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2024-05-01 15:55:00

Gene list

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Organism: Lactobacillus fermentum

Number of genes found: 50

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus fermentum
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA putative RepB proteinSubName: Full=Putative RepB protein; pLME300 CDS419 780 + 0.353846
NA pLME300 repeat_unit16752 8 + 0.25
NA pLME300 RBS12382 6 + 0.333333
NA pLME300 RBS7008 6 + 0.333333
NA pLME300 repeat_unit304 22 + 0.272727
NA pLME300 repeat_unit326 22 + 0.272727
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS12399 3441 + 0.396978
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS16869 453 + 0.403974
NA pLME300 RBS408 5 + 0.6
NA pLME300 RBS8826 5 - 0.2
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS11761 168 - 0.345238
NA pLME300 repeat_unit17016 8 + 0.375
NA pLME300 repeat_unit393 6 +
NA pLME300 rep_origin174 46 + 0.130435
NA truncated rRNA methylase leader peptideSubName: Full=Truncated rRNA methylase leader peptide; pLME300 CDS11629 69 - 0.289855
NA pLME300 repeat_unit282 22 + 0.272727
NA putative resolvaseSubName: Full=Putative resolvase; pLME300 CDS5974 579 - 0.373057
NA putative mobilization protein MobASubName: Full=Putative mobilization protein MobA; pLME300 CDS17302 1281 + 0.410617
NA putative endonuclease IIISubName: Full=Putative endonuclease III; pLME300 CDS8281 534 - 0.385768
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS18263 951 + 0.402734
NA pLME300 repeat_unit260 22 + 0.272727
NA pLME300 repeat_unit17041 8 + 0.375
NA putative YeeA proteinSubName: Full=Putative YeeA protein; pLME300 CDS1928 2799 + 0.36906
NA pLME300 repeat_unit16898 7 + 0.285714
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS7683 468 + 0.393162
NA pLME300 RBS4714 6 + 0.333333
NA putative Mrr restiction system proteinSubName: Full=Putative Mrr restiction system protein; pLME300 CDS4730 942 + 0.33758
NA pLME300 RBS6561 4 - 0.5
NA pLME300 repeat_unit16847 8 +
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS7021 381 + 0.346457
NA pLME300 oriT16740 309 + 0.368932
NA pLME300 repeat_unit384 6 +
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS6681 267 + 0.29588
NA pLME300 repeat_unit16740 8 + 0.25
NA pLME300 repeat_unit16881 7 + 0.142857
NA pLME300 RBS11721 5 - 0.8
NA pLME300 RBS17288 3 + 0.333333
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS1200 567 - 0.402116
NA pLME300 RBS10771 7 - 0.571429
NA pLME300 RBS6668 5 + 0.4
NA hypothetical proteinSubName: Full=Uncharacterized protein; pLME300 CDS10631 132 - 0.371212
NA pLME300 RBS11933 4 - 0.25
NA pLME300 RBS18247 7 + 0.428571
NA pLME300 RBS1775 6 - 0.5
NA pLME300 RBS1915 6 + 0.333333
NA pLME300 repeat_unit16859 8 +
erm pLME300 RBS11513 4 - 0.5
erm erythromycin resistance proteinSubName: Full=Erythromycin resistance protein; pLME300 CDS10767 738 - 0.277778
vatE streptogramin A resistance proteinSubName: Full=Streptogramin A resistance protein; pLME300 CDS9458 645 - 0.390698
vatE pLME300 RBS10110 5 - 0.8