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2024-04-29 14:45:53

Gene list

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Organism: IncN plasmid R46

Number of genes found: 146

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IncN plasmid R46
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA FipSubName: Full=Fip; IncN plasmid R46 CDS14184 627 - 0.539075
NA IncN plasmid R46 repeat_region31669 30 + 0.2
NA IncN plasmid R46 repeat_region26264 124 - 0.741935
NA IncN plasmid R46 repeat_region25338 67 - 0.507463
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS1729 312 - 0.50641
NA IncN plasmid R46 repeat_region27784 264 - 0.560606
NA IncN plasmid R46 repeat_region25767 436 - 0.646789
NA IncN plasmid R46 misc_recomb38061 54 + 0.611111
NA IncN plasmid R46 -35_signal24641 6 - 0.333333
NA IncN plasmid R46 -10_signal27846 6 - 0.166667
NA IncN plasmid R46 repeat_region32767 324 + 0.719136
NA IncN plasmid R46 repeat_region23759 124 + 0.725806
NA IncN plasmid R46 -10_signal23277 6 - 0.166667
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS2353 378 - 0.349206
NA IncN plasmid R46 -10_signal24618 6 - 0.166667
NA IncN plasmid R46 misc_feature36919 876 + 0.5
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS37828 291 + 0.553265
NA hypothetical proteinSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS830 198 - 0.313131
NA IncN plasmid R46 repeat_region24557 338 + 0.627219
NA IncN plasmid R46 -35_signal27869 6 - 0.5
NA IncN plasmid R46 misc_recomb37795 6 + 0.166667
NA IncN plasmid R46 protein_bind27866 33 - 0.30303
NA IncN plasmid R46 repeat_region33835 6418 + 0.561078
NA IncN plasmid R46 repeat_region32510 240 + 0.691667
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS41659 363 - 0.575758
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS43854 324 + 0.611111
NA IncN plasmid R46 RBS24558 4 - 0.75
NA hypothetical proteinSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS1032 642 - 0.490654
NA IncN plasmid R46 misc_feature20199 10 - 0.5
NA IncN plasmid R46 repeat_region23216 429 - 0.638695
NA IncN plasmid R46 -35_signal23300 6 - 0.333333
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS44385 468 + 0.527778
NA IncN plasmid R46 misc_recomb36919 6 + 0.666667
NA IncN plasmid R46 misc_recomb37731 64 + 0.640625
NA unknownSubName: Full=Uncharacterized protein; IncN plasmid R46 CDS39531 489 + 0.660532
NA IncN plasmid R46 oriT20316 1738 - 0.420598
NA IncN plasmid R46 repeat_region31238 28 - 0.285714
NA recombinaseSubName: Full=Recombinase; IncN plasmid R46 CDS50134 657 - 0.494673
NA IncN plasmid R46 repeat_region33835 25 + 0.52
NA IncN plasmid R46 -10_signal25828 6 - 0.166667
NA IncN plasmid R46 misc_feature38115 2138 + 0.59869
NA IncN plasmid R46 repeat_region31551 108 - 0.509259
NA IncN plasmid R46 misc_feature33835 1352 + 0.602071
NA IncN plasmid R46 misc_recomb35187 6 + 0.666667
NA IncN plasmid R46 misc_recomb35131 65 + 0.492308
NA IncN plasmid R46 misc_feature36063 856 + 0.53271
NA IncN plasmid R46 misc_recomb36865 54 + 0.62963
NA IncN plasmid R46 misc_feature38115 390 + 0.441026
NA IncN plasmid R46 -35_signal34935 6 + 0.5
NA IncN plasmid R46 misc_recomb36063 6 + 0.166667
NA IncN plasmid R46 misc_feature37795 320 + 0.546875
NA IncN plasmid R46 -35_signal25851 6 - 0.333333
NA IncN plasmid R46 misc_feature1 36260 + 0.505654
NA IncN plasmid R46 -10_signal34958 6 + 0.166667
NA IncN plasmid R46 misc_feature35187 876 + 0.5
NA IncN plasmid R46 misc_recomb35999 64 + 0.640625
IS26 (IS46) IncN plasmid R46 repeat_region1 820 + 0.52439
IS26(IS46) IncN plasmid R46 repeat_region40612 821 + 0.52497
IS6100 IncN plasmid R46 repeat_region40314 298 + 0.583893
aadA1 aminoglycoside (3' ') adenylyltransferaseRecName: Full=Streptomycin 3-adenylyltransferase; EC=2.7.7.47; IncN plasmid R46 CDS36072 792 + 0.530303
ardA ArdA proteinSubName: Full=ArdA protein; IncN plasmid R46 CDS24042 510 - 0.454902
ardB ArdB proteinSubName: Full=ArdB protein; IncN plasmid R46 CDS27355 426 - 0.478873
ardB IncN plasmid R46 RBS27788 4 - 0.75
ardK IncN plasmid R46 -10_signal31216 6 - 0.333333
ardK IncN plasmid R46 RBS31193 5 - 0.8
ardK ArdK proteinSubName: Full=ArdK protein; IncN plasmid R46 CDS30843 342 - 0.435673
ardK IncN plasmid R46 -35_signal31239 6 - 0.5
ardR ArdR proteinSubName: Full=ArdR protein; IncN plasmid R46 CDS26893 405 - 0.48642
ardR IncN plasmid R46 RBS27305 3 - 0.666667
arsA arsenite acitvated ATPaseSubName: Full=Arsenite acitvated ATPase; IncN plasmid R46 CDS46163 1752 + 0.513128
arsB arsenite transport proteinRecName: Full=Arsenical pump membrane protein; IncN plasmid R46 CDS47964 1290 + 0.523256
arsC arsenate reductaseSubName: Full=Arsenate reductase; IncN plasmid R46 CDS49266 426 + 0.49061
arsD repressor proteinSubName: Full=Repressor protein; IncN plasmid R46 CDS45783 363 + 0.506887
arsR repressor proteinSubName: Full=Repressor protein; IncN plasmid R46 CDS45382 354 + 0.539548
ccgAI CcgAI proteinSubName: Full=CcgAI protein; IncN plasmid R46 CDS23032 180 - 0.5
ccgAI IncN plasmid R46 RBS23217 4 - 0.75
ccgAII IncN plasmid R46 RBS22987 4 - 0.75
ccgAII CcgAII proteinSubName: Full=CcgAII protein; IncN plasmid R46 CDS22657 321 - 0.538941
ccgC IncN plasmid R46 RBS25339 4 - 0.75
ccgC CcgC proteinSubName: Full=CcgC protein; IncN plasmid R46 CDS25049 285 - 0.533333
ccgD CcgD proteinSubName: Full=CcgD protein; IncN plasmid R46 CDS25466 297 - 0.454545
ccgD IncN plasmid R46 RBS25768 4 - 0.75
ccgEIII CcgEIIISubName: Full=CcgEIII; IncN plasmid R46 CDS26644 240 - 0.425
ccgEIII IncN plasmid R46 RBS26891 4 - 0.75
eex entry exclusion proteinSubName: Full=Entry exclusion protein; IncN plasmid R46 CDS8192 228 + 0.473684
intI1 IncN plasmid R46 -35_signal35093 6 - 0.333333
intI1 integraseSubName: Full=IntI; SubName: Full=IntI1; SubName: Full=IntI1 integrase; SubName: Full=Integrase; IncN plasmid R46 CDS34037 1014 - 0.61144
intI1 IncN plasmid R46 -10_signal35077 6 - 0.333333
kikA KikASubName: Full=KikA; IncN plasmid R46 CDS2076 315 - 0.457143
korA KorASubName: Full=KorA; IncN plasmid R46 CDS3903 282 + 0.421986
korB KorBSubName: Full=KorB; IncN plasmid R46 CDS2746 306 - 0.51634
mpr IncN plasmid R46 RBS30027 4 + 0.75
mpr Mpr proteinSubName: Full=Mpr protein; IncN plasmid R46 CDS30037 792 + 0.522727
mucA IncN plasmid R46 -35_signal28134 6 + 0.5
mucA MucA proteinSubName: Full=MucA protein; IncN plasmid R46 CDS28193 441 + 0.519274
mucA IncN plasmid R46 RBS28182 6 + 0.5
mucA IncN plasmid R46 -10_signal28158 6 + 0.333333
mucA IncN plasmid R46 protein_bind28160 16 + 0.25
mucB MucB proteinSubName: Full=MucB protein; IncN plasmid R46 CDS28621 1266 + 0.534755
nuc endonucleaseSubName: Full=Endonuclease; IncN plasmid R46 CDS13481 534 + 0.516854
orfD OrfDSubName: Full=OrfD; SubName: Full=Uncharacterized protein; IncN plasmid R46 CDS22202 345 + 0.562319
orfD IncN plasmid R46 RBS22191 5 + 0.8
oxa2 OXA-2 beta-lactamase precursorSubName: Full=Beta-lactamase OXA-2; SubName: Full=OXA-2 beta-lactamase; IncN plasmid R46 CDS35208 828 + 0.5
oxa2 OXA-2 beta-lactamase precursorSubName: Full=Beta-lactamase OXA-2; SubName: Full=OXA-2 beta-lactamase; IncN plasmid R46 CDS36940 828 + 0.5
qacEdelta1 IncN plasmid R46 -10_signal38159 6 + 0.333333
qacEdelta1 IncN plasmid R46 -35_signal38136 6 + 0.5
qacEdelta1 QacEdelta1SubName: Full=Ethidium bromide resistance protein; SubName: Full=Multidrug efflux protein; SubName: Full=QacEdelta 1 protein; SubName: Full=QacEdelta1; SubName: Full=QacEdelta1 multidrug exporter; SubName: Full=Quaternary ammonium compound and disinfectant protein; SubName: Full=Quaternary ammonium compound resistance protein; SubName: Full=Quaternary ammonium compound-resistance protein; IncN plasmid R46 CDS38223 348 + 0.5
repA IncN plasmid R46 RBS31732 3 + 0.666667
repA RepA proteinSubName: Full=RepA protein; IncN plasmid R46 CDS31743 720 + 0.440278
repA IncN plasmid R46 -35_signal31690 6 + 0.333333
repA IncN plasmid R46 -10_signal31713 6 + 0.166667
resP resolvaseSubName: Full=Resolvase; IncN plasmid R46 CDS33148 597 - 0.467337
resP IncN plasmid R46 RBS33753 3 - 0.666667
stbA IncN plasmid R46 RBS20497 4 + 0.75
stbA StbASubName: Full=StbA; IncN plasmid R46 CDS20506 420 + 0.428571
stbABC/orfD operon IncN plasmid R46 -10_signal20402 6 + 0.166667
stbABC/orfD operon IncN plasmid R46 -35_signal20379 6 + 0.333333
stbB StdBSubName: Full=StbB; SubName: Full=StdB; IncN plasmid R46 CDS20934 717 + 0.415621
stbB IncN plasmid R46 RBS20924 4 + 0.75
stbC IncN plasmid R46 RBS21642 4 + 0.75
stbC StbCSubName: Full=StbC; IncN plasmid R46 CDS21652 369 + 0.476965
sul1 Sul1 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; SubName: Full=Dihydropteroate synthase 1; SubName: Full=Dihydropteroate synthase type 1; SubName: Full=Sul; SubName: Full=Sul1 dihydropteroate synthase; SubName: Full=Sul1 protein; SubName: Full=Sul1, dihydropteroate synthase; SubName: Full=Sulfonamide resistance protein; IncN plasmid R46 CDS38564 840 + 0.616667
tetA tetracycline resistance proteinSubName: Full=Tetracycline resistance protein; SubName: Full=Tetracycline resistance protein class C; IncN plasmid R46 CDS42760 1176 + 0.613095
tetR tetracycline repressor proteinSubName: Full=Tetracycline repressor protein; SubName: Full=Tetracycline resistance regulatory protein; IncN plasmid R46 CDS42008 660 - 0.587879
tnpA transposaseSubName: Full=IS26 transposase; SubName: Full=TnpA26; SubName: Full=Transposase; SubName: Full=Transposase TnpA; SubName: Full=Transposase of IS26; IncN plasmid R46 CDS40664 705 - 0.531915
tnpA IncN plasmid R46 RBS41375 4 - 0.75
tnpA IncN plasmid R46 -10_signal28 6 + 0.166667
tnpA transposase TnpASubName: Full=IS26 transposase; SubName: Full=TnpA26; SubName: Full=Transposase; SubName: Full=Transposase TnpA; SubName: Full=Transposase of IS26; IncN plasmid R46 CDS64 705 + 0.531915
tnpA IncN plasmid R46 -10_signal41399 6 - 0.166667
tnpA IncN plasmid R46 RBS54 4 + 0.75
tnpA IncN plasmid R46 -35_signal8 6 + 0.333333
tnpA IncN plasmid R46 -35_signal41419 6 - 0.333333
traA TraASubName: Full=TraA; IncN plasmid R46 CDS4537 312 + 0.432692
traB TraBSubName: Full=TraB; IncN plasmid R46 CDS4853 2601 + 0.497117
traC TraCSubName: Full=TraC; IncN plasmid R46 CDS7471 714 + 0.512605
traD TraDSubName: Full=TraD; IncN plasmid R46 CDS8435 1041 + 0.529299
traE TraESubName: Full=TraE; IncN plasmid R46 CDS9694 699 + 0.505007
traF TraFSubName: Full=TraF; IncN plasmid R46 CDS11287 1161 + 0.540913
traG TraGSubName: Full=TraG; IncN plasmid R46 CDS12486 996 + 0.5
traI TraISubName: Full=TraI; IncN plasmid R46 CDS14810 3237 - 0.526413
traJ TraJSubName: Full=TraJ; IncN plasmid R46 CDS18046 1530 - 0.439869
traK TraKSubName: Full=TraK; IncN plasmid R46 CDS19577 417 - 0.496403
traL TraLSubName: Full=TraL; IncN plasmid R46 CDS3160 735 + 0.507483
traM TraMSubName: Full=TraM; IncN plasmid R46 CDS4194 294 + 0.486395
traN TraNSubName: Full=TraN; IncN plasmid R46 CDS9558 147 + 0.510204
traO TraOSubName: Full=TraO; IncN plasmid R46 CDS10403 885 + 0.501695