TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-04-25 18:20:30

Gene list

Applied filters:

Organism: Escherichia coli, A2363

Number of genes found: 171

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli, A2363
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA O2R_94 conserved hypothetical proteinpAPEC-O2-R CDS66784 402 - 0.400498
NA O2R_77 hypothetical proteinpAPEC-O2-R CDS54205 222 - 0.540541
NA O2R_76 pAPEC-O2-R RBS54201 6 - 0.5
NA O2R_80 YfdApAPEC-O2-R CDS55494 438 - 0.541096
NA pAPEC-O2-R RBS73469 7 + 0.571429
NA O2R_12 conserved hypothetical proteinpAPEC-O2-R CDS5571 243 - 0.625514
NA O2R_99 conserved hypothetical proteinpAPEC-O2-R CDS71711 354 + 0.437853
NA O2R_87 conserved hypothetical proteinpAPEC-O2-R CDS61006 276 + 0.456522
NA O2R_104 conserved hypothetical proteinpAPEC-O2-R CDS80001 711 - 0.462729
NA O2R_14 conserved hypothetical proteinpAPEC-O2-R CDS6621 861 - 0.440186
NA O2R_66 hypothetical proteinpAPEC-O2-R CDS47985 165 - 0.612121
NA O2R_92 conserved hypothetical proteinpAPEC-O2-R CDS63876 975 - 0.588718
NA O2R_76 conserved hypothetical proteinpAPEC-O2-R CDS53757 435 - 0.577011
NA O2R_23 conserved hypothetical proteinpAPEC-O2-R CDS21792 546 - 0.582418
NA O2R_52 hypothetical proteinpAPEC-O2-R CDS41650 273 + 0.505495
NA O2R_35 conserved hypothetical proteinpAPEC-O2-R CDS31709 216 - 0.444444
NA O2R_65 hypothetical proteinpAPEC-O2-R CDS47701 234 + 0.713675
NA pAPEC-O2-R repeat_region96461 4768 + 0.502936
NA O2R_27 pAPEC-O2-R RBS23839 7 - 0.285714
NA O2R_60 conserved hypothetical proteinpAPEC-O2-R CDS44441 1959 - 0.588566
NA pAPEC-O2-R RBS69442 5 + 0.8
NA pAPEC-O2-R misc_feature1646 450 - 0.531111
NA O2R_105 conserved hypothetical proteinpAPEC-O2-R CDS81472 396 + 0.563131
NA O2R_102 conserved hypothetical proteinpAPEC-O2-R CDS76714 441 + 0.485261
NA O2R_78 DNA methylasepAPEC-O2-R CDS54427 684 - 0.577485
NA O2R_69 conserved hypothetical proteinpAPEC-O2-R CDS50173 231 - 0.580087
NA O2R_9 conserved hypothetical proteinpAPEC-O2-R CDS4028 591 - 0.497462
NA O2R_79 conserved hypothetical proteinpAPEC-O2-R CDS55186 345 - 0.628986
NA O2R_34 conserved hypothetical proteinpAPEC-O2-R CDS31319 363 - 0.38292
NA O2R_63 hypothetical proteinpAPEC-O2-R CDS47324 207 - 0.560386
NA O2R_54 hypothetical proteinpAPEC-O2-R CDS42144 213 - 0.671362
NA pAPEC-O2-R misc_feature16790 531 - 0.376648
NA O2R_91 hypothetical proteinpAPEC-O2-R CDS63464 153 + 0.477124
NA O2R_67 conserved hypothetical proteinpAPEC-O2-R CDS48149 564 - 0.590426
NA O2R_122 transposasepAPEC-O2-R CDS96461 3006 - 0.516633
NA O2R_64 conserved hypothetical proteinpAPEC-O2-R CDS47566 213 - 0.671362
NA O2R_74 hypothetical proteinpAPEC-O2-R CDS52654 171 + 0.654971
NA O2R_90 hypothetical proteinpAPEC-O2-R CDS63035 405 - 0.459259
NA O2R_51 conserved hypothetical proteinpAPEC-O2-R CDS40648 822 - 0.442822
NA pAPEC-O2-R repeat_region84186 9513 + 0.601282
NA O2R_27 conserved hypothetical proteinpAPEC-O2-R CDS23826 258 - 0.387597
NA pAPEC-O2-R repeat_region87156 2303 - 0.619627
NA pAPEC-O2-R misc_feature91893 345 - 0.501449
NA O2R_109 Tn1721 transposasepAPEC-O2-R CDS84186 2967 - 0.658915
NA O2R_89 hypothetical proteinpAPEC-O2-R CDS62269 609 - 0.490969
NA O2R_121 TniBdelta1pAPEC-O2-R CDS96271 198 - 0.606061
NA O2R_123 ResolvasepAPEC-O2-R CDS99628 558 + 0.532258
NA O2R_118 conserved hypothetical proteinpAPEC-O2-R CDS93198 501 + 0.650699
NA O2R_36 conserved hypothetical proteinpAPEC-O2-R CDS32004 474 - 0.464135
NA O2R_55 hypothetical proteinpAPEC-O2-R CDS42279 234 + 0.709402
NA O2R_104.2 transposasepAPEC-O2-R CDS80762 705 + 0.52766
NA O2R_110 resolvasepAPEC-O2-R CDS87156 561 - 0.655971
NA O2R_53 hypothetical proteinpAPEC-O2-R CDS41902 207 - 0.560386
NA O2R_72 conserved hypothetical proteinpAPEC-O2-R CDS51629 423 - 0.560284
NA O2R_70 conserved hypothetical proteinpAPEC-O2-R CDS50667 423 + 0.612293
NA O2R_71 conserved hypothetical proteinpAPEC-O2-R CDS51441 192 - 0.505208
NA pAPEC-O2-R misc_feature42988 237 + 0.49789
NA O2R_108 relaxasepAPEC-O2-R CDS83886 243 - 0.720165
NA O2R_68 conserved hypothetical proteinpAPEC-O2-R CDS48760 1362 - 0.567548
NA O2R_50 conserved hypothetical proteinpAPEC-O2-R CDS39758 594 + 0.446128
IS1326 pAPEC-O2-R repeat_region93807 2470 - 0.521457
IS26 pAPEC-O2-R repeat_region80699 820 + 0.520732
aadA4 O2R_115 pAPEC-O2-R RBS91696 5 + 0.2
aadA4 O2R_115 aminoglycoside-3'-adenyltransferasepAPEC-O2-R CDS90896 789 + 0.583016
bla O2R_124 beta-lactamasepAPEC-O2-R CDS100368 861 + 0.493612
catB3 O2R_114 pAPEC-O2-R RBS90196 4 + 0.75
catB3 O2R_114 chloramphenicol acetyltransferasepAPEC-O2-R CDS90206 633 + 0.494471
class I integron pAPEC-O2-R repeat_region88445 1014 - 0.612426
finO O2R_13 fertility inhibition proteinpAPEC-O2-R CDS5958 561 - 0.54902
finO O2R_13 pAPEC-O2-R RBS6524 4 - 0.75
folA O2R_113 dihydrofolate reductase type IpAPEC-O2-R CDS89615 474 + 0.396624
folA O2R_113 pAPEC-O2-R RBS89604 6 + 0.5
hha O2R_10 Hha proteinpAPEC-O2-R CDS4656 210 - 0.366667
hnh O2R_93 Hnh endonucleasepAPEC-O2-R CDS65488 909 + 0.359736
hok O2R_56 pAPEC-O2-R RBS42965 6 - 0.5
hok O2R_56 post-segregation killing proteinpAPEC-O2-R CDS42798 159 - 0.477987
impA O2R_83 ImpA UV protection proteinpAPEC-O2-R CDS57058 438 + 0.554795
impB O2R_125 ImpB UV protection proteinpAPEC-O2-R CDS57495 1272 + 0.513365
impC O2R_82 pAPEC-O2-R RBS56800 6 + 0.666667
impC O2R_82 ImpCpAPEC-O2-R CDS56813 249 + 0.514056
intI1 O2R_112 integrasepAPEC-O2-R CDS88445 1014 - 0.612426
istA O2R_120 IstApAPEC-O2-R CDS94646 1515 - 0.541914
istA O2R_120 pAPEC-O2-R RBS96168 7 - 0.428571
istB O2R_119 IstBpAPEC-O2-R CDS93874 783 - 0.501916
istB O2R_119 pAPEC-O2-R RBS94664 7 - 0.428571
parA O2R_86 putative plasmid partitioning proteinpAPEC-O2-R CDS60368 645 + 0.415504
parA O2R_86 pAPEC-O2-R RBS60359 4 + 0.75
psiA O2R_58 PsiApAPEC-O2-R CDS43236 720 - 0.602778
psiB O2R_59 PsiBpAPEC-O2-R CDS43952 435 - 0.572414
psiB O2R_59 pAPEC-O2-R RBS44395 7 - 0.571429
repA1 O2R_8 RepA1pAPEC-O2-R CDS2371 870 - 0.577011
resD O2R_88 resolvasepAPEC-O2-R CDS61419 783 - 0.581098
resD O2R_88 pAPEC-O2-R RBS62210 4 - 0.5
silA O2R_101 heavy metal efflux pumppAPEC-O2-R CDS73481 3147 + 0.523356
silB O2R_100 efflux transporter, RND family, MFP subunitpAPEC-O2-R CDS72178 1293 + 0.480278
silB O2R_100 pAPEC-O2-R RBS72168 6 + 0.333333
silC O2R_98 outer membrane efflux proteinpAPEC-O2-R CDS70298 1386 + 0.505772
silE O2R_95 silver-binding proteinpAPEC-O2-R CDS67278 495 - 0.515152
silP O2R_103 copper-translocating P-type ATPasepAPEC-O2-R CDS77252 2478 + 0.537934
silP O2R_103 pAPEC-O2-R RBS77268 8 + 0.375
silR O2R_97 SilRpAPEC-O2-R CDS69428 681 - 0.515419
silS O2R_96 SilSpAPEC-O2-R CDS67960 1476 - 0.493902
ssb O2R_62 single-stranded DNA binding proteinpAPEC-O2-R CDS46759 540 - 0.588889
ssb O2R_62 pAPEC-O2-R RBS47305 8 - 0.5
stbA O2R_85 pAPEC-O2-R RBS60146 6 - 0.666667
stbA O2R_85 stable plasmid inheritance protein ApAPEC-O2-R CDS59168 972 - 0.425926
stbB O2R_84 pAPEC-O2-R RBS59171 9 - 0.444444
stbB O2R_84 stable plasmid inheritance protein BpAPEC-O2-R CDS58771 393 - 0.463104
sulI O2R_117 pAPEC-O2-R RBS92218 5 + 0.8
sulI O2R_117 dihydropteroate synthasepAPEC-O2-R CDS92231 840 + 0.616667
tetA O2R_106 tetracycline efflux proteinpAPEC-O2-R CDS81899 1200 - 0.636667
tetR O2R_107 tetracycline repressor proteinpAPEC-O2-R CDS83177 678 + 0.626844
tnpM O2R_111 pAPEC-O2-R RBS88492 4 - 0.75
tnpM O2R_111 tnpMpAPEC-O2-R CDS87892 585 - 0.630769
traA O2R_46 TraA fimbrial protein precursor (pilin)pAPEC-O2-R CDS37453 360 - 0.505556
traA O2R_46 pAPEC-O2-R RBS37818 6 - 0.5
traB O2R_42 TraB pilus assembly proteinpAPEC-O2-R CDS34397 1428 - 0.572129
traC O2R_33 TraCpAPEC-O2-R CDS28563 2631 - 0.54504
traD O2R_17 TraDpAPEC-O2-R CDS13576 2151 - 0.528126
traD O2R_17 pAPEC-O2-R RBS15743 4 - 0.75
traE O2R_44 pAPEC-O2-R RBS37113 4 - 0.5
traE O2R_44 TraEpAPEC-O2-R CDS36539 567 - 0.467372
traF O2R_26 TraFpAPEC-O2-R CDS23090 744 - 0.509409
traG O2R_20 TraGpAPEC-O2-R CDS17308 2823 - 0.519306
traH O2R_21 TraH pilus assembly proteinpAPEC-O2-R CDS20127 1377 - 0.519245
traH O2R_21 pAPEC-O2-R RBS20138 7 - 0.714286
traI O2R_16 TraIpAPEC-O2-R CDS8306 5271 - 0.600266
traJ O2R_48 pAPEC-O2-R RBS38858 6 - 0.666667
traJ O2R_48 TraJpAPEC-O2-R CDS38167 687 - 0.353712
traK O2R_43 pAPEC-O2-R RBS35834 5 - 0.8
traK O2R_43 TraK lipoprotein precursorpAPEC-O2-R CDS35824 729 - 0.570645
traL O2R_45 TraLpAPEC-O2-R CDS37127 312 - 0.471154
traL O2R_45 pAPEC-O2-R RBS37446 6 - 0.333333
traM O2R_49 TraMpAPEC-O2-R CDS39044 384 - 0.398438
traN O2R_28 TraNpAPEC-O2-R CDS24110 1809 - 0.523494
traP O2R_41 pAPEC-O2-R RBS34415 8 - 0.75
traP O2R_41 TraPpAPEC-O2-R CDS33835 573 - 0.506108
traQ O2R_24 TraQpAPEC-O2-R CDS22324 285 - 0.526316
traR O2R_37 pAPEC-O2-R RBS32693 4 -
traR O2R_37 TraRpAPEC-O2-R CDS32470 213 - 0.469484
traT O2R_18 TraT enterobacterial complement resistance proteinpAPEC-O2-R CDS16027 777 - 0.492922
traU O2R_30 TraUpAPEC-O2-R CDS26562 993 - 0.554884
traV O2R_38 TraVpAPEC-O2-R CDS32761 516 - 0.531008
traW O2R_31 TraWpAPEC-O2-R CDS27551 588 - 0.595238
traW O2R_31 pAPEC-O2-R RBS28145 5 - 1
traX O2R_15 TraXpAPEC-O2-R CDS7540 747 - 0.582329
traX O2R_15 pAPEC-O2-R RBS8296 7 - 0.428571
traY O2R_47 TraYpAPEC-O2-R CDS37846 321 - 0.423676
trbA O2R_25 TrbApAPEC-O2-R CDS22727 348 - 0.393678
trbC O2R_29 pAPEC-O2-R RBS26536 4 - 0.25
trbC O2R_29 periplasmic protein TrbC precursorpAPEC-O2-R CDS25915 603 - 0.563847
trbD O2R_40 pAPEC-O2-R RBS33851 5 - 0.2
trbD O2R_40 TrbDpAPEC-O2-R CDS33521 318 - 0.433962
trbG O2R_39 pAPEC-O2-R RBS33286 8 - 0.5
trbG O2R_39 TrbGpAPEC-O2-R CDS33273 252 - 0.420635
trbI O2R_32 TrbIpAPEC-O2-R CDS28180 387 - 0.568475
trbJ O2R_22 TrbJ conjugal transfer proteinpAPEC-O2-R CDS21500 303 - 0.478548
trbJ O2R_22 pAPEC-O2-R RBS21508 10 - 0.7
yacA O2R_6 YacApAPEC-O2-R CDS1189 270 - 0.507407
yacA O2R_6 pAPEC-O2-R RBS1465 4 - 0.75
yacB O2R_5 YacBpAPEC-O2-R CDS911 282 - 0.524823
yacC O2R_4 pAPEC-O2-R RBS876 5 - 0.6
yacC O2R_4 YacCpAPEC-O2-R CDS17 849 - 0.56066
ychA O2R_75 YchApAPEC-O2-R CDS52935 777 - 0.610039
ychA O2R_75 pAPEC-O2-R RBS53721 8 - 0.5
yciB O2R_73 pAPEC-O2-R RBS52531 6 - 0.666667
yciB O2R_73 YciBpAPEC-O2-R CDS52098 426 - 0.544601
yfcB O2R_81 YfcBpAPEC-O2-R CDS55913 507 - 0.542406
yigB O2R_11 YigBpAPEC-O2-R CDS4911 525 - 0.470476
yigB O2R_11 pAPEC-O2-R RBS5447 4 - 0.5
ykfF O2R_61 YkfFpAPEC-O2-R CDS46464 285 - 0.547368