Gene list
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Organism: Listeria innocua, Clip11262
Number of genes found: 160
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Listeria innocua, Clip11262 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
pli0001 | pLI100 | CDS | 40 | 495 | - | 0.387879 | ||
pli0002 | pLI100 | CDS | 648 | 162 | - | 0.364198 | ||
pli0002 | pLI100 | RBS | 815 | 6 | - | 0.666667 | ||
pli0003 | pLI100 | RBS | 2054 | 6 | - | 0.5 | ||
pli0003 | pLI100 | CDS | 820 | 1227 | - | 0.364303 | ||
pli0004 | pLI100 | RBS | 4409 | 6 | - | 0.666667 | ||
pli0004 | pLI100 | CDS | 2131 | 2271 | - | 0.384852 | ||
pli0005 | pLI100 | CDS | 4405 | 399 | - | 0.348371 | ||
pli0005 | pLI100 | RBS | 4812 | 6 | - | 0.5 | ||
pli0006 | pLI100 | RBS | 4964 | 6 | + | 0.666667 | ||
pli0006 | pLI100 | terminator | 5317 | 27 | + | 0.666667 | ||
pli0006 | pLI100 | CDS | 4977 | 336 | + | 0.345238 | ||
pli0007 | pLI100 | CDS | 5350 | 531 | - | 0.355932 | ||
pli0007 | pLI100 | terminator | 5321 | 20 | - | 0.75 | ||
pli0007 | pLI100 | RBS | 5891 | 6 | - | 0.5 | ||
pli0008 | pLI100 | terminator | 5971 | 18 | - | 0.5 | ||
pli0008 | pLI100 | CDS | 5994 | 765 | - | 0.415686 | ||
pli0008 | pLI100 | RBS | 6767 | 6 | - | 0.666667 | ||
pli0009 | pLI100 | RBS | 8498 | 6 | - | 0.833333 | ||
pli0009 | pLI100 | CDS | 7151 | 1341 | - | 0.36689 | ||
pli0010 | pLI100 | RBS | 8932 | 6 | - | 0.666667 | ||
pli0010 | pLI100 | CDS | 8484 | 441 | - | 0.333333 | ||
pli0011 | pLI100 | RBS | 9188 | 6 | - | 0.666667 | ||
pli0011 | pLI100 | CDS | 8936 | 240 | - | 0.370833 | ||
pli0012 | pLI100 | RBS | 9619 | 6 | + | 0.666667 | ||
pli0012 | Transposase | pLI100 | CDS | 9632 | 681 | + | 0.374449 | |
pli0013 | pLI100 | CDS | 10455 | 522 | - | 0.285441 | ||
pli0013 | pLI100 | RBS | 10986 | 6 | - | 0.5 | ||
pli0014 | pLI100 | CDS | 10991 | 576 | - | 0.270833 | ||
pli0014 | pLI100 | RBS | 11575 | 7 | - | 0.571429 | ||
pli0015 | pLI100 | CDS | 11582 | 984 | - | 0.331301 | ||
pli0015 | pLI100 | RBS | 12578 | 6 | - | 0.5 | ||
pli0016 | pLI100 | pseudo | 12827 | 231 | + | 0.406926 | ||
pli0017 | pLI100 | CDS | 13316 | 339 | + | 0.238938 | ||
pli0017 | pLI100 | terminator | 13684 | 37 | + | 0.459459 | ||
pli0018 | transposase (truncated) | pLI100 | pseudo | 13975 | 435 | + | 0.4 | |
pli0019 | Transposase, truncated | pLI100 | pseudo | 14440 | 258 | + | 0.321705 | |
pli0020 | pLI100 | CDS | 14724 | 483 | - | 0.36646 | ||
pli0020 | pLI100 | RBS | 15216 | 6 | - | 0.666667 | ||
pli0020 | pLI100 | terminator | 14623 | 28 | - | 0.428571 | ||
pli0021 | pLI100 | CDS | 15481 | 4710 | - | 0.346921 | ||
pli0021 | pLI100 | terminator | 15397 | 37 | - | 0.459459 | ||
pli0021 | pLI100 | RBS | 20199 | 6 | - | 0.666667 | ||
pli0022 | pLI100 | CDS | 20187 | 546 | - | 0.313187 | ||
pli0022 | pLI100 | RBS | 20740 | 6 | - | 0.833333 | ||
pli0023 | pLI100 | RBS | 21901 | 6 | - | 0.666667 | ||
pli0023 | pLI100 | CDS | 20732 | 1161 | - | 0.360034 | ||
pli0024 | pLI100 | CDS | 22150 | 681 | - | 0.35536 | ||
pli0024 | pLI100 | RBS | 22840 | 6 | - | 0.666667 | ||
pli0025 | pLI100 | CDS | 23026 | 294 | - | 0.391156 | ||
pli0025 | pLI100 | RBS | 23329 | 6 | - | 0.5 | ||
pli0026 | pLI100 | CDS | 23377 | 276 | + | 0.315217 | ||
pli0027 | pLI100 | CDS | 23688 | 3006 | + | 0.328343 | ||
pli0027 | pLI100 | RBS | 23671 | 6 | + | 0.666667 | ||
pli0027 | pLI100 | terminator | 26775 | 26 | + | 0.576923 | ||
pli0028 | Transposase | pLI100 | CDS | 26727 | 681 | - | 0.372981 | |
pli0028 | pLI100 | RBS | 27415 | 6 | - | 0.666667 | ||
pli0029 | pLI100 | CDS | 27445 | 1068 | - | 0.330524 | ||
pli0029 | pLI100 | RBS | 28521 | 6 | - | 0.666667 | ||
pli0030 | pLI100 | RBS | 29079 | 6 | - | 0.666667 | ||
pli0030 | pLI100 | CDS | 28515 | 558 | - | 0.292115 | ||
pli0031 | pLI100 | RBS | 29255 | 6 | - | 0.5 | ||
pli0031 | pLI100 | CDS | 29073 | 174 | - | 0.327586 | ||
pli0032 | Transposase | pLI100 | CDS | 29365 | 681 | + | 0.372981 | |
pli0032 | pLI100 | RBS | 29352 | 6 | + | 0.666667 | ||
pli0033 | Pseudogene, similar to C-terminal part of ATPase | pLI100 | pseudo | 30102 | 228 | + | 0.394737 | |
pli0034 | pLI100 | CDS | 30420 | 294 | + | 0.312925 | ||
pli0034 | pLI100 | RBS | 30407 | 6 | + | 0.666667 | ||
pli0035 | pLI100 | CDS | 30715 | 372 | + | 0.384409 | ||
pli0035 | pLI100 | terminator | 31102 | 26 | + | 0.5 | ||
pli0035 | pLI100 | RBS | 30701 | 6 | + | 0.5 | ||
pli0036 | pLI100 | CDS | 31220 | 366 | + | 0.36612 | ||
pli0036 | pLI100 | RBS | 31206 | 6 | + | 0.666667 | ||
pli0037 | pLI100 | RBS | 31606 | 6 | + | 0.666667 | ||
pli0037 | pLI100 | CDS | 31621 | 1743 | + | 0.380952 | ||
pli0038 | pLI100 | RBS | 33435 | 6 | + | 0.666667 | ||
pli0038 | pLI100 | CDS | 33450 | 1059 | + | 0.352219 | ||
pli0039 | pLI100 | RBS | 34548 | 6 | + | 0.5 | ||
pli0039 | pLI100 | CDS | 34562 | 1047 | + | 0.34766 | ||
pli0040 | pLI100 | RBS | 35616 | 6 | + | 0.5 | ||
pli0040 | pLI100 | CDS | 35629 | 1674 | + | 0.376344 | ||
pli0041 | pLI100 | CDS | 37584 | 663 | + | 0.371041 | ||
pli0042 | pLI100 | CDS | 38284 | 123 | + | 0.365854 | ||
pli0042 | pLI100 | RBS | 38271 | 6 | + | 0.666667 | ||
pli0042 | pLI100 | terminator | 38488 | 26 | + | 0.576923 | ||
pli0043 | pLI100 | RBS | 39128 | 6 | - | 0.666667 | ||
pli0043 | Transposase | pLI100 | CDS | 38440 | 681 | - | 0.372981 | |
pli0044 | pLI100 | RBS | 39298 | 6 | + | 0.666667 | ||
pli0044 | pLI100 | CDS | 39312 | 1365 | + | 0.404396 | ||
pli0045 | Pseudogene, similar to glycine-betaine binding (ABC transporter) | pLI100 | CDS | 40922 | 870 | - | 0.413793 | |
pli0045 | pLI100 | terminator | 40835 | 38 | - | 0.421053 | ||
pli0045 | pLI100 | RBS | 41799 | 6 | - | 0.833333 | ||
pli0046 | pLI100 | CDS | 42100 | 372 | + | 0.306452 | ||
pli0047 | pLI100 | CDS | 42662 | 765 | + | 0.4 | ||
pli0048 | pLI100 | RBS | 43876 | 6 | + | 0.5 | ||
pli0048 | pLI100 | CDS | 43889 | 1884 | + | 0.453291 | ||
pli0049 | pLI100 | RBS | 46581 | 6 | - | 0.666667 | ||
pli0049 | Transposase | pLI100 | CDS | 45892 | 681 | - | 0.38326 | |
pli0050 | pLI100 | RBS | 47605 | 6 | + | 0.333333 | ||
pli0050 | pLI100 | CDS | 47618 | 2667 | + | 0.347207 | ||
pli0051 | pLI100 | RBS | 50262 | 6 | + | 0.666667 | ||
pli0051 | pLI100 | CDS | 50277 | 723 | + | 0.370678 | ||
pli0052 | pLI100 | CDS | 51307 | 1722 | + | 0.351916 | ||
pli0052 | pLI100 | RBS | 51292 | 6 | + | 0.666667 | ||
pli0053 | pLI100 | CDS | 53042 | 2061 | + | 0.370209 | ||
pli0053 | pLI100 | RBS | 53028 | 6 | + | 0.666667 | ||
pli0054 | pLI100 | CDS | 55152 | 327 | + | 0.284404 | ||
pli0054 | pLI100 | RBS | 55141 | 6 | + | 0.5 | ||
pli0055 | pLI100 | RBS | 55483 | 6 | + | 0.666667 | ||
pli0055 | pLI100 | CDS | 55501 | 639 | + | 0.338028 | ||
pli0056 | pLI100 | RBS | 57405 | 6 | - | 0.5 | ||
pli0056 | pLI100 | CDS | 56844 | 552 | - | 0.402174 | ||
pli0057 | pLI100 | CDS | 57626 | 858 | - | 0.308858 | ||
pli0057 | pLI100 | RBS | 58491 | 6 | - | 0.666667 | ||
pli0058 | pLI100 | RBS | 59920 | 6 | - | 0.666667 | ||
pli0058 | pLI100 | CDS | 58476 | 1437 | - | 0.331246 | ||
pli0059 | pLI100 | CDS | 60071 | 600 | + | 0.348333 | ||
pli0059 | pLI100 | RBS | 60058 | 6 | + | 0.5 | ||
pli0060 | pLI100 | CDS | 60944 | 360 | + | 0.313889 | ||
pli0060 | pLI100 | RBS | 60932 | 6 | + | 0.333333 | ||
pli0061 | pLI100 | RBS | 61287 | 6 | + | 0.5 | ||
pli0061 | pLI100 | terminator | 63432 | 26 | + | 0.461538 | ||
pli0061 | pLI100 | CDS | 61300 | 2118 | + | 0.371105 | ||
pli0062 | pLI100 | RBS | 64515 | 7 | - | 0.571429 | ||
pli0062 | pLI100 | CDS | 64062 | 444 | - | 0.34009 | ||
pli0063 | pLI100 | RBS | 64610 | 6 | + | 0.666667 | ||
pli0063 | pLI100 | CDS | 64625 | 681 | + | 0.353891 | ||
pli0064 | pLI100 | CDS | 65525 | 906 | + | 0.338852 | ||
pli0064 | pLI100 | RBS | 65513 | 6 | + | 0.666667 | ||
pli0065 | pLI100 | RBS | 66434 | 6 | + | 0.5 | ||
pli0065 | pLI100 | terminator | 66942 | 21 | + | 0.52381 | ||
pli0065 | pLI100 | CDS | 66452 | 453 | + | 0.295806 | ||
pli0066 | pLI100 | RBS | 67052 | 6 | + | 0.666667 | ||
pli0066 | pLI100 | CDS | 67066 | 345 | + | 0.411594 | ||
pli0067 | pLI100 | CDS | 67398 | 1281 | + | 0.425449 | ||
pli0067 | pLI100 | RBS | 67380 | 6 | + | 0.5 | ||
pli0068 | pLI100 | terminator | 69002 | 28 | - | 0.285714 | ||
pli0068 | pLI100 | RBS | 69376 | 6 | - | 0.5 | ||
pli0068 | pLI100 | CDS | 69035 | 333 | - | 0.342342 | ||
pli0069 | pLI100 | RBS | 70249 | 6 | - | 0.666667 | ||
pli0069 | pLI100 | CDS | 69360 | 882 | - | 0.309524 | ||
pli0070 | pLI100 | RBS | 70855 | 6 | + | 0.666667 | ||
pli0070 | pLI100 | CDS | 70869 | 1650 | + | 0.430909 | ||
pli0071 | pLI100 | CDS | 72838 | 681 | + | 0.35536 | ||
pli0071 | pLI100 | RBS | 72823 | 6 | + | 0.666667 | ||
pli0072 | pLI100 | CDS | 73532 | 825 | + | 0.380606 | ||
pli0073 | pLI100 | CDS | 74919 | 990 | - | 0.380808 | ||
pli0073 | pLI100 | RBS | 75917 | 6 | - | 0.5 | ||
pli0074 | pLI100 | RBS | 76185 | 7 | - | 0.714286 | ||
pli0074 | pLI100 | CDS | 75915 | 261 | - | 0.383142 | ||
pli0075 | pLI100 | CDS | 76285 | 546 | - | 0.340659 | ||
pli0075 | pLI100 | RBS | 76840 | 6 | - | 0.666667 | ||
pli0076 | Transposase | pLI100 | CDS | 77849 | 810 | - | 0.361728 | |
pli0077 | pLI100 | RBS | 79002 | 6 | - | 0.5 | ||
pli0077 | pLI100 | CDS | 78712 | 282 | - | 0.351064 | ||
pli0078 | pLI100 | pseudo | 79075 | 1182 | + | 0.406091 | ||
pli0079 | pLI100 | RBS | 80387 | 6 | + | 0.666667 | ||
pli0079 | pLI100 | CDS | 80403 | 1155 | + | 0.360173 | ||
pli0080 | pLI100 | RBS | 81557 | 6 | + | 0.5 | ||
pli0080 | pLI100 | CDS | 81574 | 294 | + | 0.323129 |