Gene list
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Organism: Pseudomonas sp. ND6, ND6
Number of genes found: 107
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Pseudomonas sp. ND6, ND6 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ND045 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 44082 | 450 | + | 0.511111 |
NA | ND080 | putative transposase | SubName: Full=Putative transposase; | pND6-1 | CDS | 78658 | 345 | - | 0.597101 |
NA | ND069 | glutathione-S-transferase-like protein | SubName: Full=Glutathione-S-transferase-like protein; | pND6-1 | CDS | 69687 | 378 | + | 0.608466 |
NA | ND037 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 37546 | 477 | - | 0.51153 |
NA | ND075 | transcriptional regulator | SubName: Full=Transcriptional regulator; | pND6-1 | CDS | 74859 | 915 | - | 0.590164 |
NA | ND048 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 47815 | 720 | + | 0.469444 |
NA | ND052 | probable ATP-dependent DNA ligase | SubName: Full=Probable ATP-dependent DNA ligase; | pND6-1 | CDS | 53213 | 960 | - | 0.576042 |
NA | ND010 | NADH oxidase | SubName: Full=NADH oxidase; | pND6-1 | CDS | 9307 | 1401 | + | 0.600999 |
NA | ND026 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 26826 | 285 | - | 0.508772 |
NA | ND049 | Lin2600 dehydrogenase | SubName: Full=Lin2600 dehydrogenase; | pND6-1 | CDS | 48696 | 1149 | + | 0.434291 |
NA | ND046 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 44886 | 276 | + | 0.565217 |
NA | ND036 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 37133 | 441 | - | 0.521542 |
NA | ND041 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 40623 | 762 | + | 0.587927 |
NA | ND102 | putative integrase | SubName: Full=Putative integrase; | pND6-1 | CDS | 101005 | 819 | - | 0.54823 |
NA | ND047 | putative DNA modification methylase | SubName: Full=Putative DNA modification methylase; | pND6-1 | CDS | 45547 | 1770 | + | 0.567797 |
NA | ND070 | putative RNA polymerase | SubName: Full=Putative RNA polymerase; | pND6-1 | CDS | 70258 | 438 | - | 0.579909 |
NA | ND027 | unknown | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 27231 | 1050 | - | 0.632381 |
NA | ND051 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 52273 | 546 | + | 0.582418 |
NA | ND033 | putative exodeoxyribonuclease VII large subunit | SubName: Full=Putative exodeoxyribonuclease VII large subunit; | pND6-1 | CDS | 34195 | 1479 | - | 0.610548 |
NA | ND002 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 278 | 228 | - | 0.539474 |
NA | ND011 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 10704 | 543 | + | 0.593002 |
NA | ND079 | transposase | SubName: Full=Transposase; | pND6-1 | CDS | 78217 | 387 | - | 0.594315 |
NA | ND018 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 19054 | 909 | - | 0.629263 |
NA | ND035 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 36813 | 273 | - | 0.527473 |
NA | ND101 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 100343 | 198 | - | 0.454545 |
NA | ND025 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 26226 | 396 | + | 0.590909 |
NA | ND099 | AGR-L-2007p integrase | SubName: Full=AGR-L-2007p integrase; | pND6-1 | CDS | 97878 | 957 | + | 0.575758 |
NA | ND100 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 99162 | 984 | - | 0.541667 |
NA | ND042 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 41338 | 288 | + | 0.59375 |
NA | ND077 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 76934 | 306 | - | 0.558824 |
NA | ND078 | transposase | SubName: Full=Transposase; | pND6-1 | CDS | 77552 | 708 | - | 0.611582 |
NA | ND009 | putative DNA helicase | SubName: Full=Putative DNA helicase; | pND6-1 | CDS | 6579 | 2082 | + | 0.550432 |
NA | ND001 | putative transposase | SubName: Full=Putative transposase; | pND6-1 | CDS | 1 | 333 | - | 0.591592 |
NA | ND071 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 71388 | 984 | - | 0.551829 |
NA | ND073 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 72705 | 756 | - | 0.60582 |
NA | ND092 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 90626 | 510 | + | 0.627451 |
NA | ND030 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 30573 | 792 | + | 0.59596 |
NA | ND022 | lipoprotein signal peptidase | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | pND6-1 | CDS | 23937 | 513 | + | 0.504873 |
NA | ND029 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 29663 | 588 | - | 0.532313 |
NA | ND038 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 38117 | 357 | - | 0.509804 |
NA | ND074 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 74118 | 561 | - | 0.629234 |
NA | ND094 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 91662 | 336 | - | 0.583333 |
NA | ND028 | integrase-like protein | SubName: Full=Integrase-like protein; | pND6-1 | CDS | 28422 | 1056 | + | 0.618371 |
NA | ND065 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 66043 | 414 | - | 0.647343 |
NA | ND039 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 38666 | 768 | - | 0.576823 |
NA | ND031 | probable helicase | SubName: Full=Probable helicase; | pND6-1 | CDS | 31343 | 1638 | - | 0.575092 |
NA | ND072 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 72346 | 360 | - | 0.6 |
NA | ND095 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 91978 | 378 | - | 0.574074 |
NA | ND021 | putative transporter protein | SubName: Full=Putative transporter protein; | pND6-1 | CDS | 23037 | 897 | + | 0.573021 |
NA | ND044 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 43255 | 354 | + | 0.556497 |
NA | ND003 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 475 | 369 | + | 0.544715 |
NA | ND034 | hypothetical protein | SubName: Full=Uncharacterized protein; | pND6-1 | CDS | 35862 | 855 | - | 0.576608 |
NA | ND043 | probable peptidase | SubName: Full=Probable peptidase; | pND6-1 | CDS | 41692 | 777 | - | 0.550837 |
NA | ND040 | putative DNA or RNA helicases | SubName: Full=Putative DNA or RNA helicases; | pND6-1 | CDS | 39452 | 339 | - | 0.563422 |
NA | ND076 | putative dehydrogenase | SubName: Full=Putative dehydrogenase; | pND6-1 | CDS | 76078 | 774 | + | 0.559432 |
IS1396 | pND6-1 | repeat_region | 24494 | 1325 | + | 0.595472 | |||
IS222 | pND6-1 | repeat_region | 1 | 371 | - | 0.584906 | |||
IS222 | pND6-1 | repeat_region | 100999 | 859 | - | 0.549476 | |||
ISPsp1 | pND6-1 | repeat_region | 65363 | 406 | + | 0.571429 | |||
ISPst1 | pND6-1 | repeat_region | 78673 | 581 | - | 0.590361 | |||
areB | ND014 | benzyl alcohol dehydrogenase | SubName: Full=Benzyl alcohol dehydrogenase; | pND6-1 | CDS | 13946 | 1134 | - | 0.597002 |
atsA | ND019 | arylsulfatase | SubName: Full=Arylsulfatase; | pND6-1 | CDS | 19934 | 1980 | - | 0.574242 |
benK | ND017 | benzoate transporter protein | SubName: Full=Benzoate transporter protein; | pND6-1 | CDS | 17544 | 1350 | - | 0.59037 |
catA | ND015 | catechol 1,2-dioxygenase alpha chain | SubName: Full=Catechol 1,2-dioxygenase alpha chain; | pND6-1 | CDS | 15119 | 939 | - | 0.610224 |
chnR | ND012 | transcriptional activator | SubName: Full=Transcriptional activator; | pND6-1 | CDS | 11424 | 930 | + | 0.564516 |
cztO | ND024 | outer membrane porin precursor | SubName: Full=Outer membrane porin; | pND6-1 | CDS | 25930 | 378 | + | 0.542328 |
gst | ND066 | glutathione-S-transferase-like protein | SubName: Full=Glutathione-S-transferase-like protein; | pND6-1 | CDS | 66562 | 618 | + | 0.613269 |
intA | ND050 | AGR-L-2007p integrase | SubName: Full=AGR-L-2007p integrase; | pND6-1 | CDS | 50964 | 1260 | + | 0.573016 |
mocA | ND068 | oxido-reductase/dehydratase | SubName: Full=Oxido-reductase/dehydratase; | pND6-1 | CDS | 68639 | 1032 | + | 0.578488 |
morB | ND067 | morphinone reductase | SubName: Full=Morphinone reductase; | pND6-1 | CDS | 67191 | 1065 | + | 0.64507 |
nahAa | ND053 | naphthalene dioxygenase reductase | SubName: Full=Naphthalene dioxygenase reductase; | pND6-1 | CDS | 54342 | 987 | + | 0.559271 |
nahAb | ND054 | naphthalene dioxygenase ferredoxin | SubName: Full=Naphthalene dioxygenase ferredoxin; | pND6-1 | CDS | 55472 | 315 | + | 0.507937 |
nahAc | ND055 | naphthalene dioxygenase Fe-S protein large subunit | SubName: Full=Naphthalene dioxygenase Fe-S protein large subunit; | pND6-1 | CDS | 55857 | 1350 | + | 0.525926 |
nahAd | ND056 | naphthalene dioxygenase Fe-S protein small subunit | SubName: Full=Naphthalene dioxygenase Fe-S protein small subunit; | pND6-1 | CDS | 57221 | 585 | + | 0.502564 |
nahB | ND057 | naphthalene cis-dihydrodiol dehydrogenase | SubName: Full=Naphthalene cis-dihydrodiol dehydrogenase; | pND6-1 | CDS | 57826 | 828 | + | 0.521739 |
nahC | ND059 | 1,2-dihydroxy-naphthalene dioxygenase | SubName: Full=1,2-dihydroxy-naphthalene dioxygenase; | pND6-1 | CDS | 60179 | 909 | + | 0.542354 |
nahD | ND062 | 2-hydroxychromene-2-carboxylate dehydrogenase | SubName: Full=2-hydroxychromene-2-carboxylate dehydrogenase; | pND6-1 | CDS | 63246 | 639 | + | 0.472613 |
nahE | ND061 | 1,2-dihydroxybenzyl pyruvate aldolase | SubName: Full=1,2-dihydroxybenzyl pyruvate aldolase; | pND6-1 | CDS | 62027 | 1005 | + | 0.546269 |
nahF | ND013 | salicylaldehyde dehydrogenase | SubName: Full=Salicylaldehyde dehydrogenase; | pND6-1 | CDS | 12452 | 1452 | - | 0.588154 |
nahF | ND058 | salicylaldehyde dehydrogenase | SubName: Full=Salicylaldehyde dehydrogenase; | pND6-1 | CDS | 58700 | 1452 | + | 0.570248 |
nahG | ND091 | salicylate hydroxylase | SubName: Full=Salicylate hydroxylase; | pND6-1 | CDS | 89257 | 1305 | - | 0.638314 |
nahG | ND016 | salicylate hydroxylase | SubName: Full=Salicylate hydroxylase; | pND6-1 | CDS | 16132 | 1290 | - | 0.610078 |
nahH | ND089 | catechol 2,3-dioxygenase | SubName: Full=Catechol 2,3-dioxygenase; | pND6-1 | CDS | 87496 | 924 | - | 0.546537 |
nahI | ND088 | hydroxymuconic semialdehyde dehydrogenase | SubName: Full=Hydroxymuconic semialdehyde dehydrogenase; | pND6-1 | CDS | 86001 | 1461 | - | 0.661191 |
nahJ | ND082 | 4-oxalocrotonate isomerase | SubName: Full=4-oxalocrotonate isomerase; | pND6-1 | CDS | 81283 | 192 | - | 0.604167 |
nahK | ND083 | 4-oxalcrotonate decarboxylase | SubName: Full=4-oxalcrotonate decarboxylase; | pND6-1 | CDS | 81529 | 795 | - | 0.645283 |
nahL | ND086 | 2-oxopent-4-enoate hydratase | SubName: Full=2-oxopent-4-enoate hydratase; | pND6-1 | CDS | 84315 | 786 | - | 0.642494 |
nahM | ND084 | 2-oxo-4-hydroxypentanoate aldolase | RecName: Full=4-hydroxy-2-oxovalerate aldolase; Short=HOA; EC=4.1.3.39; AltName: Full=4-hydroxy-2-keto-pentanoic acid aldolase; AltName: Full=4-hydroxy-2-oxopentanoate aldolase; | pND6-1 | CDS | 82320 | 1041 | - | 0.654179 |
nahN | ND087 | hydroxymuconic semialdehyde hydrolase | SubName: Full=Hydroxymuconic semialdehyde hydrolase; | pND6-1 | CDS | 85112 | 882 | - | 0.684807 |
nahO | ND085 | acetaldehyde dehydrogenase | RecName: Full=Acetaldehyde dehydrogenase; EC=1.2.1.10; AltName: Full=Acetaldehyde dehydrogenase [acetylating]; | pND6-1 | CDS | 83372 | 924 | - | 0.656926 |
nahQ | ND060 | dibenzothiophene oxidation protein | SubName: Full=Dibenzothiophene oxidation protein; | pND6-1 | CDS | 61331 | 648 | + | 0.493827 |
nahR | ND098 | regulatory protein | SubName: Full=Regulatory protein; | pND6-1 | CDS | 96348 | 903 | + | 0.609081 |
nahT | ND090 | chloroplast ferredoxin-like protein | SubName: Full=Chloroplast ferredoxin-like protein; | pND6-1 | CDS | 88440 | 318 | - | 0.562893 |
nahY | ND081 | naphthalene chemotaxis protein | SubName: Full=Naphthalene chemotaxis protein; | pND6-1 | CDS | 79430 | 1617 | - | 0.519481 |
parA | ND006 | ParA | SubName: Full=ParA; | pND6-1 | CDS | 2364 | 1185 | - | 0.534177 |
parB | ND032 | chromosome partitioning protein | SubName: Full=Chromosome partitioning protein; | pND6-1 | CDS | 33635 | 384 | - | 0.515625 |
parB | ND005 | ParB | SubName: Full=ParB; | pND6-1 | CDS | 1192 | 1017 | - | 0.556539 |
parC | ND004 | ParC | SubName: Full=ParC; | pND6-1 | CDS | 757 | 321 | - | 0.548287 |
parW | ND007 | ParW | SubName: Full=ParW; | pND6-1 | CDS | 3707 | 480 | - | 0.541667 |
pbrR | ND020 | regulatory protein | SubName: Full=Regulatory protein; | pND6-1 | CDS | 22534 | 408 | - | 0.553922 |
repA | ND008 | RepA | SubName: Full=RepA; | pND6-1 | CDS | 5212 | 867 | + | 0.534025 |
tnpA | ND023 | tranposase TnpA | SubName: Full=Tranposase TnpA; | pND6-1 | CDS | 24546 | 1215 | + | 0.602469 |
tnpA | ND097 | transposase TnpA | SubName: Full=Transposase TnpA; | pND6-1 | CDS | 93133 | 3030 | + | 0.607591 |
tnpA1 | ND064 | transposase | SubName: Full=Transposase; | pND6-1 | CDS | 65398 | 330 | + | 0.584848 |
tnpC | ND093 | putative TnpA repressor protein | SubName: Full=Putative TnpA repressor protein; | pND6-1 | CDS | 91312 | 336 | - | 0.58631 |
tnpR | ND063 | resolvase | SubName: Full=Resolvase; | pND6-1 | CDS | 64294 | 474 | - | 0.628692 |
tnpR | ND096 | Tn5501 resolvase | SubName: Full=Tn5501 resolvase; | pND6-1 | CDS | 92514 | 636 | + | 0.638365 |