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2024-05-02 21:35:29

Gene list

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Organism: Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67

Number of genes found: 205

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Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SCH_167 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS126223 348 - 0.474138
NA pSC138 repeat_region12035 918 - 0.625272
NA SCH_039 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS30035 1593 - 0.37602
NA SCH_143 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS104875 1992 + 0.38253
NA SCH_085 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS67389 99 + 0.525253
NA SCH_104 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS82592 375 + 0.624
NA SCH_171 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS131454 2583 + 0.433604
NA SCH_129 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS95830 222 - 0.536036
NA SCH_064 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS50174 642 + 0.409657
NA SCH_087 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS67864 144 + 0.354167
NA SCH_141 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS101637 1392 + 0.402299
NA SCH_146 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS108525 1182 - 0.385787
NA SCH_061 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS48611 225 + 0.608889
NA SCH_001 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS466 354 + 0.646893
NA SCH_128 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS95382 435 - 0.593103
NA SCH_152 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS113896 387 - 0.612403
NA SCH_113 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS86081 330 + 0.621212
NA SCH_098 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS77821 96 - 0.427083
NA SCH_081 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS65703 210 - 0.390476
NA pSC138 repeat_region5814 2973 - 0.60444
NA SCH_135 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS98856 348 + 0.451149
NA SCH_144 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS106868 441 + 0.342404
NA SCH_142 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS103028 1851 + 0.383036
NA pSC138 repeat_region12955 486 - 0.578189
NA SCH_041 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS32105 954 - 0.348008
NA pSC138 repeat_region13657 978 + 0.537832
NA SCH_145 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS107564 960 - 0.398958
NA SCH_151 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS113298 507 + 0.473373
NA SCH_107 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS83449 207 - 0.512077
NA SCH_054 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS42977 609 - 0.596059
NA pSC138 repeat_region15788 40 + 0.5
NA SCH_012 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS10805 435 - 0.508046
NA pSC138 repeat_region138055 675 - 0.660741
NA pSC138 repeat_region42071 859 - 0.523865
NA SCH_019 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS15718 93 - 0.311828
NA SCH_164 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS125322 180 - 0.466667
NA SCH_149 orf44SubName: Full=Orf44; pSC138 CDS112815 252 + 0.507937
NA SCH_147 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS110061 1089 + 0.370064
NA pSC138 repeat_region8789 300 - 0.59
NA SCH_150 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS113120 306 + 0.444444
NA SCH_059 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS47279 492 - 0.650406
NA SCH_002 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS1068 393 + 0.613232
NA SCH_082 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS66196 285 + 0.368421
NA SCH_118 ParB-like nucleaseSubName: Full=ParB-like nuclease; pSC138 CDS89463 1965 - 0.584224
NA pSC138 repeat_region4801 675 - 0.660741
NA SCH_136 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS99298 972 - 0.541152
NA SCH_163 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS124205 1074 - 0.487896
NA SCH_170 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS129244 2208 + 0.42663
NA SCH_131 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS96842 126 + 0.619048
NA pSC138 repeat_region44552 1354 + 0.60192
NA SCH_140 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS101499 1530 + 0.396732
NA pSC138 repeat_region22815 387 + 0.547804
NA SCH_042 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS33092 906 - 0.355408
NA SCH_083 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS66545 297 - 0.484848
NA SCH_094 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS73205 93 + 0.462366
NA pSC138 repeat_region45648 609 + 0.633826
NA SCH_121 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS92419 333 + 0.642643
NA pSC138 repeat_region134082 213 - 0.488263
NA SCH_031 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS25324 126 - 0.531746
NA pSC138 repeat_region9101 823 + 0.526124
NA SCH_040 AGR_L_2662pSubName: Full=AGR_L_2662p; pSC138 CDS31624 489 - 0.357873
NA SCH_124 unknownSubName: Full=Uncharacterized protein; pSC138 CDS93067 192 - 0.505208
NA SCH_155 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS118727 198 - 0.510101
NA SCH_162 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS123414 714 + 0.529412
NA pSC138 repeat_region23218 1354 - 0.601182
NA SCH_105 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS82936 198 + 0.454545
NA pSC138 repeat_region39660 866 - 0.528868
IS1 pSC138 repeat_region46477 821 + 0.52497
IS1 pSC138 repeat_region22040 822 + 0.523114
IS1 pSC138 repeat_region20180 820 + 0.52439
IS1 pSC138 repeat_region49264 698 + 0.545845
IS1 pSC138 repeat_region57579 821 - 0.518879
IS1 pSC138 repeat_region51909 821 + 0.52497
IS1 pSC138 repeat_region34423 821 + 0.518879
IS1 pSC138 repeat_region137167 378 + 0.560847
IS1 pSC138 repeat_region29322 821 + 0.52497
IS1-like pSC138 repeat_region123186 821 - 0.521315
IS26 pSC138 repeat_region13427 821 - 0.52497
IS26 pSC138 repeat_region11322 820 + 0.52439
IS406 pSC138 repeat_region38288 687 + 0.518195
IS407 pSC138 repeat_region135314 264 - 0.534091
IS476 pSC138 repeat_region134457 834 - 0.535971
ISECp1 pSC138 repeat_region68464 1263 + 0.339667
aadA2 SCH_032 streptomycin/spectinomycin 3' adenyl transferaseRecName: Full=Streptomycin 3-adenylyltransferase; EC=2.7.7.47; pSC138 CDS25483 792 + 0.518939
aadA2 SCH_053 streptomycin 3''-adenyl transferaseRecName: Full=Streptomycin 3-adenylyltransferase; EC=2.7.7.47; pSC138 CDS42128 804 - 0.518657
aadA2 SCH_051 aminoglycoside adenyltransferaseRecName: Full=Streptomycin 3-adenylyltransferase; EC=2.7.7.47; pSC138 CDS39723 792 - 0.52904
ampC SCH_090 extended spectrum beta-lactamaseSubName: Full=Extended spectrum beta-lactamase; pSC138 CDS69966 1230 + 0.531707
aph SCH_026 aminoglycoside 3'-phosphotransferaseSubName: Full=Aminoglycoside 3-phosphotransferase; pSC138 CDS21137 816 - 0.438726
ard SCH_114 anti-restriction proteinSubName: Full=Anti-restriction protein; pSC138 CDS86705 891 - 0.59596
blc SCH_091 outer membrane lipoprotein BLC precursorSubName: Full=Outer membrane lipoprotein BLC; pSC138 CDS71289 534 + 0.522472
blc SCH_156 putative lipoproteinSubName: Full=Putative lipoprotein; pSC138 CDS119181 345 - 0.582609
cat2 SCH_011 chloramphenicol acetyl transferase IIRecName: Full=Chloramphenicol acetyltransferase; EC=2.3.1.28; pSC138 CDS10014 642 - 0.429907
ccgA2 SCH_109 CcgAII proteinSubName: Full=CcgAII protein; pSC138 CDS84616 465 - 0.453763
cmlA SCH_052 chloramphenicol resistance proteinSubName: Full=Chloramphenicol resistance protein; pSC138 CDS40607 1260 - 0.553175
ebr SCH_033 ORF3-QacEdelta1 fusion proteinSubName: Full=ORF3-QacEdelta1 fusion protein; pSC138 CDS26438 348 + 0.5
exeAB SCH_080 surface exclusion proteinSubName: Full=Surface exclusion protein; pSC138 CDS64969 663 + 0.38914
finQ SCH_088 pSC138 pseudo67937 5178 + 0.430282
gp43 SCH_115 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS87667 597 - 0.554439
impA SCH_138 ImpARecName: Full=Protein ImpA; EC=3.4.21.-; Contains: RecName: Full=Protein ImpA; pSC138 CDS100863 438 + 0.557078
impC SCH_137 ImpCSubName: Full=ImpC; pSC138 CDS100618 249 + 0.514056
insA SCH_062 transposition proteinSubName: Full=Insertion element IS1 1/2/3/5/6 protein insA; SubName: Full=Transposition protein; pSC138 CDS49264 276 + 0.536232
insB SCH_177 IS1 protein InsBSubName: Full=IS1 protein InsB; pSC138 CDS137167 378 + 0.560847
insB SCH_063 transposition proteinSubName: Full=Transposition protein; pSC138 CDS49458 504 + 0.551587
int2 SCH_176 integrase/recombinaseSubName: Full=Integrase/recombinase; pSC138 CDS136006 978 - 0.637014
int2 SCH_056 integraseSubName: Full=Integrase; pSC138 CDS44690 1014 + 0.61144
int2 SCH_029 IntSubName: Full=Int; pSC138 CDS23420 1014 - 0.610454
istB SCH_168 putative ATP-binding proteinSubName: Full=Putative ATP-binding protein; pSC138 CDS126643 780 - 0.558974
klcA SCH_126 probable antirestriction protein KlcASubName: Full=Probable antirestriction protein KlcA; pSC138 CDS93724 426 - 0.546948
mboIB SCH_130 putative site-specific DNA methyl transferaseSubName: Full=Putative site-specific DNA methyl transferase; pSC138 CDS96052 684 - 0.561404
mefE SCH_045 macrolide-efflux determinantSubName: Full=Macrolide-efflux determinant; pSC138 CDS35250 240 + 0.45
merA SCH_020 mercuric reductaseSubName: Full=Mercuric reductase; pSC138 CDS15842 1695 + 0.651917
merD SCH_021 MerDSubName: Full=MerD; pSC138 CDS17554 363 + 0.69697
merE SCH_022 MerESubName: Full=MerE; pSC138 CDS17913 237 + 0.691983
mlrA SCH_157 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; pSC138 CDS119643 726 + 0.612948
mobC SCH_101 MobC-like proteinSubName: Full=MobC-like protein; pSC138 CDS81316 276 + 0.449275
mpi SCH_175 putative mannose-6-phosphate isomeraseSubName: Full=Putative mannose-6-phosphate isomerase; pSC138 CDS135590 369 + 0.506775
nikA SCH_100 relaxosome componentSubName: Full=Relaxosome component; pSC138 CDS80750 333 - 0.426426
nikB SCH_099 NikB-like proteinSubName: Full=NikB-like protein; pSC138 CDS78040 2700 - 0.522963
paa4 SCH_060 resolvaseSubName: Full=Resolvase; pSC138 CDS47877 738 + 0.673442
parA SCH_133 pSC138 pseudo97551 980 - 0.464286
parB SCH_132 ParBSubName: Full=ParB; pSC138 CDS97126 423 - 0.446809
pecM SCH_003 hypothetical transmembrane proteinSubName: Full=Hypothetical transmembrane protein; pSC138 CDS1598 885 + 0.589831
pnd SCH_086 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS67692 93 + 0.462366
pndA SCH_084 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS67141 252 + 0.5
psiA SCH_116 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS88260 720 - 0.563889
psiB SCH_117 plasmid SOS inhibition proteinSubName: Full=Plasmid SOS inhibition protein; pSC138 CDS88976 438 - 0.545662
qacF SCH_050 quaternary ammonium compound resistance proteinSubName: Full=Quaternary ammonium compound resistance protein; pSC138 CDS39221 333 - 0.516517
recF SCH_160 putative RecF proteinSubName: Full=Putative RecF protein; pSC138 CDS122086 1089 + 0.573003
relB SCH_165 translation negative regulatorSubName: Full=Translation negative regulator; pSC138 CDS125813 240 + 0.479167
relE SCH_166 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS126052 288 + 0.46875
repA SCH_154 DNA replication proteinSubName: Full=DNA replication protein; pSC138 CDS117380 1011 + 0.492582
samB SCH_139 pSC138 pseudo101300 11437 + 0.402728
sat SCH_055 streptothricin acetyl-transferaseSubName: Full=Streptothricin acetyl-transferase; pSC138 CDS43681 1080 - 0.492593
sogS SCH_073 DNA primaseSubName: Full=DNA primase; pSC138 CDS57308 285 - 0.54386
sopB SCH_153 SopBSubName: Full=SopB; pSC138 CDS114503 972 - 0.501029
ssb SCH_120 single-stranded DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; pSC138 CDS91771 528 - 0.592803
stra SCH_065 StrASubName: Full=StrA; pSC138 CDS51043 894 + 0.541387
sugE SCH_092 SugE proteinRecName: Full=Quaternary ammonium compound-resistance protein SugE; pSC138 CDS71819 441 - 0.512472
sulI SCH_034 dihydropteroate synthetase typeISubName: Full=Dihydropteroate synthetase typeI; pSC138 CDS26779 840 + 0.616667
sulI3' SCH_035 SulI3'SubName: Full=SulI3; pSC138 CDS27746 501 + 0.650699
sulII SCH_048 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; pSC138 CDS37250 792 + 0.377525
tem-1 SCH_018 beta-lactamaseSubName: Full=Beta-lactamase; pSC138 CDS14817 810 + 0.495062
tem67 SCH_043 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS34275 201 + 0.562189
tetA SCH_004 tetracycline efflux proteinSubName: Full=Tetracycline efflux protein; pSC138 CDS2514 1200 - 0.636667
tetR SCH_005 RK2 tetracycline repressor proteinSubName: Full=RK2 tetracycline repressor protein; pSC138 CDS3792 678 + 0.626844
tniAdelta1 SCH_024 TniAdelta1SubName: Full=TniAdelta1; pSC138 CDS18892 1305 + 0.645211
tniBdelta1 SCH_036 NTP-binding proteinSubName: Full=NTP-binding protein; pSC138 CDS28215 993 - 0.64854
tnpA SCH_013 transposaseSubName: Full=Transposase; pSC138 CDS11484 606 + 0.533003
tnpA SCH_169 putative transposaseSubName: Full=Putative transposase; pSC138 CDS127422 1023 - 0.553275
tnpA SCH_016 transposaseSubName: Full=Transposase; pSC138 CDS13480 606 - 0.533003
tnpA SCH_089 transposaseSubName: Full=Transposase; pSC138 CDS68464 1263 + 0.339667
tnpA SCH_038 TnpASubName: Full=TnpA; pSC138 CDS29367 723 + 0.532503
tnpA SCH_044 transposaseSubName: Full=Transposase; pSC138 CDS34469 723 + 0.526971
tnpA SCH_049 transposaseSubName: Full=Transposase; pSC138 CDS38288 687 + 0.518195
tnpA SCH_161 TnpASubName: Full=TnpA; pSC138 CDS123237 723 - 0.53112
tnpA SCH_006 relaxase/helicaseSubName: Full=Relaxase/helicase; pSC138 CDS4501 243 - 0.72428
tnpA SCH_066 TnpASubName: Full=TnpA; pSC138 CDS51955 723 + 0.532503
tnpA SCH_178 transposaseSubName: Full=Transposase; pSC138 CDS138055 675 - 0.660741
tnpA SCH_037 putative transposaseSubName: Full=Putative transposase; pSC138 CDS29220 693 - 0.548341
tnpA SCH_008 transposaseSubName: Full=Transposase; pSC138 CDS5814 2973 - 0.60444
tnpA SCH_007 transposaseSubName: Full=Transposase; pSC138 CDS4801 675 - 0.660741
tnpA SCH_027 TnpASubName: Full=TnpA; pSC138 CDS22085 738 + 0.528455
tnpA SCH_010 putative transposaseSubName: Full=Putative transposase; pSC138 CDS9000 393 - 0.547074
tnpA SCH_058 TnpASubName: Full=TnpA; pSC138 CDS46523 723 + 0.532503
tnpA SCH_172 TnpASubName: Full=TnpA; pSC138 CDS134082 213 - 0.488263
tnpA SCH_014 transposaseSubName: Full=Transposase; pSC138 CDS12035 918 - 0.625272
tnpA SCH_074 transposaseSubName: Full=Transposase; pSC138 CDS57632 606 - 0.526403
tnpA SCH_174 hypothetical protein ASubName: Full=Uncharacterized protein; pSC138 CDS135314 264 - 0.534091
tnpA SCH_025 TnpASubName: Full=TnpA; pSC138 CDS20225 723 + 0.532503
tnpA SCH_173 hypothetical protein BSubName: Full=Uncharacterized protein; pSC138 CDS134457 834 - 0.535971
tnpM SCH_057 TnpMSubName: Full=TnpM; pSC138 CDS45648 609 + 0.633826
tnpR SCH_015 resolvaseSubName: Full=Resolvase; pSC138 CDS12955 486 - 0.578189
tnpR SCH_028 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS22815 387 + 0.547804
tnpR SCH_009 resolvase family recombinaseSubName: Full=Resolvase family recombinase; pSC138 CDS8789 300 - 0.59
tnpR SCH_017 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS13657 978 + 0.537832
traL SCH_072 TraL-like proteinSubName: Full=TraL-like protein; pSC138 CDS56943 348 - 0.528736
traM SCH_071 TraM-like proteinSubName: Full=TraM-like protein; pSC138 CDS56254 693 - 0.50938
traN SCH_070 TraN-like proteinSubName: Full=TraN-like protein; pSC138 CDS55260 984 - 0.541667
traO SCH_069 TraO-like proteinSubName: Full=TraO-like protein; pSC138 CDS53968 1290 - 0.512403
traP SCH_068 TraP-like proteinSubName: Full=TraP-like protein; pSC138 CDS53264 705 - 0.50922
traQ SCH_067 TraQ-like proteinSubName: Full=TraQ-like protein; pSC138 CDS52737 528 - 0.522727
traU SCH_075 TraU-like proteinSubName: Full=TraU-like protein; pSC138 CDS58327 1911 + 0.503401
traV SCH_076 TraV-like proteinSubName: Full=TraV-like protein; pSC138 CDS60237 615 + 0.517073
traW SCH_077 lipoproteinSubName: Full=Lipoprotein; pSC138 CDS60818 1203 + 0.528678
traX SCH_078 TraX-like proteinSubName: Full=TraX-like protein; pSC138 CDS62049 585 + 0.483761
traY SCH_079 integral membrane proteinSubName: Full=Integral membrane protein; pSC138 CDS62661 2238 + 0.466935
trbA SCH_095 TrbA-like proteinSubName: Full=TrbA-like protein; pSC138 CDS73421 1209 + 0.508685
trbB SCH_096 TrbBSubName: Full=TrbB; pSC138 CDS74648 1071 + 0.514472
trbC SCH_097 TrbC-like proteinSubName: Full=TrbC-like protein; pSC138 CDS75711 2292 + 0.501309
tri SCH_030 dihydrofolate reductaseRecName: Full=Dihydrofolate reductase; EC=1.5.1.3; pSC138 CDS24578 498 + 0.512048
urf2 SCH_023 Urf2SubName: Full=Urf2; pSC138 CDS17969 885 + 0.650847
ybgA SCH_159 putative pathogenicity island proteinSubName: Full=Putative pathogenicity island protein; pSC138 CDS120981 960 + 0.586458
ycfA SCH_127 YcfASubName: Full=YcfA; pSC138 CDS94567 771 - 0.613489
ycgB SCH_123 YcjBSubName: Full=YcjB; pSC138 CDS93009 195 - 0.589744
ycgC SCH_125 YcgCSubName: Full=YcgC; pSC138 CDS93255 423 - 0.562648
ychA SCH_122 YchASubName: Full=YchA; pSC138 CDS92682 315 - 0.673016
ydfA SCH_111 YdfASubName: Full=YdfA; pSC138 CDS85542 435 - 0.57931
ydfB SCH_110 YdfBSubName: Full=YdfB; pSC138 CDS85182 267 - 0.565543
ydgA SCH_108 putative YhgA-like transposaseSubName: Full=Putative YhgA-like transposase; pSC138 CDS83717 903 - 0.533776
ydiA SCH_102 YdiASubName: Full=YdiA; pSC138 CDS81739 852 - 0.507042
yedX SCH_158 putative exported proteinSubName: Full=Putative exported protein; pSC138 CDS120468 411 + 0.545012
ygeA SCH_106 YgeASubName: Full=YgeA; pSC138 CDS83167 252 + 0.563492
ykfF SCH_119 YkfFRecName: Full=UPF0401 protein YubL; pSC138 CDS91480 234 - 0.525641
yqkA SCH_047 hypothetical proteinSubName: Full=Uncharacterized protein; pSC138 CDS36536 246 + 0.386179
yusZ SCH_046 putative oxidoreductaseSubName: Full=Putative oxidoreductase; pSC138 CDS35635 864 + 0.439815