Gene list
Applied filters:
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: pRF
Number of genes found: 68
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Rickettsia felis URRWXCal2, URRWXCal2; California 2 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RF_p06 | Type I site-specific restriction-modification system, R (restriction) subunit and related helicases | SubName: Full=Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases; | pRF | CDS | 5754 | 702 | + | 0.317664 |
NA | RF_p04 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 2618 | 321 | + | 0.239875 |
NA | RF_p22 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 19789 | 249 | - | 0.321285 |
NA | RF_p56 | Hyaluronidase | SubName: Full=Hyaluronidase; | pRF | CDS | 51891 | 1074 | - | 0.314711 |
NA | RF_p36 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 35415 | 741 | + | 0.280702 |
NA | RF_p38 | Conjugative transfer protein TraA_Ti | SubName: Full=Conjugative transfer protein TraA_Ti; | pRF | CDS | 36628 | 282 | + | 0.375887 |
NA | RF_p19 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 17327 | 1191 | - | 0.342569 |
NA | RF_p53 | DNA polymerase III, epsilon subunit-like protein | SubName: Full=DNA polymerase III, epsilon subunit-like protein; | pRF | CDS | 49641 | 543 | - | 0.333333 |
NA | RF_p67 | Transposase | SubName: Full=Transposase; | pRF | CDS | 61171 | 180 | + | 0.272222 |
NA | RF_p30 | Transposase | SubName: Full=Transposase; | pRF | CDS | 30449 | 753 | + | 0.341301 |
NA | RF_p48 | Transposase | SubName: Full=Transposase; | pRF | CDS | 46401 | 870 | - | 0.351724 |
NA | RF_p34 | DNA polymerase III, epsilon subunit-like protein | SubName: Full=DNA polymerase III, epsilon subunit-like protein; | pRF | CDS | 33232 | 1134 | - | 0.323633 |
NA | RF_p12 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 11337 | 846 | - | 0.341608 |
NA | RF_p43 | Putative conjugative transfer protein TraD_F | SubName: Full=Putative conjugative transfer protein TraD_F; | pRF | CDS | 42473 | 768 | - | 0.378906 |
NA | RF_p57 | Transposase | SubName: Full=Transposase; | pRF | CDS | 53723 | 738 | - | 0.334688 |
NA | RF_p45 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 44188 | 279 | - | 0.283154 |
NA | RF_p14 | Ankyrin repeat | RecName: Full=Putative ankyrin repeat protein RF_p14; | pRF | CDS | 13011 | 192 | - | 0.385417 |
NA | RF_p61 | Transposase | SubName: Full=Transposase; | pRF | CDS | 55764 | 1116 | - | 0.360215 |
NA | RF_p16 | Putative Zn-dependent protease | SubName: Full=Putative Zn-dependent protease; | pRF | CDS | 14298 | 534 | - | 0.359551 |
NA | RF_p42 | Ankyrin repeat | RecName: Full=Putative ankyrin repeat protein RF_p42/RF_pd42; | pRF | CDS | 41791 | 618 | - | 0.309061 |
NA | RF_p01 | Transposase | SubName: Full=Transposase; | pRF | CDS | 669 | 330 | - | 0.354545 |
NA | RF_p20 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 18456 | 540 | - | 0.287037 |
NA | RF_p47 | Conjugative transfer protein TraG | SubName: Full=Conjugative transfer protein TraG; | pRF | CDS | 45593 | 468 | - | 0.395299 |
NA | RF_p39 | Conjugative transfer protein TraA_Ti | SubName: Full=Conjugative transfer protein TraA_Ti; | pRF | CDS | 36852 | 2724 | + | 0.381791 |
NA | RF_p29 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 28872 | 663 | - | 0.349925 |
NA | RF_p65 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 59110 | 414 | + | 0.263285 |
NA | RF_p63 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 58107 | 576 | - | 0.383681 |
NA | RF_p05 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 3442 | 2325 | + | 0.31914 |
NA | RF_p66 | Site-specific recombinases | SubName: Full=Site-specific recombinases; | pRF | CDS | 60292 | 549 | + | 0.338798 |
NA | RF_p15 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 13287 | 786 | - | 0.358779 |
NA | RF_p02 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 1306 | 369 | + | 0.257453 |
NA | RF_p33 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 32624 | 444 | - | 0.355856 |
NA | RF_p27 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 26366 | 1800 | + | 0.356667 |
NA | RF_p59 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 55165 | 291 | - | 0.316151 |
NA | RF_p09 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 7925 | 384 | + | 0.351562 |
NA | RF_p31 | Transposase | SubName: Full=Transposase; | pRF | CDS | 31276 | 243 | + | 0.312757 |
NA | RF_p54 | Transposase | SubName: Full=Transposase; | pRF | CDS | 50210 | 693 | - | 0.329004 |
NA | RF_p40 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 39597 | 1074 | + | 0.346369 |
NA | RF_p44 | Putative conjugative transfer protein TraD_F | SubName: Full=Putative conjugative transfer protein TraD_F; | pRF | CDS | 43247 | 930 | - | 0.374194 |
NA | RF_p21 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 19286 | 495 | - | 0.307071 |
NA | RF_p58 | Transposase | SubName: Full=Transposase; | pRF | CDS | 54457 | 300 | - | 0.34 |
NA | RF_p60 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRF | CDS | 55504 | 204 | - | 0.318627 |
NA | RF_p10 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 8388 | 516 | - | 0.304264 |
NA | RF_p68 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 61733 | 957 | - | 0.341693 |
NA | RF_p08 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 7444 | 231 | - | 0.30303 |
NA | RF_p62 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 56892 | 1164 | - | 0.34622 |
NA | RF_p49 | Integrase | SubName: Full=Integrase; | pRF | CDS | 47293 | 192 | - | 0.302083 |
NA | RF_p24 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 20997 | 540 | + | 0.396296 |
NA | RF_p50 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 47554 | 771 | - | 0.348898 |
NA | RF_p18 | TPR, tetratricopeptide repeat domain | SubName: Full=TPR, tetratricopeptide repeat domain; | pRF | CDS | 15675 | 1260 | - | 0.359524 |
NA | RF_p07 | Type I restriction-modification system methyltransferase subunit | SubName: Full=Type I restriction-modification system methyltransferase subunit; | pRF | CDS | 6487 | 999 | + | 0.32032 |
NA | RF_p55 | Transposase | SubName: Full=Transposase; | pRF | CDS | 50971 | 507 | - | 0.329389 |
NA | RF_p46 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 44502 | 1053 | - | 0.362773 |
NA | RF_p64 | Transposase | SubName: Full=Transposase; | pRF | CDS | 58768 | 309 | + | 0.294498 |
NA | RF_p28 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 28180 | 675 | + | 0.333333 |
NA | RF_p17 | TPR, tetratricopeptide repeat domain | SubName: Full=TPR, tetratricopeptide repeat domain; | pRF | CDS | 14865 | 765 | - | 0.350327 |
NA | RF_p41 | Transposase | SubName: Full=Transposase; | pRF | CDS | 40689 | 1053 | + | 0.344729 |
hspP1 | RF_p52 | Small heat shock protein | RecName: Full=Small heat shock protein C3; | pRF | CDS | 48994 | 591 | - | 0.302876 |
hspP2 | RF_p51 | Small heat shock protein | RecName: Full=Small heat shock protein C4; | pRF | CDS | 48459 | 492 | - | 0.27439 |
lon | RF_p26 | ATP-dependent protease La, bacterial type | RecName: Full=Lon protease; EC=3.4.21.53; | pRF | CDS | 23813 | 2448 | + | 0.352124 |
parA1 | RF_p03 | Chromosome partitioning ParA family protein | SubName: Full=Chromosome partitioning ParA family protein; | pRF | CDS | 1810 | 816 | + | 0.275735 |
parA2 | RF_p23 | Plasmid stability protein ParA | SubName: Full=Plasmid stability protein ParA; | pRF | CDS | 20040 | 636 | - | 0.319182 |
parB | RF_p35 | ParB-like nuclease domain | SubName: Full=ParB-like nuclease domain; | pRF | CDS | 34391 | 759 | - | 0.364954 |
pat2 | RF_p11 | Patatin-like phospholipase | SubName: Full=Patatin-like phospholipase; | pRF | CDS | 9525 | 1611 | - | 0.384233 |
sca12 | RF_p25 | Cell surface antigen-like protein Sca12 | SubName: Full=Cell surface antigen-like protein Sca12; | pRF | CDS | 22243 | 1431 | + | 0.409504 |
tmk | RF_p13 | Thymidylate kinase | RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; | pRF | CDS | 12272 | 684 | - | 0.362573 |
tnpR | RF_p32 | TnpR resolvase | SubName: Full=TnpR resolvase; | pRF | CDS | 32042 | 441 | + | 0.378685 |
traD_Ti | RF_p37 | Conjugative transfer protein TraD_Ti | SubName: Full=Conjugative transfer protein TraD_Ti; | pRF | CDS | 36409 | 258 | - | 0.337209 |