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2024-05-05 15:50:01

Gene list

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Organism: Pediococcus pentosaceus, ATCC43200

Number of genes found: 57

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pediococcus pentosaceus, ATCC43200
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pMD136 repeat_region4057 58 + 0.362069
NA pMD136 repeat_region3127 274 + 0.441606
NA unknownSubName: Full=Uncharacterized protein; pMD136 CDS18716 1824 + 0.318531
NA mobilization proteinSubName: Full=Mobilization protein; pMD136 CDS4880 591 + 0.395939
NA pMD136 oriT3761 63 + 0.349206
NA MobC-like proteinSubName: Full=MobC-like protein; pMD136 CDS3858 111 + 0.378378
NA pMD136 stem_loop17768 18 + 0.444444
NA unknownSubName: Full=Orf7; SubName: Full=Uncharacterized protein; pMD136 CDS2897 222 + 0.400901
NA putative ABC transporter membrane-spanning subunitSubName: Full=ABC transporter subunit PenK; SubName: Full=Putative ABC transporter membrane-spanning subunit; pMD136 CDS14074 735 + 0.289796
NA unknownSubName: Full=PenN; SubName: Full=Uncharacterized protein; pMD136 CDS16573 1116 + 0.308244
NA orfX-like proteinSubName: Full=OrfA; SubName: Full=OrfX-like protein; pMD136 CDS7467 519 + 0.34104
NA unknownSubName: Full=Uncharacterized protein; pMD136 CDS2221 210 - 0.27619
NA putative ABC transporter ATP-binding subunitSubName: Full=ABC transporter subunit PenL; SubName: Full=Putative ABC transporter ATP-binding subunit; pMD136 CDS14810 942 + 0.308917
NA unknownSubName: Full=OrfQ; SubName: Full=Uncharacterized protein; pMD136 CDS9328 222 + 0.36036
NA putative ABC transporter membrane-spanning subunitSubName: Full=ABC transporter subunit PenM; SubName: Full=Putative ABC transporter membrane-spanning subunit; pMD136 CDS15744 810 + 0.295062
NA unknownSubName: Full=PenO; SubName: Full=Uncharacterized protein; pMD136 CDS11149 963 + 0.325026
NA DNA invertase-like proteinSubName: Full=DNA invertase-like protein; SubName: Full=OrfU; pMD136 CDS18013 561 + 0.376114
NA yxlE-like proteinSubName: Full=PenH; SubName: Full=YxlE-like protein; pMD136 CDS13011 186 + 0.349462
NA pMD136 stem_loop17694 61 + 0.311475
NA putative ABC transporter ATP-binding subunitSubName: Full=ABC transporter subunit PenJ; SubName: Full=Putative ABC transporter ATP-binding subunit; pMD136 CDS13199 879 + 0.342435
NA unknownSubName: Full=PenD; SubName: Full=Uncharacterized protein; pMD136 CDS12125 861 + 0.329849
NA unknownSubName: Full=PenB; SubName: Full=Uncharacterized protein; pMD136 CDS10109 1026 + 0.283626
NA pMD136 rep_origin5637 285 + 0.312281
NA MobC-like proteinSubName: Full=MobC-like protein; pMD136 CDS3971 222 + 0.468468
NA unknownSubName: Full=Uncharacterized protein; pMD136 CDS8001 696 + 0.385057
NA unknownSubName: Full=Uncharacterized protein; pMD136 CDS9123 225 - 0.373333
NA mobilization proteinSubName: Full=Mobilization protein; SubName: Full=Orf2; pMD136 CDS4174 1161 + 0.429802
NA putative signal proteinSubName: Full=PenA; SubName: Full=Putative signal protein; pMD136 CDS9834 165 + 0.369697
NA Orf5SubName: Full=Orf5; pMD136 CDS16220 420 + 0.319048
NA pMD136 stem_loop10030 43 + 0.348837
NA unknownSubName: Full=Uncharacterized protein; pMD136 CDS3309 153 + 0.457516
NA VirD4-like proteinSubName: Full=Orf6; SubName: Full=VirD4-like protein; pMD136 CDS1251 1647 + 0.395264
orf1 Orf1SubName: Full=Orf1; pMD136 CDS1 19533 + 0.341166
orf1rev Orf1revSubName: Full=Orf1rev; pMD136 CDS1885 189 - 0.31746
orf2 Orf2SubName: Full=Mobilization protein; SubName: Full=Orf2; pMD136 CDS275 1161 + 0.429802
orf3 Orf3SubName: Full=Orf3; pMD136 CDS1002 570 + 0.396491
orf4 Orf4SubName: Full=Orf4; pMD136 CDS15495 648 + 0.333333
orf6 Orf6SubName: Full=Orf6; SubName: Full=VirD4-like protein; pMD136 CDS16866 1647 + 0.395264
orf7 Orf7SubName: Full=Orf7; SubName: Full=Uncharacterized protein; pMD136 CDS18512 222 + 0.400901
orfA OrfASubName: Full=OrfA; SubName: Full=OrfX-like protein; pMD136 CDS3568 519 + 0.34104
orfB OrfBSubName: Full=OrfB; pMD136 CDS4102 696 + 0.385057
orfQ OrfQSubName: Full=OrfQ; SubName: Full=Uncharacterized protein; pMD136 CDS5429 222 + 0.36036
orfU OrfUSubName: Full=DNA invertase-like protein; SubName: Full=OrfU; pMD136 CDS14114 561 + 0.376114
penA PenASubName: Full=PenA; SubName: Full=Putative signal protein; pMD136 CDS5935 165 + 0.369697
penB PenBSubName: Full=PenB; SubName: Full=Uncharacterized protein; pMD136 CDS6210 1026 + 0.283626
penD PenDSubName: Full=PenD; SubName: Full=Uncharacterized protein; pMD136 CDS8226 861 + 0.329849
penH PenHSubName: Full=PenH; SubName: Full=YxlE-like protein; pMD136 CDS9112 186 + 0.349462
penJ ABC transporter subunit PenJSubName: Full=ABC transporter subunit PenJ; SubName: Full=Putative ABC transporter ATP-binding subunit; pMD136 CDS9300 879 + 0.342435
penK ABC transporter subunit PenKSubName: Full=ABC transporter subunit PenK; SubName: Full=Putative ABC transporter membrane-spanning subunit; pMD136 CDS10175 735 + 0.289796
penL ABC transporter subunit PenLSubName: Full=ABC transporter subunit PenL; SubName: Full=Putative ABC transporter ATP-binding subunit; pMD136 CDS10911 942 + 0.308917
penM ABC transporter subunit PenMSubName: Full=ABC transporter subunit PenM; SubName: Full=Putative ABC transporter membrane-spanning subunit; pMD136 CDS11845 810 + 0.295062
penN PenNSubName: Full=PenN; SubName: Full=Uncharacterized protein; pMD136 CDS12674 1116 + 0.308244
penO PenOSubName: Full=PenO; SubName: Full=Uncharacterized protein; pMD136 CDS7250 963 + 0.325026
repB replication proteinSubName: Full=Replication protein; pMD136 CDS5922 1173 + 0.31202
repB pMD136 stem_loop3221 33 + 0.545455
repB pMD136 RBS2007 6 + 0.333333
repB replication proteinSubName: Full=Replication protein; pMD136 CDS2023 1173 + 0.31202