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2024-05-02 23:48:55

Gene list

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Organism: Escherichia coli, JEF100

Number of genes found: 336

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Escherichia coli, JEF100
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pCoo repeat_unit48392 768 + 0.520833
NA pCoo misc_feature4477 183 - 0.442623
NA pCoo092 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS72494 309 + 0.533981
NA pCoo repeat_unit17305 5 + 0.2
NA pCoo misc_feature21422 129 + 0.356589
NA pCoo repeat_region53684 2534 - 0.528808
NA pCoo misc_feature25222 561 + 0.479501
NA pCoo repeat_unit81560 19 + 0.631579
NA pCoo misc_feature83890 318 - 0.430818
NA pCoo misc_feature84364 336 - 0.404762
NA pCoo033 TraK-X deletion and fusion proteinSubName: Full=TraK-X deletion and fusion protein; pCoo CDS25775 597 + 0.547739
NA pCoo misc_feature30654 453 + 0.465784
NA pCoo repeat_unit82066 19 - 0.631579
NA pCoo070 putative IS element proteinSubName: Full=ECs1337; SubName: Full=ECs1337 protein; SubName: Full=IS66 family element orf1; SubName: Full=Putative IS element protein; SubName: Full=Transposase; SubName: Full=Uncharacterized protein; pCoo CDS55706 426 - 0.49061
NA pCoo repeat_region17305 2526 + 0.561362
NA pCoo misc_feature23874 66 + 0.378788
NA pCoo repeat_unit8469 148 - 0.358108
NA pCoo misc_feature16340 534 - 0.543071
NA pCoo repeat_unit19618 213 + 0.549296
NA pCoo repeat_unit68380 8 + 0.375
NA pCoo misc_feature88744 1230 - 0.491057
NA pCoo repeat_unit46905 17 + 0.0588235
NA pCoo repeat_unit1961 371 + 0.568733
NA pCoo misc_feature93776 126 - 0.373016
NA pCoo misc_feature91615 94 - 0.510638
NA pCoo misc_feature95773 33 - 0.515152
NA pCoo053 putative resolvaseSubName: Full=Putative resolvase; pCoo CDS39016 642 + 0.478193
NA pCoo misc_feature25775 522 + 0.555556
NA pCoo repeat_unit46922 768 - 0.527344
NA pCoo073 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS57339 315 + 0.568254
NA pCoo misc_feature86258 393 - 0.455471
NA pCoo misc_feature58611 540 - 0.511111
NA pCoo misc_feature45980 187 - 0.363636
NA pCoo026 IS element transposase (fragment) pCoo pseudo21753 195 - 0.420513
NA pCoo080 insertion element IS629 proteinSubName: Full=Genes for Stx2 variant A and B subunit, ORFa and ORFb; SubName: Full=IS1203v protein; SubName: Full=Insertion element IS629 protein; SubName: Full=Orf327 protein; SubName: Full=Putative insertion sequence related protein; SubName: Full=Putative transposase; SubName: Full=Putative transposase OrfA; SubName: Full=Uncharacterized protein; pCoo CDS61895 327 + 0.544343
NA pCoo misc_feature32896 69 - 0.42029
NA pCoo misc_feature15492 540 - 0.512963
NA pCoo039 prophage protein gp48SubName: Full=Prophage protein gp48; pCoo CDS29984 288 + 0.4375
NA pCoo misc_feature32107 888 - 0.433559
NA pCoo misc_feature39031 27 + 0.481481
NA pCoo misc_feature61904 261 + 0.555556
NA pCoo misc_feature50147 972 + 0.457819
NA pCoo misc_feature48447 264 + 0.515152
NA pCoo repeat_unit19805 26 - 0.538462
NA pCoo027 putative transglycosyloase (X polypeptide) (pseudogene) pCoo pseudo22316 420 - 0.42381
NA pCoo repeat_region61840 1312 + 0.538872
NA pCoo misc_feature25438 66 + 0.560606
NA pCoo misc_feature73376 45 + 0.466667
NA pCoo misc_feature68667 58 + 0.275862
NA pCoo099 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS78052 375 + 0.530667
NA pCoo misc_feature88646 106 - 0.377358
NA pCoo misc_feature84483 384 - 0.40625
NA pCoo misc_feature42075 825 - 0.44
NA pCoo misc_feature41439 138 + 0.275362
NA pCoo misc_feature27866 786 + 0.568702
NA pCoo repeat_region67620 8 + 0.375
NA pCoo078 putative IS100 transposaseSubName: Full=IS100 transposase; SubName: Full=Putative IS100 transposase; pCoo CDS59315 1023 - 0.528837
NA pCoo misc_feature39565 66 + 0.545455
NA pCoo084 transcriptional regulator (pseudogene) pCoo pseudo66793 432 + 0.277778
NA pCoo misc_feature71344 144 - 0.263889
NA pCoo misc_feature9349 441 + 0.455782
NA pCoo misc_feature17490 255 + 0.501961
NA pCoo repeat_unit47690 17 + 0.0588235
NA pCoo repeat_unit58470 1954 + 0.516377
NA pCoo007 IS3 family transposase pCoo pseudo5047 819 + 0.494505
NA pCoo misc_feature9280 67 + 0.41791
NA pCoo repeat_unit6365 148 + 0.358108
NA pCoo083 putative IS element transposase (partial) pCoo pseudo65778 114 + 0.570175
NA pCoo misc_feature37667 303 + 0.534653
NA pCoo misc_feature47380 66 - 0.530303
NA pCoo misc_feature30095 165 + 0.466667
NA pCoo misc_feature93136 91 - 0.43956
NA pCoo079 group II intron-encoded reverse transcriptase/maturase (pseudogene) pCoo pseudo60921 1203 + 0.482959
NA pCoo repeat_unit14268 33 - 0.363636
NA pCoo misc_feature25255 69 + 0.434783
NA pCoo063 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS49291 468 + 0.412393
NA pCoo misc_feature5377 486 + 0.504115
NA pCoo097 resolvaseSubName: Full=ResA; SubName: Full=Resolvase; pCoo CDS76033 786 + 0.59542
NA pCoo019 IS100 transposaseSubName: Full=IS100 transposase; SubName: Full=Putative IS100 transposase; pCoo CDS16196 1023 - 0.528837
NA pCoo098 parA-like proteinSubName: Full=ParA; SubName: Full=ParA-like protein; SubName: Full=Putative plasmid partitioning and stability protein; pCoo CDS77420 633 + 0.467615
NA pCoo022 IS element transposaseSubName: Full=IS element transposase; SubName: Full=Uncharacterized protein; pCoo CDS18228 1572 + 0.571883
NA pCoo misc_feature4033 333 - 0.489489
NA pCoo misc_feature25222 100 + 0.42
NA pCoo046 glycosyl transferaseSubName: Full=Glycosyl transferase; pCoo CDS34038 1089 - 0.426079
NA pCoo020 IS element transposase (pseudogene) pCoo pseudo17307 555 + 0.538739
NA pCoo misc_feature60287 204 - 0.5
NA pCoo repeat_region58285 180 + 0.466667
NA pCoo misc_feature17876 327 + 0.58104
NA pCoo repeat_unit15351 28 + 0.464286
NA pCoo repeat_unit17277 28 - 0.5
NA pCoo misc_feature83324 24 - 0.458333
NA pCoo misc_feature83693 69 - 0.565217
NA pCoo008 IS629-family transposase (fragment) pCoo pseudo5903 102 - 0.509804
NA pCoo repeat_unit19743 94 + 0.5
NA pCoo repeat_unit36557 139 + 0.676259
NA pCoo misc_feature90857 243 - 0.493827
NA pCoo088 putative transposase for insertion sequence element IS186SubName: Full=Putative transposase for insertion sequence element IS186; pCoo CDS69139 1197 - 0.503759
NA pCoo misc_feature74425 396 - 0.608586
NA pCoo repeat_unit56218 6 + 0.5
NA pCoo misc_feature24915 285 + 0.484211
NA pCoo repeat_unit37995 686 + 0.572886
NA pCoo010 integrase (pseudogene) pCoo pseudo6519 207 - 0.545894
NA pCoo misc_feature32874 145 - 0.344828
NA pCoo misc_feature2674 102 + 0.529412
NA pCoo090 putative IS element transposase (fragment) pCoo pseudo71772 237 + 0.493671
NA pCoo081 transposase for insertion sequence element IS629 (contains group II intron)SubName: Full=Genes for Stx2 variant A and B subunit, ORFa and ORFb; SubName: Full=IS1203v protein; SubName: Full=Orf891 protein; SubName: Full=Putative transposase; SubName: Full=Transposase for insertion sequence element IS629 (Contains group II intron); pCoo CDS62218 891 + 0.538721
NA pCoo repeat_unit82093 19 + 0.631579
NA pCoo stem_loop22691 18 + 0.277778
NA pCoo repeat_unit53684 25 + 0.56
NA pCoo repeat_unit82648 19 - 0.631579
NA pCoo055 putative AraC family regulatory proteinSubName: Full=Putative AraC family regulatory protein; pCoo CDS41025 705 + 0.326241
NA pCoo048 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS36215 531 - 0.608286
NA pCoo094 conserved hypothetical protein (fragment) pCoo pseudo73358 897 + 0.488294
NA pCoo misc_feature84905 79 - 0.455696
NA pCoo129 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS97615 264 - 0.5
NA pCoo049 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS36745 258 - 0.5
NA pCoo misc_feature48749 390 + 0.530769
NA pCoo021 IS element transposaseSubName: Full=Aec52; SubName: Full=IS element transposase; SubName: Full=IS66 family element, orf2; SubName: Full=IS66 family transposase; SubName: Full=IS66 family transposase ORF2; SubName: Full=Putative transposase subunit; SubName: Full=Transposase; SubName: Full=Uncharacterized protein; pCoo CDS17861 348 + 0.563218
NA pCoo misc_feature55862 240 - 0.458333
NA pCoo misc_feature47566 24 - 0.625
NA pCoo misc_feature67684 261 + 0.521073
NA pCoo repeat_unit58470 28 + 0.464286
NA pCoo repeat_unit60424 1314 - 0.531202
NA pCoo misc_feature94274 79 - 0.278481
NA pCoo misc_feature60215 120 - 0.458333
NA pCoo repeat_unit15346 5 + 0.4
NA pCoo067 conserved hypothetical protein (partial) pCoo pseudo53067 297 + 0.569024
NA pCoo misc_feature42993 354 - 0.429379
NA pCoo087 hypothetical secreted proteinSubName: Full=Hypothetical secreted protein; pCoo CDS68667 369 + 0.409214
NA pCoo repeat_unit82977 19 - 0.578947
NA pCoo043 IS630 transposase (fragment) pCoo pseudo31770 243 + 0.485597
NA pCoo003 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2396 270 + 0.518519
NA pCoo089 AraC-family trancriptional regulatorSubName: Full=AraC-family trancriptional regulator; pCoo CDS70651 861 - 0.321719
NA pCoo misc_feature90044 726 - 0.476584
NA pCoo misc_feature6841 720 - 0.465278
NA pCoo misc_feature52453 339 + 0.463127
NA pCoo misc_feature7786 246 - 0.369919
NA pCoo stem_loop22713 18 + 0.277778
NA pCoo034 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS26615 366 + 0.530055
NA pCoo misc_feature60221 66 - 0.515152
NA pCoo misc_feature12501 1080 + 0.387963
NA pCoo misc_feature57870 69 + 0.507246
NA pCoo repeat_unit31674 94 + 0.457447
NA pCoo076 IS element transposase (pseudogene) pCoo pseudo58359 111 + 0.468468
NA pCoo060 IS element transposase (pseudogene) pCoo pseudo48179 207 + 0.400966
NA pCoo repeat_unit29180 373 + 0.55496
NA pCoo misc_feature47755 306 - 0.493464
NA pCoo misc_feature39022 480 + 0.475
NA pCoo025 putative integral membrane proteinSubName: Full=Putative integral membrane protein; pCoo CDS21332 261 + 0.356322
NA pCoo077 putative IS100 element ATP-binding proteinSubName: Full=IS100 transposase transposase ORFA; SubName: Full=ORF B protein; SubName: Full=OrfB protein of IS100 transposase; SubName: Full=OrfB protein, transposase, IS100; SubName: Full=Putative IS100 element ATP-binding protein; SubName: Full=Putative IS100 transposase ATP-binding protein; SubName: Full=Putative transposase; SubName: Full=Putative transposase protein; pCoo CDS58536 780 - 0.505128
NA pCoo085 IS1-family insertion element proteinSubName: Full=IS1-family insertion element protein; pCoo CDS67684 273 + 0.509158
NA pCoo misc_feature62590 477 + 0.549266
NA pCoo misc_feature71194 135 - 0.37037
NA pCoo misc_feature15849 24 - 0.625
NA pCoo misc_feature41592 132 + 0.348485
NA pCoo misc_feature87167 885 - 0.479096
NA pCoo misc_feature61985 66 + 0.575758
NA pCoo misc_feature72602 138 + 0.521739
NA pCoo misc_feature22055 327 - 0.452599
NA pCoo misc_feature78665 960 + 0.458333
NA pCoo misc_feature61056 678 + 0.485251
NA pCoo repeat_unit60396 28 - 0.5
NA pCoo repeat_unit58279 6 +
NA pCoo repeat_unit60627 33 + 0.424242
NA pCoo misc_feature35306 480 - 0.379167
NA pCoo misc_feature91628 33 - 0.545455
NA pCoo misc_feature14319 498 - 0.554217
NA pCoo repeat_unit19831 6 +
NA pCoo misc_feature85661 375 - 0.445333
NA pCoo repeat_unit15351 1954 + 0.516888
NA pCoo misc_feature21774 144 - 0.409722
NA pCoo repeat_region3767 1280 + 0.461719
NA pCoo misc_feature34104 510 - 0.47451
NA pCoo038 prophage protein gp49SubName: Full=Prophage protein gp49; pCoo CDS29673 312 + 0.455128
NA pCoo103 conserved hypothetical protein (pseudogene) pCoo pseudo80925 315 + 0.653968
NA pCoo repeat_unit60424 5 + 0.4
NA pCoo091 immunity protein for colicin IbSubName: Full=Colicin Ib immunity protein; SubName: Full=Immunity protein for colicin Ib; pCoo CDS71953 384 - 0.356771
NA pCoo misc_feature87572 24 - 0.583333
NA pCoo misc_feature76486 66 + 0.590909
NA pCoo misc_feature85464 69 - 0.391304
NA pCoo misc_feature22910 381 + 0.393701
NA pCoo misc_feature24996 69 + 0.434783
NA pCoo repeat_unit68357 23 + 0.391304
NA pCoo069 putative IS element proteinSubName: Full=ECs1338; SubName: Full=Hypothetical 12.8 kDa protein y4hO; SubName: Full=IS66 family transposase orf2; SubName: Full=Putative IS element protein; SubName: Full=TnpA; SubName: Full=Transposase; SubName: Full=Transposase 5; SubName: Full=Uncharacterized protein; pCoo CDS55359 351 - 0.524217
NA pCoo misc_feature94278 123 - 0.341463
NA pCoo018 putative IS100 transposase ATP-binding proteinSubName: Full=IS100 transposase transposase ORFA; SubName: Full=ORF B protein; SubName: Full=OrfB protein of IS100 transposase; SubName: Full=OrfB protein, transposase, IS100; SubName: Full=Putative IS100 element ATP-binding protein; SubName: Full=Putative IS100 transposase ATP-binding protein; SubName: Full=Putative transposase; SubName: Full=Putative transposase protein; pCoo CDS15417 780 - 0.50641
NA pCoo misc_feature72094 108 - 0.333333
NA pCoo misc_feature86276 207 - 0.386473
NA pCoo repeat_unit36214 361 + 0.592798
NA pCoo misc_feature59459 534 - 0.543071
NA pCoo misc_feature33125 855 - 0.424561
NA pCoo misc_feature41478 66 + 0.30303
NA pCoo misc_feature25775 70 + 0.485714
NA pCoo misc_feature93176 33 - 0.454545
NA pCoo misc_feature17096 120 - 0.458333
NA pCoo misc_feature30122 66 + 0.560606
NA pCoo024 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS20779 258 + 0.468992
NA pCoo repeat_unit53678 6 + 0.5
NA pCoo045 virK homologueSubName: Full=VirK homologue; pCoo CDS33083 951 - 0.410095
NA pCoo086 IS1-family insertion element protein (pseudogene) pCoo pseudo67983 384 + 0.494792
NA pCoo misc_feature17102 66 - 0.515152
NA pCoo misc_feature91725 408 - 0.477941
NA pCoo repeat_unit19965 488 + 0.60041
NA pCoo misc_feature6365 2252 + 0.420071
NA pCoo misc_feature38360 66 + 0.575758
NA pCoo repeat_unit49137 23 + 0.391304
NA pCoo095 PIN-domain containing proteinRecName: Full=tRNA(fMet)-specific endonuclease VapC; EC=3.1.-.-; AltName: Full=RNase VapC; AltName: Full=Toxin VapC; pCoo CDS74416 417 - 0.597122
NA pCoo misc_feature97524 66 - 0.530303
NA pCoo misc_feature24635 198 + 0.530303
NA pCoo misc_feature12492 58 + 0.362069
NA pCoo repeat_unit61849 147 + 0.482993
NA pCoo093 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS72820 507 - 0.64497
NA pCoo misc_feature6525 141 - 0.595745
NA pCoo repeat_unit61840 26 + 0.576923
NA pCoo misc_feature37447 216 + 0.518519
NA pCoo misc_feature56741 96 + 0.552083
NA pCoo repeat_unit56217 488 + 0.60041
NA pCoo misc_feature97800 79 - 0.493671
NA pCoo054 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS40097 681 - 0.311307
NA pCoo misc_feature58968 24 - 0.625
NA pCoo misc_feature9877 70 + 0.428571
NA pCoo repeat_unit56193 25 - 0.52
NA pCoo repeat_unit81533 19 - 0.631579
NA pCoo006 IS element transposase (pseudogene) pCoo pseudo4165 999 - 0.47047
NA pCoo repeat_unit65396 26 - 0.615385
NA pCoo repeat_unit2787 55 + 0.545455
NA pCoo repeat_unit58285 26 + 0.423077
NA pCoo misc_feature18639 597 + 0.58794
NA pCoo082 group II intron-encoded reverse transcriptase/maturaseSubName: Full=Group II intron-encoded reverse transcriptase/maturase; pCoo CDS63307 1509 + 0.533466
NA pCoo repeat_region67628 752 + 0.49734
NA pCoo misc_feature56842 492 + 0.609756
NA pCoo004 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2662 195 + 0.497436
NA pCoo misc_feature57867 150 + 0.54
NA pCoo096 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS75579 453 + 0.562914
NA pCoo repeat_unit58465 5 + 0.2
NA pCoo068 putative IS element transposaseSubName: Full=ECs1339; SubName: Full=Putative IS element transposase; pCoo CDS53715 1614 - 0.54399
NA pCoo005 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS2884 699 + 0.439199
NA pCoo repeat_unit46922 23 - 0.434783
NA pCoo misc_feature24536 357 + 0.526611
NA pCoo misc_feature43767 2259 - 0.392652
NA pCoo misc_feature63535 768 + 0.542969
NA pCoo misc_feature48492 24 + 0.541667
NA pCoo misc_feature25793 372 + 0.567204
NA pCoo misc_feature83030 753 - 0.482072
NA pCoo041 IS91 transposase (fragment) pCoo pseudo31462 219 - 0.538813
NA pCoo misc_feature72256 198 - 0.318182
NA pCoo repeat_unit72819 361 + 0.631579
NA pCoo misc_feature76132 615 + 0.593496
NA pCoo misc_feature40136 627 - 0.311005
NA pCoo103 conserved hypothetical protein (fragment) pCoo pseudo80662 267 + 0.543071
NA pCoo misc_feature67986 378 + 0.497355
NA conserved hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS80409 270 + 0.622222
NA pCoo repeat_unit47667 23 + 0.478261
NA pCoo repeat_unit65776 223 + 0.547085
NA pCoo misc_feature62636 2270 + 0.540969
NA pCoo017 transposase insC for insertion element IS2 (pseudogene) pCoo pseudo60424 279 - 0.53405
NA pCoo misc_feature55368 327 - 0.535168
NA pCoo023 hypothetical proteinSubName: Full=Uncharacterized protein; pCoo CDS20406 294 - 0.527211
NA pCoo042 IS679 transposase (fragment) pCoo pseudo31674 54 + 0.518519
NA pCoo repeat_unit73222 139 + 0.669065
NA pCoo misc_feature69292 714 - 0.495798
NA pCoo misc_feature41583 126 + 0.380952
NA pCoo016 transposase insD for insertion element IS2SubName: Full=Is2 element protein; SubName: Full=Transposase; SubName: Full=Transposase insD for insertion element IS2; SubName: Full=Transposase insd for insertion element is2-10; SubName: Full=Transposase insd for insertion element is2-12; SubName: Full=Transposase insd for insertion element is2-9; pCoo CDS14271 906 - 0.550773
NA pCoo misc_feature95418 129 - 0.395349
NA pCoo misc_feature54279 609 - 0.558292
NA pCoo repeat_unit76121 686 + 0.591837
NA pCoo repeat_unit48392 23 - 0.434783
NA pCoo repeat_unit5904 147 - 0.496599
NA pCoo misc_feature55976 66 - 0.409091
NA pCoo misc_feature48636 66 + 0.530303
NA pCoo misc_feature38006 615 + 0.57561
NA pCoo066 IS element transposaseSubName: Full=IS element transposase; pCoo CDS51895 1017 + 0.462144
NA pCoo repeat_unit67628 23 - 0.434783
RNA-I pCoo misc_RNA27674 93 - 0.451613
aphA pCoo011 aminoglycoside 3'-phosphotransferase (Kanamycin resistance-artifical insertion)SubName: Full=Aminoglycoside 3-phosphotransferase (Kanamycin resistance-artifical insertion); EC=2.7.1.95; pCoo CDS6817 786 - 0.450382
ccdA pCoo050 CcdA antitoxin proteinSubName: Full=CcdA; SubName: Full=CcdA antitoxin protein; SubName: Full=CcdA protein; SubName: Full=Plasmid maintenance protein CcdA (LetA protein) (Protein H); SubName: Full=Plasmid toxin addiction system protein CcdA; SubName: Full=Post-segregation antitoxin; pCoo CDS37447 219 + 0.515982
ccdB pCoo051 cytotoxic protein CcdBSubName: Full=Cytotoxic protein CcdB; SubName: Full=Cytotoxic protein CcdB (LetB protein) (Protein G); SubName: Full=Plasmid toxin addiction system protein CcdB; SubName: Full=Post-segregation toxin; SubName: Full=Toxin protein; pCoo CDS37667 306 + 0.529412
cooA pCoo013 CS1 fimbrial subunit A precursorSubName: Full=CS1 fimbrial subunit A; SubName: Full=CfaA; SubName: Full=CooA; pCoo CDS9280 516 + 0.45155
cooB pCoo009 CS1 fimbrial subunit B precursorSubName: Full=CS1 fimbrial subunit B; SubName: Full=CfaB; SubName: Full=CooB; pCoo CDS6261 717 + 0.368201
cooC pCoo014 CooC precursor (Usher protein)SubName: Full=CooC; SubName: Full=CooC (Usher protein); Flags: Precursor; pCoo CDS9877 2619 + 0.383734
cooD pCoo015 CooD precursorSubName: Full=CfaD; SubName: Full=CooD; Flags: Precursor; pCoo CDS12492 1092 + 0.386447
def pCoo040 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; pCoo CDS30648 510 + 0.462745
eatA pCoo056 secreted autotransporter serine protease EatASubName: Full=Secreted autotransporter serine protease EatA; pCoo CDS42072 4095 - 0.406838
hok pCoo075 post-segregation killing proteinSubName: Full=Hok/gef cell toxic protein; SubName: Full=Post segregation killing protein; SubName: Full=Post-segregation killing protein; SubName: Full=Stable plasmid inheritance protein Hok; pCoo CDS57861 162 + 0.518519
insA pCoo061 insertion element IS1 protein InsASubName: Full=Insertion element IS1 protein InsA; pCoo CDS48447 276 + 0.518116
insA pCoo059 insertion element IS1 protein InsASubName: Full=Insertion element IS1 protein InsA; pCoo CDS47359 276 - 0.532609
insB pCoo062 insertion element IS1 protein InsB (pseudogene) pCoo pseudo48641 501 + 0.536926
insB pCoo058 insertion element IS1 protein InsBSubName: Full=Insertion element IS1 protein InsB; pCoo CDS46937 504 - 0.535714
mok pCoo074 modulator of hok proteinSubName: Full=Modulator of hok protein; pCoo CDS57803 216 + 0.50463
msbB pCoo044 lipid A biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferaseSubName: Full=Lipid A biosynthesis (Kdo)2-(Lauroyl)-lipid iva acyltransferase; EC=2.3.1.-; pCoo CDS32074 945 - 0.42963
parA pCoo064 partition protein ParASubName: Full=Partition protein ParA; pCoo CDS50147 981 + 0.457696
parB pCoo065 partition protein ParBSubName: Full=Partition protein ParB; pCoo CDS51130 423 + 0.439716
pilI pCoo123 PilI proteinSubName: Full=PilI; SubName: Full=PilI protein; SubName: Full=Uncharacterized protein; pCoo CDS94395 255 - 0.580392
pilJ pCoo122 PilJ proteinSubName: Full=PilJ; SubName: Full=PilJ protein; pCoo CDS93900 453 - 0.350993
pilK pCoo121 PilK proteinSubName: Full=IncI1 conjugal transfer protein PilK; SubName: Full=PilK; SubName: Full=PilK protein; pCoo CDS93260 591 - 0.370558
pilL pCoo120 lipoprotein (PilL protein)SubName: Full=IncI1 conjugal transfer protein PilL; SubName: Full=Lipoprotein (PilL protein); SubName: Full=PilL; pCoo CDS92159 1068 - 0.500936
pilM pCoo119 PilM proteinSubName: Full=IncI1 conjugal transfer protein PilM; SubName: Full=PilM; SubName: Full=PilM protein; SubName: Full=PilM, type IV pilus biogenesis protein; pCoo CDS91722 438 - 0.486301
pilN pCoo118 lipoprotein (PilN protein)SubName: Full=Lipoprotein (PilN protein); SubName: Full=PilN; pCoo CDS90026 1683 - 0.492573
pilO pCoo117 PilO proteinSubName: Full=IncI1 conjugal transfer protein PilO; SubName: Full=PilO; SubName: Full=PilO protein; pCoo CDS88738 1296 - 0.487654
pilP pCoo116 PilP proteinSubName: Full=IncI1 conjugal transfer pilus biogenesis protein PilP; SubName: Full=PilP; SubName: Full=PilP protein; pCoo CDS88299 453 - 0.439294
pilQ pCoo115 nucleotide-binding proteinSubName: Full=IncI1 conjugal transfer protein PilQ; SubName: Full=Nucleotide-binding protein; SubName: Full=PilQ; SubName: Full=PilQ type IV pilus ATPase; SubName: Full=PilQ, type IV pilus ATPase; pCoo CDS86735 1554 - 0.469755
pilR pCoo114 integral membrane proteinSubName: Full=IncI1 conjugal transfer protein PilR; SubName: Full=Integral membrane protein; SubName: Full=PilR; SubName: Full=PilR, integral membrane protein; pCoo CDS85625 1098 - 0.443534
pilS pCoo113 type IV prepilinSubName: Full=IncI1 conjugal transfer pilus protein PilS; SubName: Full=PilS; SubName: Full=PilS, typeIV prepilin; SubName: Full=Type IV prepilin; SubName: Full=TypeIV prepilin; pCoo CDS84993 615 - 0.437398
pilT pCoo112 putative transglycosylase PilTSubName: Full=IncI1 conjugal transfer transglycosylase protein PilT; SubName: Full=PilT; SubName: Full=Putative transglycosylase PilT; pCoo CDS84423 561 - 0.434938
pilU pCoo111 prepilin peptidaseSubName: Full=PilU; SubName: Full=Prepilin peptidase; EC=3.4.23.43; pCoo CDS83782 657 - 0.420091
pilV pCoo110 typeIV prepilin (truncated)SubName: Full=TypeIV prepilin (Truncated); pCoo CDS83024 759 - 0.480896
pilV' pCoo109 pilV alternative C-terminus (fragment) pCoo pseudo82695 300 - 0.42
pilV' pCoo108 pilV alternative C-terminus (fragment) pCoo pseudo82312 354 - 0.446328
pilV' pCoo106 pilV alternative C-terminus (fragment) pCoo pseudo81820 264 - 0.488636
pilV' pCoo107 pilV alternative C-terminus (fragment) pCoo pseudo82094 222 + 0.495495
pilV' pCoo104 pilV alternative C-terminus (fragment) pCoo pseudo81287 264 - 0.450758
pilV' pCoo105 pilV alternative C-terminus (fragment) pCoo pseudo81561 258 + 0.410853
psiA pCoo072 plasmid SOS inhibition protein (partial) pCoo pseudo56842 501 + 0.612774
repA pCoo002 replication initiation proteinSubName: Full=Replication initiation protein; pCoo CDS456 1032 + 0.555233
repA1 pCoo036 replication initiation protein RepASubName: Full=FII replication protein; SubName: Full=Replication initiation protein RepA; pCoo CDS27845 858 + 0.562937
repA2 pCoo035 replication regulatory protein RepA2SubName: Full=Replication regulatory protein; SubName: Full=Replication regulatory protein RepA2; pCoo CDS27285 258 + 0.484496
repA4 pCoo037 hypothetical protein RepA4 (pseudogene) pCoo pseudo29065 387 + 0.568475
repA6 pCoo035a positive regulator of repfic repa1 expression (repa1 leader peptide)SubName: Full=Positive regulator of repfic repa1 expression (Repa1 leader peptide); pCoo CDS27778 75 + 0.466667
repY pCoo001 RepY proteinSubName: Full=RepY protein; pCoo CDS379 90 + 0.488889
resD pCoo052 putative resolvaseSubName: Full=Putative resolvase; pCoo CDS38000 687 + 0.569141
sat4 pCoo012 streptothricin acetyltransferase (pseudogene) pCoo pseudo7945 471 - 0.380042
shf pCoo047 putative polysaccharide deacetylaseSubName: Full=Putative polysaccharide deacetylase; pCoo CDS35129 822 - 0.391728
sok pCoo misc_RNA57751 65 - 0.461538
ssb pCoo071 single-strand binding protein (partial) pCoo pseudo56687 156 + 0.519231
stbA pCoo100 plasmid stability protein StbASubName: Full=Plasmid stability protein StbA; SubName: Full=StbA; pCoo CDS78665 975 + 0.458462
stbB pCoo101 plasmid stability protein StbBSubName: Full=Plasmid stability protein StbB; SubName: Full=StbB; pCoo CDS79643 393 + 0.501272
tnpA pCoo057 transposase for transposon gamma-delta (pseudogene) pCoo pseudo47911 384 - 0.455729
traA pCoo128 TraA proteinSubName: Full=TraA protein; pCoo CDS97410 237 - 0.434599
traA pCoo030 fimbrial protein precursorSubName: Full=Fimbrial protein; pCoo CDS24536 360 + 0.525
traB pCoo127 TraB proteinSubName: Full=IncI1 conjugal transfer protein TraC; SubName: Full=TraB; SubName: Full=TraB protein; pCoo CDS96435 534 - 0.432584
traC pCoo126 TraC proteinSubName: Full=IncI1 conjugal transfer protein TraC; SubName: Full=TraC; SubName: Full=TraC protein; pCoo CDS95497 684 - 0.504386
traD pCoo125 TraD proteinSubName: Full=TraD; SubName: Full=TraD protein; pCoo CDS94917 567 - 0.430335
traE pCoo032 TraE proteinSubName: Full=F-pilus assembly protein; SubName: Full=TraE protein; pCoo CDS25222 564 + 0.47695
traJ pCoo029 TraJ proteinSubName: Full=TraJ protein; pCoo CDS23775 282 + 0.37234
traL pCoo031 TraL proteinSubName: Full=TraL protein; pCoo CDS24897 306 + 0.473856
traM pCoo028 TraM proteinSubName: Full=TraM protein; pCoo CDS22910 387 + 0.395349