Gene list
Applied filters:
Gene type: CDS
Gene type: CDS
Genomic element: pYVa127/90
Number of genes found: 75
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia enterocolitica, A127/90 | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 7555 | 234 | + | 0.431624 | |
lcrD | LcrD | RecName: Full=Low calcium response locus protein D; | pYVa127/90 | CDS | 16073 | 2115 | - | 0.461939 | |
lcrG | LcrG | SubName: Full=LcrG; | pYVa127/90 | CDS | 15307 | 288 | - | 0.461806 | |
lcrR | LcrR | RecName: Full=Low calcium response locus protein R; | pYVa127/90 | CDS | 15636 | 441 | - | 0.492063 | |
lcrV | LcrV | SubName: Full=LcrV; | pYVa127/90 | CDS | 14304 | 1002 | - | 0.38024 | |
orf134 | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 41777 | 405 | - | 0.498765 | |
orf155 | Orf155 | SubName: Full=Orf155; | pYVa127/90 | CDS | 57328 | 432 | + | 0.44213 | |
orf155b | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 62299 | 468 | - | 0.50641 | |
orf186 | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 42307 | 561 | - | 0.508021 | |
orf73 | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 47395 | 216 | - | 0.537037 | |
orf75 | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 43199 | 303 | - | 0.386139 | |
orf76 | Orf76 | SubName: Full=Orf76; SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 43064 | 297 | + | 0.390572 | |
orf78 | Orf78 | SubName: Full=Orf78; SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 52969 | 309 | - | 0.443366 | |
orf79 | Orf79 | SubName: Full=Orf79; SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 53277 | 630 | - | 0.463492 | |
orf80 | unknown | RecName: Full=Antitoxin ParD; | pYVa127/90 | CDS | 43494 | 243 | - | 0.44856 | |
orf81 | Orf81 | SubName: Full=Orf81; SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 54081 | 735 | - | 0.55102 | |
orf88 | Orf85 | SubName: Full=Orf85; SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 56900 | 267 | - | 0.486891 | |
orf91b | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 10975 | 231 | + | 0.406926 | |
orf92 | unknown | SubName: Full=Uncharacterized protein; | pYVa127/90 | CDS | 42735 | 276 | - | 0.503623 | |
repA | putative replication initiator protein RepA | SubName: Full=Putative replication initiator protein RepA; SubName: Full=RepA; | pYVa127/90 | CDS | 66295 | 1023 | + | 0.44086 | |
repB | putative leader peptide RepB | SubName: Full=Putative leader peptide RepB; | pYVa127/90 | CDS | 66246 | 57 | + | 0.508772 | |
repC | RepC | SubName: Full=Putative replication protein RepC; SubName: Full=RepC; | pYVa127/90 | CDS | 65739 | 246 | + | 0.418699 | |
spyA | SpyA | SubName: Full=SpyA; | pYVa127/90 | CDS | 45915 | 1167 | - | 0.44473 | |
spyB | SpyA | SubName: Full=SpyA; | pYVa127/90 | CDS | 45915 | 1209 | - | 0.437552 | |
spyB | SpyB | SubName: Full=SpyB; | pYVa127/90 | CDS | 44953 | 963 | - | 0.417445 | |
sycD | SycD | SubName: Full=SycD; | pYVa127/90 | CDS | 13795 | 507 | - | 0.443787 | |
sycE | SycE | SubName: Full=SycE; SubName: Full=YopE chaperone SycE; | pYVa127/90 | CDS | 40492 | 393 | - | 0.409669 | |
sycH | SycH | SubName: Full=SycH; | pYVa127/90 | CDS | 39713 | 426 | - | 0.413146 | |
sycN | SycN | RecName: Full=Chaperone protein SycN; | pYVa127/90 | CDS | 18880 | 372 | - | 0.518817 | |
sycT | YopT chaperone SycT | RecName: Full=Chaperone protein SycT; | pYVa127/90 | CDS | 5855 | 393 | + | 0.414758 | |
tnp | transposase Tnp | SubName: Full=Transposase Tnp; | pYVa127/90 | CDS | 63026 | 576 | - | 0.473958 | |
tnp | transposase | SubName: Full=Transposase; | pYVa127/90 | CDS | 51637 | 1203 | + | 0.482128 | |
tnp | transposase Tnp1 | SubName: Full=Transposase; SubName: Full=Transposase Tnp1; | pYVa127/90 | CDS | 65079 | 459 | + | 0.461874 | |
tyeA | TyeA | SubName: Full=TyeA; | pYVa127/90 | CDS | 19238 | 279 | - | 0.437276 | |
tyeA | TyeA | SubName: Full=TyeA; | pYVa127/90 | CDS | 19238 | 327 | - | 0.425076 | |
virF | VirF | RecName: Full=Virulence regulon transcriptional activator VirF; | pYVa127/90 | CDS | 28496 | 816 | + | 0.411765 | |
virG | VirG | SubName: Full=Lipoprotein VirG (YscW); SubName: Full=VirG; | pYVa127/90 | CDS | 27977 | 396 | + | 0.444444 | |
yadA | adhesin YadA | RecName: Full=Adhesin YadA; Flags: Precursor; | pYVa127/90 | CDS | 49076 | 1269 | - | 0.42238 | |
ylpA | YlpA | SubName: Full=YlpA; | pYVa127/90 | CDS | 2607 | 750 | - | 0.478667 | |
yomA | YomA | SubName: Full=YomA; | pYVa127/90 | CDS | 48131 | 876 | - | 0.339041 | |
yopB | Yop effector YopB | SubName: Full=Yop effector YopB; | pYVa127/90 | CDS | 12612 | 1206 | - | 0.461857 | |
yopD | Yop effector YopD | SubName: Full=Yop effector YopD; | pYVa127/90 | CDS | 11673 | 921 | - | 0.432139 | |
yopE | YopE | SubName: Full=YopE; | pYVa127/90 | CDS | 41077 | 660 | + | 0.510606 | |
yopH | YopH | SubName: Full=YopH; | pYVa127/90 | CDS | 38085 | 1407 | + | 0.469083 | |
yopM | Yop effector YopM | SubName: Full=Yop effector YopM; | pYVa127/90 | CDS | 9260 | 1581 | - | 0.401645 | |
yopN | YopN | SubName: Full=YopN; | pYVa127/90 | CDS | 19497 | 882 | - | 0.461451 | |
yopO | YopO | SubName: Full=Protein kinase YopO; SubName: Full=YopO; | pYVa127/90 | CDS | 57777 | 2190 | + | 0.483562 | |
yopP | YopP | SubName: Full=YopP; | pYVa127/90 | CDS | 60333 | 867 | + | 0.350634 | |
yopQ | YopQ | SubName: Full=YopQ; | pYVa127/90 | CDS | 3826 | 549 | - | 0.331512 | |
yopT | Yop effector YopT | RecName: Full=Cysteine protease yopT1; EC=3.4.22.-; | pYVa127/90 | CDS | 4887 | 969 | + | 0.430341 | |
yscA | YscA | RecName: Full=Yop proteins translocation protein A; | pYVa127/90 | CDS | 29390 | 99 | + | 0.323232 | |
yscB | YscB | RecName: Full=Chaperone protein YscB; AltName: Full=Yop proteins translocation protein B; | pYVa127/90 | CDS | 29713 | 414 | + | 0.42029 | |
yscC | YscC | SubName: Full=YscC; | pYVa127/90 | CDS | 30132 | 1824 | + | 0.45614 | |
yscD | YscD | SubName: Full=YscD; | pYVa127/90 | CDS | 32099 | 1110 | + | 0.466667 | |
yscD | YscD | SubName: Full=YscD; | pYVa127/90 | CDS | 31952 | 1257 | + | 0.466985 | |
yscE | YscE | SubName: Full=YscE; | pYVa127/90 | CDS | 33205 | 204 | + | 0.426471 | |
yscF | YscF | SubName: Full=YscF; | pYVa127/90 | CDS | 33405 | 264 | + | 0.431818 | |
yscG | YscG | SubName: Full=YscG; | pYVa127/90 | CDS | 33670 | 348 | + | 0.442529 | |
yscH | YscH | SubName: Full=YscH; | pYVa127/90 | CDS | 34014 | 498 | + | 0.433735 | |
yscI | YscI | SubName: Full=YscI; | pYVa127/90 | CDS | 34512 | 348 | + | 0.471264 | |
yscJ | YscJ | SubName: Full=YscJ; | pYVa127/90 | CDS | 34866 | 735 | + | 0.431293 | |
yscK | YscK | SubName: Full=YscK; | pYVa127/90 | CDS | 35600 | 630 | + | 0.487302 | |
yscL | YscL | SubName: Full=YscL; | pYVa127/90 | CDS | 36175 | 672 | + | 0.443452 | |
yscM1 | YscM1 | SubName: Full=Regulatory protein YscM1; SubName: Full=YscM1; | pYVa127/90 | CDS | 37064 | 348 | + | 0.482759 | |
yscM2 | YscM2 | SubName: Full=Regulatory protein YscM2; SubName: Full=YscM2; | pYVa127/90 | CDS | 61818 | 351 | + | 0.37037 | |
yscN | YscN | SubName: Full=YscN; | pYVa127/90 | CDS | 20576 | 1320 | + | 0.506818 | |
yscO | YscO | SubName: Full=YscO; | pYVa127/90 | CDS | 21892 | 465 | + | 0.464516 | |
yscP | YscP | SubName: Full=YscP; | pYVa127/90 | CDS | 22356 | 1362 | + | 0.486784 | |
yscQ | YscQ | SubName: Full=YscQ; | pYVa127/90 | CDS | 23714 | 924 | + | 0.483766 | |
yscR | YscR | SubName: Full=YscR; | pYVa127/90 | CDS | 24634 | 654 | + | 0.429664 | |
yscS | YscS | SubName: Full=YscS; | pYVa127/90 | CDS | 25289 | 267 | + | 0.453184 | |
yscT | YscT | SubName: Full=YscT; | pYVa127/90 | CDS | 25552 | 786 | + | 0.428753 | |
yscU | YscU | SubName: Full=YscU; | pYVa127/90 | CDS | 26337 | 1065 | + | 0.437559 | |
yscX | YscX | RecName: Full=Yop proteins translocation protein X; | pYVa127/90 | CDS | 18515 | 369 | - | 0.493225 | |
yscY | YscY | RecName: Full=Chaperone protein YscY; AltName: Full=Yop proteins translocation protein Y; | pYVa127/90 | CDS | 18174 | 345 | - | 0.457971 |