Gene list
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Organism: Yersinia pestis KIM, KIM10+
Number of genes found: 195
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis KIM, KIM10+ | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | pMT-1 | misc_difference | 47462 | 1 | + | |||
NA | pMT-1 | misc_difference | 57361 | 1 | + | 1 | ||
NA | pMT-1 | misc_feature | 58675 | 71 | + | 0.366197 | ||
NA | pMT-1 | misc_feature | 64109 | 25 | + | 0.4 | ||
NA | pMT-1 | misc_difference | 77814 | 1 | + | 1 | ||
NA | pMT-1 | repeat_region | 2265 | 19 | - | 0.421053 | ||
NA | pMT-1 | misc_difference | 70104 | 3 | + | 1 | ||
NA | pMT-1 | misc_feature | 58627 | 36 | + | 0.444444 | ||
NA | pMT-1 | misc_feature | 58641 | 51 | + | 0.411765 | ||
NA | pMT-1 | misc_difference | 11541 | 3 | + | 0.666667 | ||
NA | pMT-1 | misc_feature | 53973 | 25 | + | 0.24 | ||
NA | pMT-1 | repeat_region | 46383 | 1954 | + | 0.514841 | ||
NA | pMT-1 | repeat_region | 665 | 19 | - | 0.578947 | ||
NA | pMT-1 | repeat_region | 2222 | 19 | - | 0.473684 | ||
NA | pMT-1 | misc_feature | 77738 | 43 | + | 0.302326 | ||
NA | pMT-1 | misc_feature | 54023 | 197 | + | 0.517766 | ||
NA | pMT-1 | misc_difference | 72836 | 1 | + | |||
NA | pMT-1 | misc_difference | 57533 | 1 | + | 1 | ||
NA | pMT-1 | repeat_region | 2307 | 19 | - | 0.526316 | ||
NA | pMT-1 | repeat_region | 1819 | 19 | - | 0.368421 | ||
NA | pMT-1 | repeat_region | 323 | 19 | + | 0.421053 | ||
NA | pMT-1 | repeat_region | 72777 | 1954 | + | 0.51433 | ||
NA | pMT-1 | misc_feature | 58626 | 37 | + | 0.432432 | ||
NA | pMT-1 | misc_difference | 70051 | 8 | + | 0.875 | ||
NA | pMT-1 | misc_feature | 50872 | 1385 | + | 0.480866 | ||
NA | pMT-1 | repeat_region | 9576 | 717 | + | 0.460251 | ||
NA | pMT-1 | misc_feature | 54411 | 1149 | + | 0.548303 | ||
NA | pMT-1 | misc_feature | 60886 | 85 | + | 0.552941 | ||
NA | pMT-1 | misc_difference | 57449 | 2 | + | 0.5 | ||
NA | pMT-1 | misc_feature | 59329 | 158 | + | 0.537975 | ||
NA | pMT-1 | misc_difference | 48337 | 24441 | + | 0.496174 | ||
NA | pMT-1 | misc_difference | 48277 | 1 | + | 1 | ||
NA | pMT-1 | misc_feature | 54418 | 1142 | + | 0.548161 | ||
NA | pMT-1 | misc_difference | 57631 | 1 | + | |||
NA | pMT-1 | repeat_region | 1925 | 21 | - | 0.333333 | ||
NA | pMT-1 | repeat_region | 410 | 19 | + | 0.421053 | ||
NA | pMT-1 | repeat_region | 1841 | 19 | - | 0.526316 | ||
NA | pMT-1 | misc_feature | 70050 | 24 | + | 0.666667 | ||
NA | pMT-1 | repeat_region | 695 | 19 | - | 0.368421 | ||
NA | pMT-1 | misc_difference | 56339 | 3 | + | 0.666667 | ||
NA | pMT-1 | repeat_region | 2245 | 19 | - | 0.526316 | ||
NA | pMT-1 | repeat_region | 2287 | 19 | - | 0.421053 | ||
NA | pMT-1 | misc_feature | 59891 | 227 | + | 0.497797 | ||
NA | pMT-1 | repeat_region | 593 | 19 | - | 0.526316 | ||
NA | pMT-1 | repeat_region | 487 | 19 | + | 0.421053 | ||
NA | pMT-1 | misc_feature | 61661 | 274 | + | 0.405109 | ||
NA | pMT-1 | repeat_region | 449 | 19 | + | 0.473684 | ||
NA | pMT-1 | repeat_region | 341 | 23 | - | 0.608696 | ||
NA | pMT-1 | repeat_region | 1883 | 19 | - | 0.421053 | ||
NA | pMT-1 | repeat_region | 242 | 19 | + | 0.368421 | ||
NA | pMT-1 | repeat_region | 1904 | 19 | - | 0.368421 | ||
NA | pMT-1 | rep_origin | 151 | 1911 | - | 0.495552 | ||
NA | pMT-1 | repeat_region | 282 | 19 | + | 0.368421 | ||
NA | pMT-1 | repeat_region | 617 | 19 | - | 0.421053 | ||
NA | pMT-1 | repeat_region | 1862 | 19 | - | 0.526316 | ||
NA | pMT-1 | repeat_region | 202 | 19 | + | 0.368421 | ||
NA | pMT-1 | misc_difference | 78024 | 1 | + | 1 | ||
NA | pMT-1 | repeat_region | 155 | 19 | + | 0.578947 | ||
ORF4 | putative C-type natriuretic protein | pMT-1 | CDS | 76298 | 306 | + | 0.48366 | |
Y1002 | unknown | pMT-1 | CDS | 2526 | 645 | + | 0.527132 | |
Y1004 | hypothetical lipoprotein | pMT-1 | CDS | 3530 | 1023 | - | 0.449658 | |
Y1005 | unknown | pMT-1 | CDS | 4449 | 273 | - | 0.43956 | |
Y1006 | unknown | pMT-1 | CDS | 4968 | 1086 | + | 0.540516 | |
Y1007 | unknown | pMT-1 | CDS | 6008 | 267 | + | 0.501873 | |
Y1008 | putative exonuclease | pMT-1 | CDS | 6271 | 1929 | + | 0.52929 | |
Y1009 | pMT-1 | misc_difference | 8567 | 3 | + | 0.666667 | ||
Y1009 | unknown | pMT-1 | CDS | 8189 | 747 | + | 0.496653 | |
Y1010 | pMT-1 | misc_difference | 9487 | 3 | + | 0.666667 | ||
Y1010 | unknown | pMT-1 | CDS | 8948 | 570 | + | 0.52807 | |
Y1011 | transposase | pMT-1 | CDS | 9675 | 510 | + | 0.458824 | |
Y1011 | pMT-1 | misc_difference | 9802 | 4 | + | 0.75 | ||
Y1012 | unknown | pMT-1 | CDS | 10315 | 351 | + | 0.498576 | |
Y1013 | pMT-1 | misc_difference | 10674 | 3 | + | 1 | ||
Y1013 | unknown | pMT-1 | CDS | 10625 | 234 | + | 0.529915 | |
Y1015 | unknown | pMT-1 | CDS | 10871 | 483 | + | 0.503106 | |
Y1016 | unknown | pMT-1 | CDS | 11332 | 360 | - | 0.563889 | |
Y1017 | unknown | pMT-1 | CDS | 11992 | 228 | - | 0.372807 | |
Y1018 | unknown | pMT-1 | CDS | 12304 | 651 | - | 0.394777 | |
Y1019 | unknown | pMT-1 | CDS | 13278 | 564 | - | 0.514184 | |
Y1020 | unknown | pMT-1 | CDS | 13810 | 423 | - | 0.541371 | |
Y1021 | unknown | pMT-1 | CDS | 14292 | 279 | - | 0.458781 | |
Y1022 | unknown | pMT-1 | CDS | 14573 | 1560 | - | 0.514744 | |
Y1023 | unknown | pMT-1 | CDS | 16197 | 699 | + | 0.527897 | |
Y1024 | unknown | pMT-1 | CDS | 16862 | 702 | + | 0.55698 | |
Y1025 | putative ABC transporter | pMT-1 | CDS | 17500 | 699 | + | 0.553648 | |
Y1026 | unknown | pMT-1 | CDS | 18191 | 255 | + | 0.52549 | |
Y1027 | unknown | pMT-1 | CDS | 18442 | 900 | + | 0.556667 | |
Y1028 | unknown | pMT-1 | CDS | 19351 | 267 | + | 0.524345 | |
Y1029 | unknown | pMT-1 | CDS | 19813 | 642 | + | 0.556075 | |
Y1030 | unknown | pMT-1 | CDS | 20457 | 1257 | + | 0.540971 | |
Y1031 | unknown | pMT-1 | CDS | 21732 | 1590 | + | 0.509434 | |
Y1032 | unknown | pMT-1 | CDS | 23344 | 456 | + | 0.576754 | |
Y1033 | unknown | pMT-1 | CDS | 23873 | 372 | + | 0.534946 | |
Y1034 | unknown | pMT-1 | CDS | 24271 | 876 | + | 0.539954 | |
Y1035 | unknown | pMT-1 | CDS | 25221 | 663 | + | 0.526395 | |
Y1036 | unknown | pMT-1 | CDS | 25927 | 435 | + | 0.51954 | |
Y1037 | unknown | pMT-1 | CDS | 26361 | 834 | + | 0.544365 | |
Y1038 | unknown | pMT-1 | CDS | 27178 | 459 | + | 0.535948 | |
Y1039 | unknown | pMT-1 | CDS | 27627 | 474 | + | 0.544304 | |
Y1040 | unknown | pMT-1 | CDS | 28102 | 384 | + | 0.466146 | |
Y1041 | unknown | pMT-1 | CDS | 28560 | 747 | + | 0.535475 | |
Y1042 | unknown | pMT-1 | CDS | 29366 | 318 | + | 0.5 | |
Y1043 | unknown | pMT-1 | CDS | 29764 | 270 | + | 0.551852 | |
Y1044 | unknown | pMT-1 | CDS | 30041 | 4578 | + | 0.566841 | |
Y1045 | lambda minor tail fiber protein M | pMT-1 | CDS | 34660 | 336 | + | 0.488095 | |
Y1046 | lambda minor tail fiber protein L | pMT-1 | CDS | 35052 | 732 | + | 0.52459 | |
Y1047 | lambda tail fiber protein K | pMT-1 | CDS | 35815 | 759 | + | 0.55336 | |
Y1048 | unknown | pMT-1 | CDS | 36561 | 588 | + | 0.527211 | |
Y1049 | pMT-1 | misc_difference | 41703 | 3 | + | 0.666667 | ||
Y1049 | lambda host specificity protein J | pMT-1 | CDS | 37164 | 4638 | + | 0.526304 | |
Y1050 | unknown | pMT-1 | CDS | 41804 | 633 | + | 0.492891 | |
Y1051 | pMT-1 | misc_feature | 45200 | 196 | + | 0.489796 | ||
Y1051 | pMT-1 | misc_feature | 45347 | 49 | + | 0.387755 | ||
Y1051 | pMT-1 | misc_feature | 44273 | 28 | + | 0.428571 | ||
Y1051 | lambda hypothetical | pMT-1 | CDS | 42469 | 2937 | + | 0.49983 | |
Y1052 | unknown | pMT-1 | CDS | 45402 | 213 | + | 0.42723 | |
Y1053 | pMT-1 | misc_feature | 46020 | 20 | + | 0.4 | ||
Y1053 | lambda tail fiber assembly protein G | pMT-1 | CDS | 45707 | 609 | + | 0.456486 | |
Y1054 | IS transposase | pMT-1 | CDS | 46449 | 783 | - | 0.50447 | |
Y1055 | IS transposase | pMT-1 | CDS | 47228 | 1023 | - | 0.527859 | |
Y1056 | unknown | pMT-1 | CDS | 48264 | 354 | - | 0.533898 | |
Y1057 | unknown | pMT-1 | CDS | 48620 | 255 | + | 0.494118 | |
Y1058 | unknown | pMT-1 | CDS | 48652 | 477 | - | 0.513627 | |
Y1059 | unknown | pMT-1 | CDS | 48820 | 342 | + | 0.502924 | |
Y1060 | unknown | pMT-1 | CDS | 49210 | 795 | - | 0.544654 | |
Y1061 | unknown | pMT-1 | CDS | 50257 | 723 | + | 0.388658 | |
Y1062 | transposase | pMT-1 | CDS | 51013 | 1209 | + | 0.496278 | |
Y1063 | transposase | pMT-1 | CDS | 52648 | 1065 | + | 0.515493 | |
Y1064 | unknown | pMT-1 | CDS | 53911 | 324 | - | 0.484568 | |
Y1065 | transposase, incomplete | pMT-1 | CDS | 54281 | 201 | + | 0.517413 | |
Y1066 | unknown | pMT-1 | CDS | 54408 | 396 | - | 0.527778 | |
Y1067 | unknown | pMT-1 | CDS | 54694 | 309 | - | 0.566343 | |
Y1068 | pMT-1 | misc_feature | 55347 | 53 | + | 0.622642 | ||
Y1068 | unknown | pMT-1 | CDS | 55073 | 471 | + | 0.558386 | |
Y1070 | putative endonuclease | pMT-1 | CDS | 57629 | 489 | - | 0.435583 | |
Y1071 | unknown | pMT-1 | CDS | 58841 | 291 | + | 0.5189 | |
Y1072 | putative transposase | pMT-1 | CDS | 59154 | 987 | - | 0.507599 | |
Y1073 | putative resolvase | pMT-1 | CDS | 60161 | 621 | - | 0.495974 | |
Y1074 | unknown | pMT-1 | CDS | 60981 | 327 | - | 0.434251 | |
Y1075 | unknown | pMT-1 | CDS | 61307 | 246 | - | 0.426829 | |
Y1078 | unknown | pMT-1 | CDS | 63916 | 234 | - | 0.384615 | |
Y1079 | unknown | pMT-1 | CDS | 64146 | 147 | - | 0.44898 | |
Y1080 | unknown | pMT-1 | CDS | 64388 | 1398 | + | 0.483548 | |
Y1083 | unknown | pMT-1 | CDS | 65947 | 309 | - | 0.504854 | |
Y1084 | unknown | pMT-1 | CDS | 66501 | 528 | - | 0.566288 | |
Y1085 | unknown | pMT-1 | CDS | 66648 | 678 | + | 0.581121 | |
Y1086 | unknown | pMT-1 | CDS | 67325 | 222 | + | 0.536036 | |
Y1087 | unknown | pMT-1 | CDS | 67485 | 492 | + | 0.558943 | |
Y1088 | unknown | pMT-1 | CDS | 68030 | 780 | + | 0.552564 | |
Y1089 | unknown | pMT-1 | CDS | 68650 | 351 | - | 0.595442 | |
Y1090 | pMT-1 | misc_feature | 69212 | 503 | + | 0.538767 | ||
Y1090 | antirestriction protein | pMT-1 | CDS | 69208 | 507 | + | 0.538462 | |
Y1091 | unknown | pMT-1 | CDS | 70427 | 231 | + | 0.593074 | |
Y1092 | pMT-1 | misc_feature | 72558 | 73 | + | 0.60274 | ||
Y1092 | unknown | pMT-1 | CDS | 70730 | 2010 | + | 0.61393 | |
Y1092 | pMT-1 | misc_feature | 72557 | 74 | + | 0.608108 | ||
Y1092 | pMT-1 | misc_feature | 72558 | 28 | + | 0.571429 | ||
Y1093 | transposase | pMT-1 | CDS | 72863 | 1023 | + | 0.527859 | |
Y1094 | transposase | pMT-1 | CDS | 73885 | 780 | + | 0.503846 | |
Y1095 | unknown | pMT-1 | CDS | 74680 | 1098 | + | 0.516393 | |
Y1101 | unknown | pMT-1 | CDS | 82931 | 1179 | + | 0.478372 | |
Y1102 | unknown | pMT-1 | CDS | 84104 | 387 | - | 0.496124 | |
Y1103 | unknown | pMT-1 | CDS | 84645 | 270 | - | 0.403704 | |
Y1106 | putative DNA polymerase III , alpha subunit | pMT-1 | CDS | 88955 | 3525 | + | 0.544397 | |
Y1107 | unknown | pMT-1 | CDS | 92476 | 444 | + | 0.518018 | |
Y1108 | unknown | pMT-1 | CDS | 92949 | 564 | - | 0.512411 | |
Y1109 | unknown | pMT-1 | CDS | 94015 | 474 | + | 0.495781 | |
Y1110 | putative regulator | pMT-1 | CDS | 94557 | 1080 | + | 0.518519 | |
Y1111 | unknown | pMT-1 | CDS | 95646 | 996 | + | 0.527108 | |
Y1112 | unknown | pMT-1 | CDS | 96641 | 267 | + | 0.546816 | |
Y1113 | putative RecA-like recombinase | pMT-1 | CDS | 96910 | 1077 | + | 0.545033 | |
Y1114 | putative serine protease | pMT-1 | CDS | 98281 | 831 | + | 0.515042 | |
Y1115 | pMT-1 | misc_difference | 99325 | 3 | + | 1 | ||
Y1115 | unknown | pMT-1 | CDS | 99265 | 372 | + | 0.497312 | |
Y1116 | unknown | pMT-1 | CDS | 99620 | 411 | + | 0.559611 | |
Y1117 | unknown | pMT-1 | CDS | 100098 | 276 | + | 0.467391 | |
Y1118 | unknown | pMT-1 | CDS | 100590 | 336 | + | 0.505952 | |
Y1119 | hypothetical regulator | pMT-1 | CDS | 100922 | 216 | + | 0.550926 | |
caf1 | F1 capsule antigen | pMT-1 | CDS | 81734 | 513 | + | 0.42885 | |
caf1 | pMT-1 | misc_difference | 82098 | 1 | + | |||
caf1A | pMT-1 | misc_difference | 80280 | 1 | + | 1 | ||
caf1A | F1 capsule | pMT-1 | CDS | 79152 | 2502 | + | 0.396083 | |
caf1A | pMT-1 | misc_difference | 80326 | 1 | + | 1 | ||
caf1A | pMT-1 | misc_difference | 80247 | 4 | + | 0.75 | ||
caf1A | pMT-1 | misc_difference | 81267 | 1 | + | |||
caf1M | F1 capsule | pMT-1 | CDS | 78318 | 810 | + | 0.408642 | |
caf1M | pMT-1 | misc_difference | 78890 | 1 | + | 1 | ||
caf1R | F1 capsule positive regulator | pMT-1 | CDS | 77118 | 924 | - | 0.333333 | |
cobS | putative porphyrin biosynthetic enzyme | pMT-1 | CDS | 87539 | 1236 | + | 0.526699 | |
cobT | putative porphyrin biosynthetic enzyme | pMT-1 | CDS | 85075 | 2367 | + | 0.52049 | |
parA | partitioning protein | pMT-1 | CDS | 61767 | 1275 | + | 0.448627 | |
parA | pMT-1 | misc_feature | 61836 | 551 | + | 0.441016 | ||
parB | partitioning protein | pMT-1 | CDS | 63038 | 972 | + | 0.447531 | |
repA | replication protein A | pMT-1 | CDS | 717 | 1065 | - | 0.514554 | |
ymt | murine toxin | pMT-1 | CDS | 55788 | 1764 | - | 0.380385 |