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2024-05-06 14:23:29

Gene list

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Organism: Listeria innocua, Clip11262

Number of genes found: 160

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Listeria innocua, Clip11262
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
pli0001 SubName: Full=Pli0001 protein; pLI100 CDS40 495 - 0.387879
pli0002 pLI100 RBS815 6 - 0.666667
pli0002 SubName: Full=Pli0002 protein; pLI100 CDS648 162 - 0.364198
pli0003 pLI100 RBS2054 6 - 0.5
pli0003 SubName: Full=Pli0003 protein; pLI100 CDS820 1227 - 0.364303
pli0004 SubName: Full=Pli0004 protein; pLI100 CDS2131 2271 - 0.384852
pli0004 pLI100 RBS4409 6 - 0.666667
pli0005 SubName: Full=Pli0005 protein; pLI100 CDS4405 399 - 0.348371
pli0005 pLI100 RBS4812 6 - 0.5
pli0006 SubName: Full=Pli0006 protein; pLI100 CDS4977 336 + 0.345238
pli0006 pLI100 terminator5317 27 + 0.666667
pli0006 pLI100 RBS4964 6 + 0.666667
pli0007 pLI100 terminator5321 20 - 0.75
pli0007 SubName: Full=Pli0007 protein; pLI100 CDS5350 531 - 0.355932
pli0007 pLI100 RBS5891 6 - 0.5
pli0008 pLI100 terminator5971 18 - 0.5
pli0008 SubName: Full=Pli0008 protein; pLI100 CDS5994 765 - 0.415686
pli0008 pLI100 RBS6767 6 - 0.666667
pli0009 pLI100 RBS8498 6 - 0.833333
pli0009 SubName: Full=Pli0009 protein; pLI100 CDS7151 1341 - 0.36689
pli0010 pLI100 RBS8932 6 - 0.666667
pli0010 SubName: Full=Pli0010 protein; pLI100 CDS8484 441 - 0.333333
pli0011 SubName: Full=Pli0011 protein; pLI100 CDS8936 240 - 0.370833
pli0011 pLI100 RBS9188 6 - 0.666667
pli0012 TransposaseSubName: Full=Transposase; pLI100 CDS9632 681 + 0.374449
pli0012 pLI100 RBS9619 6 + 0.666667
pli0013 pLI100 RBS10986 6 - 0.5
pli0013 SubName: Full=Pli0013 protein; pLI100 CDS10455 522 - 0.285441
pli0014 SubName: Full=Pli0014 protein; pLI100 CDS10991 576 - 0.270833
pli0014 pLI100 RBS11575 7 - 0.571429
pli0015 SubName: Full=Pli0015 protein; pLI100 CDS11582 984 - 0.331301
pli0015 pLI100 RBS12578 6 - 0.5
pli0016 pLI100 pseudo12827 231 + 0.406926
pli0017 SubName: Full=Pli0017 protein; pLI100 CDS13316 339 + 0.238938
pli0017 pLI100 terminator13684 37 + 0.459459
pli0018 transposase (truncated) pLI100 pseudo13975 435 + 0.4
pli0019 Transposase, truncated pLI100 pseudo14440 258 + 0.321705
pli0020 pLI100 terminator14623 28 - 0.428571
pli0020 pLI100 RBS15216 6 - 0.666667
pli0020 SubName: Full=Pli0020 protein; pLI100 CDS14724 483 - 0.36646
pli0021 SubName: Full=Pli0021 protein; pLI100 CDS15481 4710 - 0.346921
pli0021 pLI100 RBS20199 6 - 0.666667
pli0021 pLI100 terminator15397 37 - 0.459459
pli0022 pLI100 RBS20740 6 - 0.833333
pli0022 SubName: Full=Pli0022 protein; pLI100 CDS20187 546 - 0.313187
pli0023 SubName: Full=Pli0023 protein; pLI100 CDS20732 1161 - 0.360034
pli0023 pLI100 RBS21901 6 - 0.666667
pli0024 pLI100 RBS22840 6 - 0.666667
pli0024 SubName: Full=Pli0024 protein; SubName: Full=Pli0071 protein; pLI100 CDS22150 681 - 0.35536
pli0025 SubName: Full=Pli0025 protein; pLI100 CDS23026 294 - 0.391156
pli0025 pLI100 RBS23329 6 - 0.5
pli0026 SubName: Full=Pli0026 protein; pLI100 CDS23377 276 + 0.315217
pli0027 pLI100 RBS23671 6 + 0.666667
pli0027 SubName: Full=Pli0027 protein; pLI100 CDS23688 3006 + 0.328343
pli0027 pLI100 terminator26775 26 + 0.576923
pli0028 pLI100 RBS27415 6 - 0.666667
pli0028 TransposaseSubName: Full=Transposase; pLI100 CDS26727 681 - 0.372981
pli0029 SubName: Full=Pli0029 protein; pLI100 CDS27445 1068 - 0.330524
pli0029 pLI100 RBS28521 6 - 0.666667
pli0030 pLI100 RBS29079 6 - 0.666667
pli0030 SubName: Full=Pli0030 protein; pLI100 CDS28515 558 - 0.292115
pli0031 pLI100 RBS29255 6 - 0.5
pli0031 SubName: Full=Pli0031 protein; pLI100 CDS29073 174 - 0.327586
pli0032 pLI100 RBS29352 6 + 0.666667
pli0032 TransposaseSubName: Full=Transposase; pLI100 CDS29365 681 + 0.372981
pli0033 Pseudogene, similar to C-terminal part of ATPase pLI100 pseudo30102 228 + 0.394737
pli0034 pLI100 RBS30407 6 + 0.666667
pli0034 SubName: Full=Pli0034 protein; pLI100 CDS30420 294 + 0.312925
pli0035 SubName: Full=Pli0035 protein; pLI100 CDS30715 372 + 0.384409
pli0035 pLI100 RBS30701 6 + 0.5
pli0035 pLI100 terminator31102 26 + 0.5
pli0036 pLI100 RBS31206 6 + 0.666667
pli0036 SubName: Full=Pli0036 protein; pLI100 CDS31220 366 + 0.36612
pli0037 pLI100 RBS31606 6 + 0.666667
pli0037 SubName: Full=Pli0037 protein; pLI100 CDS31621 1743 + 0.380952
pli0038 SubName: Full=Pli0038 protein; pLI100 CDS33450 1059 + 0.352219
pli0038 pLI100 RBS33435 6 + 0.666667
pli0039 SubName: Full=Pli0039 protein; pLI100 CDS34562 1047 + 0.34766
pli0039 pLI100 RBS34548 6 + 0.5
pli0040 pLI100 RBS35616 6 + 0.5
pli0040 SubName: Full=Pli0040 protein; pLI100 CDS35629 1674 + 0.376344
pli0041 SubName: Full=Pli0041 protein; pLI100 CDS37584 663 + 0.371041
pli0042 SubName: Full=Pli0042 protein; pLI100 CDS38284 123 + 0.365854
pli0042 pLI100 RBS38271 6 + 0.666667
pli0042 pLI100 terminator38488 26 + 0.576923
pli0043 pLI100 RBS39128 6 - 0.666667
pli0043 TransposaseSubName: Full=Transposase; pLI100 CDS38440 681 - 0.372981
pli0044 pLI100 RBS39298 6 + 0.666667
pli0044 SubName: Full=Pli0044 protein; pLI100 CDS39312 1365 + 0.404396
pli0045 pLI100 RBS41799 6 - 0.833333
pli0045 Pseudogene, similar to glycine-betaine binding (ABC transporter) pLI100 CDS40922 870 - 0.413793
pli0045 pLI100 terminator40835 38 - 0.421053
pli0046 SubName: Full=Pli0046 protein; pLI100 CDS42100 372 + 0.306452
pli0047 SubName: Full=Pli0047 protein; pLI100 CDS42662 765 + 0.4
pli0048 SubName: Full=Pli0048 protein; pLI100 CDS43889 1884 + 0.453291
pli0048 pLI100 RBS43876 6 + 0.5
pli0049 TransposaseSubName: Full=Transposase; pLI100 CDS45892 681 - 0.38326
pli0049 pLI100 RBS46581 6 - 0.666667
pli0050 pLI100 RBS47605 6 + 0.333333
pli0050 SubName: Full=Pli0050 protein; pLI100 CDS47618 2667 + 0.347207
pli0051 pLI100 RBS50262 6 + 0.666667
pli0051 SubName: Full=Pli0051 protein; pLI100 CDS50277 723 + 0.370678
pli0052 RecName: Full=Potassium-transporting ATPase A chain; EC=3.6.3.12; AltName: Full=ATP phosphohydrolase [potassium-transporting] A chain; AltName: Full=Potassium-binding and translocating subunit A; AltName: Full=Potassium-translocating ATPase A chain; pLI100 CDS51307 1722 + 0.351916
pli0052 pLI100 RBS51292 6 + 0.666667
pli0053 pLI100 RBS53028 6 + 0.666667
pli0053 RecName: Full=Potassium-transporting ATPase B chain 2; EC=3.6.3.12; AltName: Full=ATP phosphohydrolase [potassium-transporting] B chain 2; AltName: Full=Potassium-binding and translocating subunit B 2; AltName: Full=Potassium-translocating ATPase B chain 2; pLI100 CDS53042 2061 + 0.370209
pli0054 pLI100 RBS55141 6 + 0.5
pli0054 SubName: Full=Pli0054 protein; pLI100 CDS55152 327 + 0.284404
pli0055 pLI100 RBS55483 6 + 0.666667
pli0055 RecName: Full=Potassium-transporting ATPase C chain; EC=3.6.3.12; AltName: Full=ATP phosphohydrolase [potassium-transporting] C chain; AltName: Full=Potassium-binding and translocating subunit C; AltName: Full=Potassium-translocating ATPase C chain; pLI100 CDS55501 639 + 0.338028
pli0056 pLI100 RBS57405 6 - 0.5
pli0056 SubName: Full=Pli0056 protein; pLI100 CDS56844 552 - 0.402174
pli0057 pLI100 RBS58491 6 - 0.666667
pli0057 SubName: Full=Pli0057 protein; pLI100 CDS57626 858 - 0.308858
pli0058 pLI100 RBS59920 6 - 0.666667
pli0058 SubName: Full=Pli0058 protein; pLI100 CDS58476 1437 - 0.331246
pli0059 pLI100 RBS60058 6 + 0.5
pli0059 SubName: Full=Pli0059 protein; pLI100 CDS60071 600 + 0.348333
pli0060 pLI100 RBS60932 6 + 0.333333
pli0060 RecName: Full=Cadmium resistance transcriptional regulatory protein CadC; AltName: Full=Cadmium efflux system accessory protein; pLI100 CDS60944 360 + 0.313889
pli0061 SubName: Full=Pli0061 protein; pLI100 CDS61300 2118 + 0.371105
pli0061 pLI100 RBS61287 6 + 0.5
pli0061 pLI100 terminator63432 26 + 0.461538
pli0062 pLI100 RBS64515 7 - 0.571429
pli0062 SubName: Full=Pli0062 protein; pLI100 CDS64062 444 - 0.34009
pli0063 pLI100 RBS64610 6 + 0.666667
pli0063 SubName: Full=Pli0063 protein; pLI100 CDS64625 681 + 0.353891
pli0064 SubName: Full=Pli0064 protein; pLI100 CDS65525 906 + 0.338852
pli0064 pLI100 RBS65513 6 + 0.666667
pli0065 pLI100 terminator66942 21 + 0.52381
pli0065 SubName: Full=Pli0065 protein; pLI100 CDS66452 453 + 0.295806
pli0065 pLI100 RBS66434 6 + 0.5
pli0066 SubName: Full=Pli0066 protein; pLI100 CDS67066 345 + 0.411594
pli0066 pLI100 RBS67052 6 + 0.666667
pli0067 SubName: Full=Pli0067 protein; pLI100 CDS67398 1281 + 0.425449
pli0067 pLI100 RBS67380 6 + 0.5
pli0068 SubName: Full=Pli0068 protein; pLI100 CDS69035 333 - 0.342342
pli0068 pLI100 terminator69002 28 - 0.285714
pli0068 pLI100 RBS69376 6 - 0.5
pli0069 SubName: Full=Pli0069 protein; pLI100 CDS69360 882 - 0.309524
pli0069 pLI100 RBS70249 6 - 0.666667
pli0070 SubName: Full=Pli0070 protein; pLI100 CDS70869 1650 + 0.430909
pli0070 pLI100 RBS70855 6 + 0.666667
pli0071 pLI100 RBS72823 6 + 0.666667
pli0071 SubName: Full=Pli0024 protein; SubName: Full=Pli0071 protein; pLI100 CDS72838 681 + 0.35536
pli0072 SubName: Full=Pli0072 protein; pLI100 CDS73532 825 + 0.380606
pli0073 pLI100 RBS75917 6 - 0.5
pli0073 SubName: Full=Pli0073 protein; pLI100 CDS74919 990 - 0.380808
pli0074 SubName: Full=Pli0074 protein; pLI100 CDS75915 261 - 0.383142
pli0074 pLI100 RBS76185 7 - 0.714286
pli0075 pLI100 RBS76840 6 - 0.666667
pli0075 SubName: Full=Pli0075 protein; pLI100 CDS76285 546 - 0.340659
pli0076 TransposaseSubName: Full=Transposase; pLI100 CDS77849 810 - 0.361728
pli0077 pLI100 RBS79002 6 - 0.5
pli0077 SubName: Full=Pli0077 protein; pLI100 CDS78712 282 - 0.351064
pli0078 pLI100 pseudo79075 1182 + 0.406091
pli0079 SubName: Full=Pli0079 protein; pLI100 CDS80403 1155 + 0.360173
pli0079 pLI100 RBS80387 6 + 0.666667
pli0080 SubName: Full=Pli0080 protein; pLI100 CDS81574 294 + 0.323129
pli0080 pLI100 RBS81557 6 + 0.5