Gene list
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Organism: Salmonella enterica subsp. enterica serovar Choleraesuis, RF-1
Gene type: CDS
Number of genes found: 55
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Choleraesuis, RF-1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | 50k virulence plasmid | CDS | 9441 | 471 | - | 0.698514 | ||
NA | 50k virulence plasmid | CDS | 14053 | 489 | + | 0.458078 | ||
NA | 50k virulence plasmid | CDS | 12527 | 291 | - | 0.621993 | ||
NA | 50k virulence plasmid | CDS | 26652 | 525 | - | 0.601905 | ||
NA | 50k virulence plasmid | CDS | 43588 | 480 | - | 0.527083 | ||
NA | 50k virulence plasmid | CDS | 47873 | 957 | + | 0.54023 | ||
NA | 50k virulence plasmid | CDS | 47377 | 495 | + | 0.547475 | ||
NA | 50k virulence plasmid | CDS | 34208 | 612 | - | 0.423203 | ||
NA | 50k virulence plasmid | CDS | 25077 | 495 | + | 0.569697 | ||
NA | cryptic plasmid | CDS | 2914 | 489 | - | 0.511247 | ||
NA | 50k virulence plasmid | CDS | 41178 | 417 | - | 0.527578 | ||
NA | 50k virulence plasmid | CDS | 39579 | 945 | + | 0.538624 | ||
NA | 50k virulence plasmid | CDS | 8670 | 546 | - | 0.672161 | ||
NA | 50k virulence plasmid | CDS | 9982 | 507 | - | 0.646943 | ||
NA | 50k virulence plasmid | CDS | 32935 | 732 | - | 0.506831 | ||
NA | cryptic plasmid | CDS | 5674 | 345 | - | 0.576812 | ||
NA | 50k virulence plasmid | CDS | 30384 | 2181 | - | 0.541495 | ||
NA | 50k virulence plasmid | CDS | 25817 | 564 | - | 0.585106 | ||
NA | cryptic plasmid | CDS | 1999 | 150 | + | 0.493333 | ||
NA | cryptic plasmid | CDS | 1 | 816 | - | 0.607843 | ||
NA | cryptic plasmid | CDS | 3572 | 390 | + | 0.45641 | ||
NA | 50k virulence plasmid | CDS | 10632 | 552 | - | 0.657609 | ||
NA | 50k virulence plasmid | CDS | 46242 | 1089 | + | 0.556474 | ||
NA | 50k virulence plasmid | CDS | 28609 | 1083 | - | 0.584488 | ||
NA | 50k virulence plasmid | CDS | 12009 | 522 | - | 0.597701 | ||
NA | 50k virulence plasmid | CDS | 29783 | 483 | - | 0.532091 | ||
NA | 50k virulence plasmid | CDS | 17305 | 387 | - | 0.457364 | ||
NA | 50k virulence plasmid | CDS | 28038 | 438 | - | 0.609589 | ||
NA | 50k virulence plasmid | CDS | 41697 | 417 | - | 0.601918 | ||
NA | cryptic plasmid | CDS | 2354 | 249 | + | 0.417671 | ||
NA | cryptic plasmid | CDS | 4005 | 1494 | + | 0.607764 | ||
IS630 | ransposase of IS630 | 50k virulence plasmid | CDS | 1 | 1038 | - | 0.520231 | |
copB/repC | CopB/RepC | 50k virulence plasmid | CDS | 24659 | 246 | - | 0.390244 | |
letB | LetB | 50k virulence plasmid | CDS | 12819 | 306 | - | 0.575163 | |
mig5 | Mig5 | 50k virulence plasmid | CDS | 44715 | 741 | + | 0.492578 | |
orfE | OrfE | 50k virulence plasmid | CDS | 7815 | 351 | + | 0.467236 | |
parA | ParA | 50k virulence plasmid | CDS | 38202 | 966 | - | 0.464803 | |
parB | ParB | 50k virulence plasmid | CDS | 37093 | 870 | - | 0.451724 | |
pefA | PefA | 50k virulence plasmid | CDS | 18974 | 519 | + | 0.549133 | |
pefB | PefB | 50k virulence plasmid | CDS | 18397 | 303 | + | 0.435644 | |
pefC | PefC | 50k virulence plasmid | CDS | 19719 | 2409 | + | 0.600664 | |
pefD | PefD | 50k virulence plasmid | CDS | 22129 | 684 | + | 0.580409 | |
repA/repB | RepA/RepB | 50k virulence plasmid | CDS | 23470 | 870 | - | 0.568965 | |
repA/repC | RepA/RepC | 50k virulence plasmid | CDS | 15783 | 1020 | + | 0.519608 | |
rlgA | RlgA | 50k virulence plasmid | CDS | 45662 | 561 | + | 0.56328 | |
rsd | Rsd | 50k virulence plasmid | CDS | 11192 | 783 | - | 0.606641 | |
samA | SamA | 50k virulence plasmid | CDS | 35211 | 423 | + | 0.55792 | |
samB | SamB | 50k virulence plasmid | CDS | 35633 | 1275 | + | 0.538039 | |
spvA | SpvA | 50k virulence plasmid | CDS | 2565 | 768 | + | 0.544271 | |
spvB | SpvB | 50k virulence plasmid | CDS | 3515 | 1776 | + | 0.518018 | |
spvC | SpvC | 50k virulence plasmid | CDS | 5571 | 726 | + | 0.453168 | |
spvD | SpvD | 50k virulence plasmid | CDS | 6556 | 651 | + | 0.330261 | |
spvR | SpvR | 50k virulence plasmid | CDS | 1161 | 894 | + | 0.40604 | |
tap/repC | Tap/RepC | 50k virulence plasmid | CDS | 24332 | 78 | - | 0.410256 | |
tlpA | TlpA | 50k virulence plasmid | CDS | 42199 | 1116 | - | 0.585125 |