 | ||
tiorf66 | pTi-SAKURA | CDS | 63234 | 465 | - | 0.537634 | ||
tiorf67 | pTi-SAKURA | CDS | 63810 | 279 | - | 0.46595 | ||
tiorf68 | pTi-SAKURA | CDS | 64106 | 495 | - | 0.565657 | ||
tiorf69 | pTi-SAKURA | CDS | 64597 | 468 | - | 0.532051 | ||
tiorf7 | pTi-SAKURA | CDS | 7308 | 1317 | - | 0.603645 | ||
tiorf70 | pTi-SAKURA | CDS | 65273 | 1461 | - | 0.581793 | ||
tiorf71 | pTi-SAKURA | CDS | 66781 | 378 | + | 0.550265 | ||
tiorf72 | pTi-SAKURA | CDS | 67926 | 282 | + | 0.507092 | ||
tiorf73 | pTi-SAKURA | CDS | 68280 | 915 | - | 0.575956 | ||
tiorf74 | pTi-SAKURA | CDS | 69410 | 477 | - | 0.545073 | ||
tiorf75 | pTi-SAKURA | CDS | 69947 | 597 | - | 0.629816 | ||
tiorf76 | pTi-SAKURA | CDS | 71469 | 318 | + | 0.638365 | ||
tiorf77 | pTi-SAKURA | CDS | 71755 | 447 | - | 0.61745 | ||
tiorf78 | pTi-SAKURA | CDS | 72341 | 345 | + | 0.571014 | ||
tiorf79 | pTi-SAKURA | CDS | 72706 | 1044 | + | 0.583333 | ||
tiorf8 | pTi-SAKURA | CDS | 8637 | 477 | - | 0.656184 | ||
tiorf80 | pTi-SAKURA | CDS | 72883 | 600 | - | 0.588333 | ||
tiorf81 | pTi-SAKURA | CDS | 74172 | 306 | - | 0.562092 | ||
tiorf82 | pTi-SAKURA | CDS | 74973 | 576 | + | 0.597222 | ||
tiorf83 | pTi-SAKURA | CDS | 75545 | 2151 | + | 0.596002 | ||
tiorf84 | pTi-SAKURA | CDS | 78527 | 732 | + | 0.568306 | ||
tiorf85 | pTi-SAKURA | CDS | 79251 | 669 | + | 0.544096 | ||
tiorf86 | pTi-SAKURA | CDS | 79979 | 465 | + | 0.578495 | ||
tiorf87 | pTi-SAKURA | CDS | 80695 | 1077 | + | 0.545033 | ||
tiorf88 | pTi-SAKURA | CDS | 81873 | 492 | - | 0.563008 | ||
tiorf89 | pTi-SAKURA | CDS | 82606 | 921 | + | 0.57329 | ||
tiorf9 | pTi-SAKURA | CDS | 9113 | 855 | - | 0.625731 | ||
tiorf90 | pTi-SAKURA | CDS | 83632 | 507 | + | 0.564103 | ||
tiorf91 | pTi-SAKURA | CDS | 84250 | 849 | - | 0.60424 | ||
tiorf92 | pTi-SAKURA | CDS | 85188 | 969 | + | 0.589267 | ||
tiorf93 | pTi-SAKURA | CDS | 86249 | 885 | + | 0.581921 | ||
tiorf94 | pTi-SAKURA | CDS | 87413 | 756 | + | 0.60582 | ||
tiorf95 | pTi-SAKURA | CDS | 88242 | 1011 | - | 0.513353 | ||
tiorf96 | pTi-SAKURA | CDS | 89356 | 1014 | + | 0.547337 | ||
tiorf97 | pTi-SAKURA | CDS | 90475 | 1083 | + | 0.542936 | ||
tiorf98 | pTi-SAKURA | CDS | 91554 | 786 | + | 0.577608 | ||
tiorf99 | pTi-SAKURA | CDS | 92456 | 1329 | + | 0.541761 |