Gene list
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Organism: Escherichia coli, A2363
Number of genes found: 171
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| Escherichia coli, A2363 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | O2R_12 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 5571 | 243 | - | 0.625514 |
| NA | O2R_76 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 53757 | 435 | - | 0.577011 |
| NA | pAPEC-O2-R | misc_feature | 42988 | 237 | + | 0.49789 | |||
| NA | pAPEC-O2-R | repeat_region | 87156 | 2303 | - | 0.619627 | |||
| NA | O2R_52 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 41650 | 273 | + | 0.505495 |
| NA | O2R_74 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 52654 | 171 | + | 0.654971 |
| NA | O2R_118 | conserved hypothetical protein | SubName: Full=ORF5; SubName: Full=Orf5; SubName: Full=Protein YbaA; SubName: Full=Putative acetyl transferase; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 93198 | 501 | + | 0.650699 |
| NA | O2R_54 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 42144 | 213 | - | 0.671362 |
| NA | pAPEC-O2-R | misc_feature | 16790 | 531 | - | 0.376648 | |||
| NA | O2R_68 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 48760 | 1362 | - | 0.567548 |
| NA | O2R_121 | TniBdelta1 | SubName: Full=TniBdelta1; | pAPEC-O2-R | CDS | 96271 | 198 | - | 0.606061 |
| NA | pAPEC-O2-R | repeat_region | 96461 | 4768 | + | 0.502936 | |||
| NA | O2R_94 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 66784 | 402 | - | 0.400498 |
| NA | O2R_90 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 63035 | 405 | - | 0.459259 |
| NA | O2R_65 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 47701 | 234 | + | 0.713675 |
| NA | O2R_53 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 41902 | 207 | - | 0.560386 |
| NA | O2R_110 | resolvase | SubName: Full=Resolvase; SubName: Full=TnpR; SubName: Full=Transposon Tn21 resolvase; | pAPEC-O2-R | CDS | 87156 | 561 | - | 0.655971 |
| NA | pAPEC-O2-R | misc_feature | 91893 | 345 | - | 0.501449 | |||
| NA | O2R_50 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 39758 | 594 | + | 0.446128 |
| NA | O2R_55 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 42279 | 234 | + | 0.709402 |
| NA | O2R_108 | relaxase | SubName: Full=Putative relaxase/helicase; SubName: Full=Relaxase; SubName: Full=TnpA; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 83886 | 243 | - | 0.720165 |
| NA | O2R_79 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 55186 | 345 | - | 0.628986 |
| NA | O2R_34 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 31319 | 363 | - | 0.38292 |
| NA | O2R_63 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 47324 | 207 | - | 0.560386 |
| NA | O2R_14 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; SubName: Full=YieA; | pAPEC-O2-R | CDS | 6621 | 861 | - | 0.440186 |
| NA | O2R_23 | conserved hypothetical protein | SubName: Full=Conjugal transfer protein TrbB; SubName: Full=IncF plasmid conjugative transfer protein TrbB; SubName: Full=TrbB; SubName: Full=Uncharacterized protein; SubName: Full=W0087; | pAPEC-O2-R | CDS | 21792 | 546 | - | 0.582418 |
| NA | O2R_109 | Tn1721 transposase | SubName: Full=Tn1721 transposase; SubName: Full=TnpA; SubName: Full=Transposase; | pAPEC-O2-R | CDS | 84186 | 2967 | - | 0.658915 |
| NA | O2R_70 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 50667 | 423 | + | 0.612293 |
| NA | O2R_78 | DNA methylase | SubName: Full=DNA methylase; | pAPEC-O2-R | CDS | 54427 | 684 | - | 0.577485 |
| NA | pAPEC-O2-R | RBS | 73469 | 7 | + | 0.571429 | |||
| NA | O2R_27 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 23826 | 258 | - | 0.387597 |
| NA | O2R_9 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; SubName: Full=YihA; | pAPEC-O2-R | CDS | 4028 | 591 | - | 0.497462 |
| NA | O2R_51 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; SubName: Full=YubP; | pAPEC-O2-R | CDS | 40648 | 822 | - | 0.442822 |
| NA | O2R_104.2 | transposase | SubName: Full=IS15 transposase; SubName: Full=IS26 transposase; SubName: Full=IS26-TnpA protein; SubName: Full=Putative transposase; SubName: Full=TnpA; SubName: Full=Transposase; SubName: Full=Transposase of IS15delta/26; | pAPEC-O2-R | CDS | 80762 | 705 | + | 0.52766 |
| NA | pAPEC-O2-R | repeat_region | 84186 | 9513 | + | 0.601282 | |||
| NA | O2R_122 | transposase | SubName: Full=TnpA; SubName: Full=Transposase; | pAPEC-O2-R | CDS | 96461 | 3006 | - | 0.516633 |
| NA | O2R_27 | pAPEC-O2-R | RBS | 23839 | 7 | - | 0.285714 | ||
| NA | O2R_76 | pAPEC-O2-R | RBS | 54201 | 6 | - | 0.5 | ||
| NA | O2R_123 | Resolvase | SubName: Full=Repressor; SubName: Full=Resolvase; SubName: Full=TnpR; SubName: Full=TnpR of Tn3; SubName: Full=TnpR resolvase; | pAPEC-O2-R | CDS | 99628 | 558 | + | 0.532258 |
| NA | pAPEC-O2-R | misc_feature | 1646 | 450 | - | 0.531111 | |||
| NA | O2R_35 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 31709 | 216 | - | 0.444444 |
| NA | O2R_80 | YfdA | SubName: Full=YfdA; | pAPEC-O2-R | CDS | 55494 | 438 | - | 0.541096 |
| NA | O2R_105 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 81472 | 396 | + | 0.563131 |
| NA | O2R_60 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 44441 | 1959 | - | 0.588566 |
| NA | O2R_72 | conserved hypothetical protein | SubName: Full=Escherichia coli 1540 plasmid pIP1206 complete genome; SubName: Full=Uncharacterized protein; SubName: Full=YcjA; | pAPEC-O2-R | CDS | 51629 | 423 | - | 0.560284 |
| NA | O2R_77 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 54205 | 222 | - | 0.540541 |
| NA | O2R_71 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 51441 | 192 | - | 0.505208 |
| NA | O2R_36 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 32004 | 474 | - | 0.464135 |
| NA | O2R_67 | conserved hypothetical protein | SubName: Full=Adenine-specific DNA methylase; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 48149 | 564 | - | 0.590426 |
| NA | O2R_102 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 76714 | 441 | + | 0.485261 |
| NA | O2R_92 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 63876 | 975 | - | 0.588718 |
| NA | O2R_69 | conserved hypothetical protein | SubName: Full=Escherichia coli 1540 plasmid pIP1206 complete genome; SubName: Full=Putative plasmid protein ECsL50; SubName: Full=Uncharacterized protein; SubName: Full=YdaB; SubName: Full=YdeB; | pAPEC-O2-R | CDS | 50173 | 231 | - | 0.580087 |
| NA | O2R_64 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 47566 | 213 | - | 0.671362 |
| NA | O2R_99 | conserved hypothetical protein | SubName: Full=Copper ABC transporter substrate-binding protein; SubName: Full=Cu(I)/Ag(I) efflux system periplasmic protein CusF; SubName: Full=CusF; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 71711 | 354 | + | 0.437853 |
| NA | O2R_87 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 61006 | 276 | + | 0.456522 |
| NA | O2R_104 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 80001 | 711 | - | 0.462729 |
| NA | O2R_66 | hypothetical protein | SubName: Full=Escherichia coli 1540 plasmid pIP1206 complete genome; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 47985 | 165 | - | 0.612121 |
| NA | pAPEC-O2-R | RBS | 69442 | 5 | + | 0.8 | |||
| NA | O2R_89 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 62269 | 609 | - | 0.490969 |
| NA | O2R_91 | hypothetical protein | SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 63464 | 153 | + | 0.477124 |
| IS1326 | pAPEC-O2-R | repeat_region | 93807 | 2470 | - | 0.521457 | |||
| IS26 | pAPEC-O2-R | repeat_region | 80699 | 820 | + | 0.520732 | |||
| aadA4 | O2R_115 | aminoglycoside-3'-adenyltransferase | SubName: Full=AadA4 protein; SubName: Full=AadA5; SubName: Full=AadA5 aminoglycoside (3) adenylyltransferase confers resistance to streptomycin and spectinomycin; SubName: Full=AadA5 aminoglycoside (3)(9) adenylyltransferase confers resistance to streptomycin and spectinomycin; SubName: Full=Adenylyltransferase; SubName: Full=Aminoglycoside 3-adenylyltransferase A5; SubName: Full=Aminoglycoside adenylyltransferase AadA5; SubName: Full=Aminoglycoside-3-adenyltransferase; SubName: Full=Aminoglycoside-3-adenyltransferase; SubName: Full=Streptomycin and spectinomycin resistance aminoglycoside adenyltransferase; | pAPEC-O2-R | CDS | 90896 | 789 | + | 0.583016 |
| aadA4 | O2R_115 | pAPEC-O2-R | RBS | 91696 | 5 | + | 0.2 | ||
| bla | O2R_124 | beta-lactamase | SubName: Full=Beta-lactamase; SubName: Full=Beta-lactamase TEM1D; SubName: Full=Beta-lactamase TEM1F; SubName: Full=Beta-lactamase variant TEM-1D; SubName: Full=BlaTEM; SubName: Full=BlaTEM-1 protein; SubName: Full=Class A beta lactamase TEM-1; SubName: Full=TEM extended-spectrum beta-lactamase; SubName: Full=TEM-1; SubName: Full=TEM-1 beta-lactamase; | pAPEC-O2-R | CDS | 100368 | 861 | + | 0.493612 |
| catB3 | O2R_114 | chloramphenicol acetyltransferase | SubName: Full=Chloramphenicol acetyltransferase; | pAPEC-O2-R | CDS | 90206 | 633 | + | 0.494471 |
| catB3 | O2R_114 | pAPEC-O2-R | RBS | 90196 | 4 | + | 0.75 | ||
| class I integron | pAPEC-O2-R | repeat_region | 88445 | 1014 | - | 0.612426 | |||
| finO | O2R_13 | pAPEC-O2-R | RBS | 6524 | 4 | - | 0.75 | ||
| finO | O2R_13 | fertility inhibition protein | SubName: Full=Fertility inhibition protein; SubName: Full=FinO; SubName: Full=IncF plasmid conjugative transfer fertility inhibition protein FinO; SubName: Full=RNA-binding protein; | pAPEC-O2-R | CDS | 5958 | 561 | - | 0.54902 |
| folA | O2R_113 | dihydrofolate reductase type I | SubName: Full=Dehydrofolate reductase; SubName: Full=DfrA1; SubName: Full=DfrA1 dihydrofolate reductase; SubName: Full=Dihrdrofolate reductase; SubName: Full=Dihydrofolate reductase; SubName: Full=Dihydrofolate reductase DHFRI; SubName: Full=Dihydrofolate reductase DHFRXII; SubName: Full=Dihydrofolate reductase type 1; EC=1.5.1.3; SubName: Full=Dihydrofolate reductase type I; SubName: Full=Dihydrofolate reductase type I(Trimethoprim resistance protein); | pAPEC-O2-R | CDS | 89615 | 474 | + | 0.396624 |
| folA | O2R_113 | pAPEC-O2-R | RBS | 89604 | 6 | + | 0.5 | ||
| hha | O2R_10 | Hha protein | SubName: Full=Haemolysin expression modulating protein; SubName: Full=Hemolysin expression modulating protein; SubName: Full=Hha; SubName: Full=Hha protein; SubName: Full=Modulating protein; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 4656 | 210 | - | 0.366667 |
| hnh | O2R_93 | Hnh endonuclease | SubName: Full=Hnh endonuclease; | pAPEC-O2-R | CDS | 65488 | 909 | + | 0.359736 |
| hok | O2R_56 | post-segregation killing protein | SubName: Full=F leading maintenance; SubName: Full=Hok; SubName: Full=Hok protein; SubName: Full=Killer protein; SubName: Full=Modulator of post-segregation killing protein; SubName: Full=Post-segregation killing protein; SubName: Full=Small toxic polypeptide,Hok; | pAPEC-O2-R | CDS | 42798 | 159 | - | 0.477987 |
| hok | O2R_56 | pAPEC-O2-R | RBS | 42965 | 6 | - | 0.5 | ||
| impA | O2R_83 | ImpA UV protection protein | SubName: Full=Error-prone repair protein UmuD; SubName: Full=Error-prone repair protein, UV protection protein UmuD; SubName: Full=ImpA; SubName: Full=ImpA UV protection protein; SubName: Full=Protein impA; SubName: Full=UV protection and mutation protein; SubName: Full=UV protection protein; SubName: Full=UV protection protein UmuD; SubName: Full=UmuD; | pAPEC-O2-R | CDS | 57058 | 438 | + | 0.554795 |
| impB | O2R_125 | ImpB UV protection protein | SubName: Full=ImpB UV protection protein; | pAPEC-O2-R | CDS | 57495 | 1272 | + | 0.513365 |
| impC | O2R_82 | pAPEC-O2-R | RBS | 56800 | 6 | + | 0.666667 | ||
| impC | O2R_82 | ImpC | SubName: Full=DNA damage-inducible protein, DinI-like family protein; SubName: Full=DinI-like family protein; SubName: Full=ImpC; SubName: Full=Protein impC; SubName: Full=UV protection and mutation protein; SubName: Full=UV protection protein; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 56813 | 249 | + | 0.514056 |
| intI1 | O2R_112 | integrase | SubName: Full=Class 1 integron integrase IntI1; SubName: Full=IntI1; SubName: Full=IntI1 DNA integrase; SubName: Full=IntI1 protein; SubName: Full=Integrase; SubName: Full=Integrase IntI1; SubName: Full=Integrase/recombinase; SubName: Full=Integron integrase IntIPac; SubName: Full=Integron integrase family protein; SubName: Full=Tn21 integrase; | pAPEC-O2-R | CDS | 88445 | 1014 | - | 0.612426 |
| istA | O2R_120 | IstA | SubName: Full=Integrase core domain protein; SubName: Full=IstA; | pAPEC-O2-R | CDS | 94646 | 1515 | - | 0.541914 |
| istA | O2R_120 | pAPEC-O2-R | RBS | 96168 | 7 | - | 0.428571 | ||
| istB | O2R_119 | IstB | SubName: Full=IstB; | pAPEC-O2-R | CDS | 93874 | 783 | - | 0.501916 |
| istB | O2R_119 | pAPEC-O2-R | RBS | 94664 | 7 | - | 0.428571 | ||
| parA | O2R_86 | putative plasmid partitioning protein | SubName: Full=Plasmid partitioning protein ParA; SubName: Full=Putative plasmid partitioning protein; | pAPEC-O2-R | CDS | 60368 | 645 | + | 0.415504 |
| parA | O2R_86 | pAPEC-O2-R | RBS | 60359 | 4 | + | 0.75 | ||
| psiA | O2R_58 | PsiA | SubName: Full=PsiA; | pAPEC-O2-R | CDS | 43236 | 720 | - | 0.602778 |
| psiB | O2R_59 | PsiB | SubName: Full=PsiB; | pAPEC-O2-R | CDS | 43952 | 435 | - | 0.572414 |
| psiB | O2R_59 | pAPEC-O2-R | RBS | 44395 | 7 | - | 0.571429 | ||
| repA1 | O2R_8 | RepA1 | SubName: Full=RepA1; | pAPEC-O2-R | CDS | 2371 | 870 | - | 0.577011 |
| resD | O2R_88 | pAPEC-O2-R | RBS | 62210 | 4 | - | 0.5 | ||
| resD | O2R_88 | resolvase | SubName: Full=Resolvase; | pAPEC-O2-R | CDS | 61419 | 783 | - | 0.581098 |
| silA | O2R_101 | heavy metal efflux pump | SubName: Full=CusA; SubName: Full=Heavy metal efflux pump; | pAPEC-O2-R | CDS | 73481 | 3147 | + | 0.523356 |
| silB | O2R_100 | pAPEC-O2-R | RBS | 72168 | 6 | + | 0.333333 | ||
| silB | O2R_100 | efflux transporter, RND family, MFP subunit | SubName: Full=CusB; SubName: Full=Efflux transporter, RND family, MFP subunit; | pAPEC-O2-R | CDS | 72178 | 1293 | + | 0.480278 |
| silC | O2R_98 | outer membrane efflux protein | SubName: Full=Outer membrane efflux protein; | pAPEC-O2-R | CDS | 70298 | 1386 | + | 0.505772 |
| silE | O2R_95 | silver-binding protein | SubName: Full=Silver-binding protein; | pAPEC-O2-R | CDS | 67278 | 495 | - | 0.515152 |
| silP | O2R_103 | copper-translocating P-type ATPase | SubName: Full=Copper-translocating P-type ATPase; SubName: Full=SilP; | pAPEC-O2-R | CDS | 77252 | 2478 | + | 0.537934 |
| silP | O2R_103 | pAPEC-O2-R | RBS | 77268 | 8 | + | 0.375 | ||
| silR | O2R_97 | SilR | SubName: Full=CusR; SubName: Full=SilR; | pAPEC-O2-R | CDS | 69428 | 681 | - | 0.515419 |
| silS | O2R_96 | SilS | SubName: Full=CusS; SubName: Full=SilS; | pAPEC-O2-R | CDS | 67960 | 1476 | - | 0.493902 |
| ssb | O2R_62 | pAPEC-O2-R | RBS | 47305 | 8 | - | 0.5 | ||
| ssb | O2R_62 | single-stranded DNA binding protein | RecName: Full=Single-stranded DNA-binding protein; | pAPEC-O2-R | CDS | 46759 | 540 | - | 0.588889 |
| stbA | O2R_85 | pAPEC-O2-R | RBS | 60146 | 6 | - | 0.666667 | ||
| stbA | O2R_85 | stable plasmid inheritance protein A | SubName: Full=Stable plasmid inheritance protein A; | pAPEC-O2-R | CDS | 59168 | 972 | - | 0.425926 |
| stbB | O2R_84 | pAPEC-O2-R | RBS | 59171 | 9 | - | 0.444444 | ||
| stbB | O2R_84 | stable plasmid inheritance protein B | SubName: Full=Plasmid stability protein; SubName: Full=Stable plasmid inheritance protein B; | pAPEC-O2-R | CDS | 58771 | 393 | - | 0.463104 |
| sulI | O2R_117 | pAPEC-O2-R | RBS | 92218 | 5 | + | 0.8 | ||
| sulI | O2R_117 | dihydropteroate synthase | RecName: Full=Dihydropteroate synthase type-1; EC=2.5.1.15; AltName: Full=Dihydropteroate pyrophosphorylase type I; AltName: Full=Dihydropteroate synthase type I; Short=DHPS; | pAPEC-O2-R | CDS | 92231 | 840 | + | 0.616667 |
| tetA | O2R_106 | tetracycline efflux protein | SubName: Full=MFS transporter; SubName: Full=Multidrug resistance family protein; SubName: Full=TetA; SubName: Full=Tetracycline efflux protein; | pAPEC-O2-R | CDS | 81899 | 1200 | - | 0.636667 |
| tetR | O2R_107 | tetracycline repressor protein | SubName: Full=TetR; SubName: Full=Tetracycline repressor protein; SubName: Full=Tetracycline repressor protein TetR; SubName: Full=Tetracycline repressor protein class A from transposon 1721; SubName: Full=Tetracycline resistance repressor protein TetR; | pAPEC-O2-R | CDS | 83177 | 678 | + | 0.626844 |
| tnpM | O2R_111 | tnpM | SubName: Full=TnpM; SubName: Full=Transposase M; SubName: Full=Transposition modulator TnpM; SubName: Full=Uncharacterized protein; | pAPEC-O2-R | CDS | 87892 | 585 | - | 0.630769 |
| tnpM | O2R_111 | pAPEC-O2-R | RBS | 88492 | 4 | - | 0.75 | ||
| traA | O2R_46 | pAPEC-O2-R | RBS | 37818 | 6 | - | 0.5 | ||
| traA | O2R_46 | TraA fimbrial protein precursor (pilin) | SubName: Full=TraA; SubName: Full=TraA fimbrial protein (Pilin); SubName: Full=TraA protein; | pAPEC-O2-R | CDS | 37453 | 360 | - | 0.505556 |
| traB | O2R_42 | TraB pilus assembly protein | SubName: Full=F pilus assembly protein TraB; SubName: Full=IncF plasmid conjugative transfer pilus assembly protein TraB; SubName: Full=Pilus assembly protein; SubName: Full=TraB; SubName: Full=TraB pilus assembly protein; SubName: Full=TraB protein; | pAPEC-O2-R | CDS | 34397 | 1428 | - | 0.572129 |
| traC | O2R_33 | TraC | SubName: Full=TraC; | pAPEC-O2-R | CDS | 28563 | 2631 | - | 0.54504 |
| traD | O2R_17 | TraD | SubName: Full=TraD; | pAPEC-O2-R | CDS | 13576 | 2151 | - | 0.528126 |
| traD | O2R_17 | pAPEC-O2-R | RBS | 15743 | 4 | - | 0.75 | ||
| traE | O2R_44 | pAPEC-O2-R | RBS | 37113 | 4 | - | 0.5 | ||
| traE | O2R_44 | TraE | SubName: Full=TraE; | pAPEC-O2-R | CDS | 36539 | 567 | - | 0.467372 |
| traF | O2R_26 | TraF | SubName: Full=TraF; | pAPEC-O2-R | CDS | 23090 | 744 | - | 0.509409 |
| traG | O2R_20 | TraG | SubName: Full=TraG; | pAPEC-O2-R | CDS | 17308 | 2823 | - | 0.519306 |
| traH | O2R_21 | TraH pilus assembly protein | SubName: Full=IncF plasmid conjugative transfer pilus assembly protein TraH; SubName: Full=TraH; SubName: Full=TraH pilus assembly protein; SubName: Full=TraH protein; | pAPEC-O2-R | CDS | 20127 | 1377 | - | 0.519245 |
| traH | O2R_21 | pAPEC-O2-R | RBS | 20138 | 7 | - | 0.714286 | ||
| traI | O2R_16 | TraI | SubName: Full=TraI; | pAPEC-O2-R | CDS | 8306 | 5271 | - | 0.600266 |
| traJ | O2R_48 | pAPEC-O2-R | RBS | 38858 | 6 | - | 0.666667 | ||
| traJ | O2R_48 | TraJ | SubName: Full=TraJ; | pAPEC-O2-R | CDS | 38167 | 687 | - | 0.353712 |
| traK | O2R_43 | pAPEC-O2-R | RBS | 35834 | 5 | - | 0.8 | ||
| traK | O2R_43 | TraK lipoprotein precursor | SubName: Full=Conjugal transfer protein TraK; SubName: Full=F pilus assembly protein TraK; SubName: Full=IncF plasmid conjugative transfer pilus assembly protein TraK; SubName: Full=Pilus assembly protein; SubName: Full=TraK; SubName: Full=TraK lipoprotein; SubName: Full=Type IV secretion-like conjugative transfer system secretin TraK; SubName: Full=Type-F conjugative transfer system secretin TraK; | pAPEC-O2-R | CDS | 35824 | 729 | - | 0.570645 |
| traL | O2R_45 | pAPEC-O2-R | RBS | 37446 | 6 | - | 0.333333 | ||
| traL | O2R_45 | TraL | SubName: Full=Conjugal transfer protein TraL; SubName: Full=Conjugative transfer pilus assembly protein; SubName: Full=F pilus assembly protein TraL; SubName: Full=IncF plasmid conjugative transfer pilus assembly protein TraL; SubName: Full=Pilus assembly protein; SubName: Full=Protein traL; SubName: Full=TraL; SubName: Full=TraL protein; SubName: Full=Type IV secretion-like conjugative transfer system protein TraL; SubName: Full=W0072; | pAPEC-O2-R | CDS | 37127 | 312 | - | 0.471154 |
| traM | O2R_49 | TraM | SubName: Full=TraM; | pAPEC-O2-R | CDS | 39044 | 384 | - | 0.398438 |
| traN | O2R_28 | TraN | SubName: Full=TraN; | pAPEC-O2-R | CDS | 24110 | 1809 | - | 0.523494 |
| traP | O2R_41 | TraP | SubName: Full=TraP; | pAPEC-O2-R | CDS | 33835 | 573 | - | 0.506108 |
| traP | O2R_41 | pAPEC-O2-R | RBS | 34415 | 8 | - | 0.75 | ||
| traQ | O2R_24 | TraQ | SubName: Full=Conjugal transfer protein TraQ; SubName: Full=TraQ; | pAPEC-O2-R | CDS | 22324 | 285 | - | 0.526316 |
| traR | O2R_37 | TraR | SubName: Full=TraR; | pAPEC-O2-R | CDS | 32470 | 213 | - | 0.469484 |
| traR | O2R_37 | pAPEC-O2-R | RBS | 32693 | 4 | - | |||
| traT | O2R_18 | TraT enterobacterial complement resistance protein | SubName: Full=TraT enterobacterial complement resistance protein; | pAPEC-O2-R | CDS | 16027 | 777 | - | 0.492922 |
| traU | O2R_30 | TraU | SubName: Full=TraU; | pAPEC-O2-R | CDS | 26562 | 993 | - | 0.554884 |
| traV | O2R_38 | TraV | SubName: Full=Pilus assembly lipoprotein; SubName: Full=TraV; | pAPEC-O2-R | CDS | 32761 | 516 | - | 0.531008 |
| traW | O2R_31 | pAPEC-O2-R | RBS | 28145 | 5 | - | 1 | ||
| traW | O2R_31 | TraW | SubName: Full=TraW; | pAPEC-O2-R | CDS | 27551 | 588 | - | 0.595238 |
| traX | O2R_15 | TraX | SubName: Full=TraX; | pAPEC-O2-R | CDS | 7540 | 747 | - | 0.582329 |
| traX | O2R_15 | pAPEC-O2-R | RBS | 8296 | 7 | - | 0.428571 | ||
| traY | O2R_47 | TraY | SubName: Full=TraY; | pAPEC-O2-R | CDS | 37846 | 321 | - | 0.423676 |
| trbA | O2R_25 | TrbA | SubName: Full=TrbA; | pAPEC-O2-R | CDS | 22727 | 348 | - | 0.393678 |
| trbC | O2R_29 | pAPEC-O2-R | RBS | 26536 | 4 | - | 0.25 | ||
| trbC | O2R_29 | periplasmic protein TrbC precursor | SubName: Full=Periplasmic protein TrbC; | pAPEC-O2-R | CDS | 25915 | 603 | - | 0.563847 |
| trbD | O2R_40 | TrbD | SubName: Full=IncF plasmid conjugative transfer protein TrbD; SubName: Full=TrbD; | pAPEC-O2-R | CDS | 33521 | 318 | - | 0.433962 |
| trbD | O2R_40 | pAPEC-O2-R | RBS | 33851 | 5 | - | 0.2 | ||
| trbG | O2R_39 | TrbG | SubName: Full=Conjugal transfer protein TrbG; SubName: Full=IncF plasmid conjugative transfer protein TrbG; SubName: Full=Putative type IV secretion-like conjugative transfer system protein TrbG; SubName: Full=TrbG; | pAPEC-O2-R | CDS | 33273 | 252 | - | 0.420635 |
| trbG | O2R_39 | pAPEC-O2-R | RBS | 33286 | 8 | - | 0.5 | ||
| trbI | O2R_32 | TrbI | SubName: Full=TrbI; | pAPEC-O2-R | CDS | 28180 | 387 | - | 0.568475 |
| trbJ | O2R_22 | TrbJ conjugal transfer protein | SubName: Full=TrbJ conjugal transfer protein; | pAPEC-O2-R | CDS | 21500 | 303 | - | 0.478548 |
| trbJ | O2R_22 | pAPEC-O2-R | RBS | 21508 | 10 | - | 0.7 | ||
| yacA | O2R_6 | pAPEC-O2-R | RBS | 1465 | 4 | - | 0.75 | ||
| yacA | O2R_6 | YacA | SubName: Full=YacA; | pAPEC-O2-R | CDS | 1189 | 270 | - | 0.507407 |
| yacB | O2R_5 | YacB | SubName: Full=YacB; | pAPEC-O2-R | CDS | 911 | 282 | - | 0.524823 |
| yacC | O2R_4 | YacC | SubName: Full=YacC; | pAPEC-O2-R | CDS | 17 | 849 | - | 0.56066 |
| yacC | O2R_4 | pAPEC-O2-R | RBS | 876 | 5 | - | 0.6 | ||
| ychA | O2R_75 | pAPEC-O2-R | RBS | 53721 | 8 | - | 0.5 | ||
| ychA | O2R_75 | YchA | SubName: Full=YchA; | pAPEC-O2-R | CDS | 52935 | 777 | - | 0.610039 |
| yciB | O2R_73 | pAPEC-O2-R | RBS | 52531 | 6 | - | 0.666667 | ||
| yciB | O2R_73 | YciB | SubName: Full=YciB; | pAPEC-O2-R | CDS | 52098 | 426 | - | 0.544601 |
| yfcB | O2R_81 | YfcB | SubName: Full=YfcB; | pAPEC-O2-R | CDS | 55913 | 507 | - | 0.542406 |
| yigB | O2R_11 | pAPEC-O2-R | RBS | 5447 | 4 | - | 0.5 | ||
| yigB | O2R_11 | YigB | SubName: Full=Putative nuclease; SubName: Full=Putative regulatory protein; SubName: Full=YigB; | pAPEC-O2-R | CDS | 4911 | 525 | - | 0.470476 |
| ykfF | O2R_61 | YkfF | RecName: Full=UPF0401 protein YubL; | pAPEC-O2-R | CDS | 46464 | 285 | - | 0.547368 |
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