TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-03 13:47:50

Gene list

Applied filters:

Organism: Plasmid R100

Number of genes found: 166

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Plasmid R100
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA R100 repeat_region47839 586 + 0.593857
NA R100 repeat_unit25651 11 - 0.363636
NA R100 repeat_unit25640 11 - 0.545455
NA R100 repeat_unit15667 25 - 0.52
NA R100 repeat_unit7398 22 + 0.590909
NA R100 repeat_region36132 9147 + 0.399475
NA R100 repeat_unit50563 18 + 0.444444
NA R100 repeat_unit25568 11 - 0.454545
NA R100 repeat_unit25618 11 - 0.272727
NA R100 repeat_unit25546 11 - 0.363636
NA R100 misc_signal90072 23 - 0.391304
NA R100 repeat_unit36132 23 + 0.347826
NA R100 repeat_region59 19672 + 0.603497
NA R100 repeat_unit25535 11 - 0.454545
NA R100 repeat_unit50712 46 + 0.304348
NA R100 repeat_unit25629 11 - 0.272727
NA R100 repeat_unit43950 23 + 0.434783
NA R100 repeat_unit19693 38 - 0.473684
NA R100 repeat_unit25662 11 - 0.363636
NA R100 repeat_unit7370 26 + 0.384615
NA R100 repeat_region33266 586 + 0.593857
NA R100 repeat_unit94269 13 - 0.461538
NA R100 repeat_unit50749 27 + 0.703704
NA R100 repeat_region30091 439 + 0.603645
NA R100 repeat_unit8989 23 - 0.521739
NA R100 repeat_unit50789 31 + 0.516129
NA R100 repeat_unit11430 26 - 0.423077
NA R100 repeat_unit50668 31 + 0.548387
NA R100 repeat_unit25557 11 - 0.363636
NA R100 repeat_unit93514 23 + 0.478261
NA R100 misc_signal90207 22 - 0.227273
NA R100 repeat_region4692 11000 + 0.581545
NA R100 repeat_unit21970 23 - 0.347826
NA R100 repeat_unit45256 23 - 0.347826
NA R100 repeat_unit50586 44 + 0.25
NA R100 repeat_unit21225 23 + 0.478261
NA R100 repeat_unit37438 23 - 0.434783
NA R100 repeat_unit59 38 + 0.5
NA R100 repeat_unit50626 35 + 0.114286
NA R100 repeat_unit50700 29 + 0.310345
NA R100 repeat_unit4692 25 + 0.44
NA R100 repeat_unit25524 11 - 0.272727
32 SubName: Full=32 protein; R100 CDS48847 822 + 0.437956
IS1326 R100 repeat_region7370 4086 + 0.538179
IS1353 R100 repeat_region7398 1614 + 0.563817
IS1a R100 repeat_region21225 768 + 0.536458
IS1b R100 repeat_region93514 768 + 0.536458
X SubName: Full=X protein; R100 CDS49965 510 - 0.458824
aadA1 streptomycin adenyltransferaseSubName: Full=Streptomycin adenyltransferase; R100 CDS13536 1011 - 0.530168
cat chloramphenycol acetyltransferaseRecName: Full=Chloramphenicol acetyltransferase; EC=2.3.1.28; R100 CDS20342 660 - 0.44697
finO fertility inhibition proteinSubName: Full=Fertility inhibition protein; R100 CDS85524 561 + 0.54902
finP R100 misc_RNA51396 2778 - 0.430526
hok post-segregation killing proteinSubName: Full=Post-segregation killing protein; R100 CDS47367 159 + 0.477987
inc R100 misc_RNA88641 93 - 0.462366
insA IS1 transposition proteinSubName: Full=IS1 transposition protein; R100 CDS93569 276 + 0.536232
insA IS1 transposition proteinSubName: Full=IS1 transposition protein; R100 CDS21280 276 + 0.536232
insB IS1 transposition proteinSubName: Full=IS1 transposition protein; R100 CDS21474 504 + 0.551587
insB IS1 transposition proteinSubName: Full=IS1 transposition protein; R100 CDS93763 504 + 0.551587
intR integrase for In2SubName: Full=Integrase for In2; R100 CDS14476 1014 + 0.612426
istA possible transposase of IS1326SubName: Full=Possible transposase of IS1326; R100 CDS9102 1515 + 0.541914
istB NTP-binding proteinSubName: Full=NTP-binding protein; R100 CDS10603 786 + 0.501272
merA mercuric (ion) reductaseSubName: Full=Mercuric (Ion) reductase; R100 CDS1747 1695 + 0.651917
merC mercuric transport proteinSubName: Full=Mercuric transport protein; R100 CDS1234 462 + 0.65368
merD SubName: Full=MerD protein; R100 CDS3459 363 + 0.69697
merP mercuric transport proteinSubName: Full=Mercuric transport protein; R100 CDS962 276 + 0.626812
merR regulatory protein of mer operonSubName: Full=Regulatory protein of mer operon; R100 CDS92 435 - 0.595402
merT mercuric transport proteinSubName: Full=Mercuric transport protein; R100 CDS598 351 + 0.612536
mok modulator of Hok proteinSubName: Full=Modulator of Hok protein; R100 CDS47309 213 + 0.492958
pemI plasmid stable inheritance proteinSubName: Full=Plasmid stable inheritance protein; R100 CDS91354 258 + 0.534884
pemK plasmid stable inheritance proteinRecName: Full=mRNA interferase; EC=3.1.-.-; R100 CDS91544 402 + 0.552239
psiA plasmid SOS inhibition proteinSubName: Full=Plasmid SOS inhibition protein; R100 CDS46368 720 + 0.6125
psiB plasmid SOS inhibition proteinSubName: Full=Plasmid SOS inhibition protein; R100 CDS45937 435 + 0.574713
qacEdelta1 putative ethidium bromide resistant proteinSubName: Full=Putative ethidium bromide resistant protein; R100 CDS13025 348 - 0.5
repA1 replication initiation proteinSubName: Full=Replication initiation protein; R100 CDS88812 858 + 0.572261
repA2 negative regulator of repA1 expressionSubName: Full=Negative regulator of repA1 expression; R100 CDS88253 255 + 0.435294
repA4 SubName: Full=RepA4 protein; R100 CDS90032 387 + 0.586563
repA6 regulatory reading frameRecName: Full=Positive regulator of RepFIC repA1 expression; AltName: Full=RepA1 leader peptide; R100 CDS88745 75 + 0.493333
sok R100 misc_RNA47256 66 - 0.439394
ssb single strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; R100 CDS33830 567 + 0.567901
stbA plasmid stable inheritance proteinSubName: Full=Plasmid stable inheritance protein; R100 CDS24545 963 - 0.390447
stbB plasmid stable inheritance proteinSubName: Full=Plasmid stable inheritance protein; R100 CDS24192 354 - 0.415254
sul1 dihydropteroate synthetase typeISubName: Full=Dihydropteroate synthetase typeI; R100 CDS12192 867 - 0.620531
tetA tetracycline resistance proteinSubName: Full=Tetracycline resistance protein; R100 CDS41538 1206 + 0.432836
tetC SubName: Full=TetC protein; R100 CDS42856 669 - 0.325859
tetD SubName: Full=TetD protein; R100 CDS43537 417 + 0.359712
tetR repressor of tet operonSubName: Full=Repressor of tet operon; R100 CDS40833 624 - 0.402244
tir SubName: Full=Tir protein; R100 CDS90608 654 + 0.521407
tniA transposase of In21SubName: Full=Transposase of In21; R100 CDS4833 1680 + 0.647024
tniBdelta1 NTP-binding proteinSubName: Full=NTP-binding protein; R100 CDS6515 861 + 0.656214
tnpA transposase for Tn21SubName: Full=Transposase for Tn21; R100 CDS16731 2967 + 0.633974
tnpM Tn21 modulator proteinSubName: Full=Tn21 modulator protein; R100 CDS15692 351 + 0.635328
tnpR resolvase for Tn21SubName: Full=Resolvase for Tn21; R100 CDS16168 561 + 0.57754
traA prepropilinSubName: Full=Prepropilin; R100 CDS52535 360 + 0.475
traB SubName: Full=TraB protein; R100 CDS54523 1452 + 0.578512
traC SubName: Full=TraC protein; R100 CDS59376 2631 + 0.54314
traD SubName: Full=TraD protein; R100 CDS76250 2217 + 0.524583
traE SubName: Full=TraE protein; R100 CDS53242 567 + 0.462081
traF SubName: Full=TraF protein; R100 CDS67095 762 + 0.513123
traG SubName: Full=TraG protein; R100 CDS71156 2823 + 0.511867
traH SubName: Full=TraH protein; R100 CDS69777 1383 + 0.520607
traI DNA helicase ISubName: Full=DNA helicase I; R100 CDS78466 5271 + 0.599507
traJ positive rugulator of tra operonSubName: Full=Positive rugulator of tra operon; R100 CDS51467 672 + 0.31994
traK RecName: Full=TraK lipoprotein; Flags: Precursor; R100 CDS53795 729 + 0.565158
traL SubName: Full=TraL protein; R100 CDS52909 312 + 0.474359
traM RecName: Full=Relaxosome protein TraM; R100 CDS50890 384 + 0.388021
traN SubName: Full=TraN protein; R100 CDS64986 903 + 0.528239
traP SubName: Full=TraP protein; R100 CDS55943 588 + 0.510204
traQ possible cleavage protein of preproplinSubName: Full=Possible cleavage protein of preproplin; R100 CDS68333 285 + 0.519298
traR SubName: Full=TraR protein; R100 CDS57484 222 + 0.454955
traS possible surface exclusion proteinSubName: Full=Possible surface exclusion protein; R100 CDS74000 480 + 0.372917
traT surface exclusion proteinSubName: Full=Surface exclusion protein; R100 CDS74528 732 + 0.494536
traU SubName: Full=TraU protein; R100 CDS63015 993 + 0.545821
traV SubName: Full=TraV protein; R100 CDS56834 516 + 0.523256
traW SubName: Full=TraW protein; R100 CDS62386 633 + 0.597156
traX possible pilin acetylaseSubName: Full=Possible pilin acetylase; R100 CDS83756 747 + 0.576975
traY component of oriT-specific nickaseSubName: Full=Component of oriT-specific nickase; R100 CDS52275 228 + 0.412281
traZ SubName: Full=TraZ protein; R100 CDS65901 936 + 0.530983
trbA SubName: Full=TrbA protein; R100 CDS67870 345 + 0.405797
trbB SubName: Full=TrbB protein; R100 CDS68604 546 + 0.556777
trbC SubName: Full=TrbC protein; R100 CDS64351 639 + 0.546166
trbD SubName: Full=TrbD protein; R100 CDS56469 369 + 0.417344
trbE SubName: Full=TrbE protein; R100 CDS66860 261 + 0.40613
trbF SubName: Full=TrbF protein; R100 CDS69374 426 + 0.375587
trbI SubName: Full=TrbI protein; R100 CDS62003 387 + 0.573643
trbJ SubName: Full=TrbJ protein; R100 CDS69079 348 + 0.448276
yadA SubName: Full=YadA protein; R100 CDS3818 237 + 0.691983
yaeA SubName: Full=YaeA protein; R100 CDS4051 708 + 0.635593
yahA possible transposase of IS1353SubName: Full=Possible transposase of IS1353; R100 CDS7426 1545 - 0.565696
ybbA SubName: Full=YbbA protein; R100 CDS11564 501 - 0.650699
ybjA SubName: Full=YbjA protein; R100 CDS19764 378 + 0.484127
ycdA SubName: Full=YcdA protein; R100 CDS23523 237 - 0.413502
ycdB SubName: Full=YcdB protein; R100 CDS23788 282 + 0.365248
ycgA SubName: Full=YcgA protein; R100 CDS26060 648 + 0.58179
ycgB SubName: Full=YcgB protein; R100 CDS26943 435 + 0.574713
ychA SubName: Full=YchA protein; R100 CDS27377 828 + 0.611111
yciA SubName: Full=YciA protein; R100 CDS28077 573 + 0.623037
yciB SubName: Full=YciB protein; R100 CDS28622 426 + 0.544601
ycjA SubName: Full=YcjA protein; R100 CDS29094 423 + 0.553191
ycjB SubName: Full=YcjB protein; R100 CDS29568 354 + 0.570621
ydaA SubName: Full=YdaA protein; R100 CDS30084 252 + 0.65873
ydaB SubName: Full=YdaB protein; R100 CDS30761 231 + 0.571429
ydbA SubName: Full=YdbA protein; R100 CDS31043 1362 + 0.572687
ydcA SubName: Full=YdcA protein; R100 CDS32451 564 + 0.579787
yddA SubName: Full=YddA protein; R100 CDS33100 468 - 0.58547
ydeA SubName: Full=YdeA protein; R100 CDS34448 240 + 0.5125
ydeB SubName: Full=YdeB protein; R100 CDS34748 1422 + 0.586498
ydgA transposase of Tn10SubName: Full=Transposase of Tn10; R100 CDS36239 1209 + 0.450786
ydhA SubName: Full=YdhA protein; R100 CDS37813 1206 - 0.394693
ydjA SubName: Full=YdjA protein; R100 CDS39462 321 + 0.34891
ydjB SubName: Full=YdjB protein; R100 CDS39673 489 + 0.376278
yeaA SubName: Full=YeaA protein; R100 CDS40169 687 + 0.416303
yedA transposase of Tn10SubName: Full=Transposase of Tn10; R100 CDS43963 1209 - 0.449132
yefA SubName: Full=YefA protein; R100 CDS45293 576 + 0.579861
yehA SubName: Full=YehA protein; R100 CDS47763 378 - 0.600529
yeiA SubName: Full=YeiA protein; R100 CDS48440 297 + 0.474747
yfhA SubName: Full=YfhA protein; R100 CDS57698 414 + 0.442029
yfiA SubName: Full=YfiA protein; R100 CDS58104 474 + 0.453586
yfiB SubName: Full=YfiB protein; R100 CDS58657 219 + 0.43379
yfiC SubName: Full=YfiC protein; R100 CDS58903 348 + 0.37069
ygeA SubName: Full=YgeA protein; R100 CDS64031 312 + 0.349359
yhfA SubName: Full=YhfA protein; R100 CDS75417 783 + 0.461047
yieA SubName: Full=YieA protein; R100 CDS84561 861 + 0.440186
yigA SubName: Full=YigA protein; R100 CDS86213 213 + 0.661972
yigB SubName: Full=YigB protein; R100 CDS86669 462 + 0.484848
yihA SubName: Full=YihA protein; R100 CDS87423 591 + 0.499154
yjcA SubName: Full=YjcA protein; R100 CDS92230 1311 + 0.345538