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2024-05-10 17:55:08

Gene list

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Organism: Yersinia pestis CO92, CO-92 Biovar Orientalis
Gene type: CDS

Number of genes found: 198

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YMT1.42Ac hypothetical protein YPMT1.42AcpMT1 CDS44876 147 - 0.455782
YPCD1.01 putative transposasepCD1 CDS88 1023 + 0.527859
YPCD1.02 putative ATP-binding proteinpCD1 CDS1110 780 + 0.503846
YPCD1.03c pCD1 CDS1956 249 - 0.497992
YPCD1.04 pCD1 CDS2304 648 + 0.546296
YPCD1.05c putative yopE chaperonepCD1 CDS3014 393 - 0.409669
YPCD1.06 putative outer membrane virulence proteinpCD1 CDS3600 660 + 0.510606
YPCD1.07 hypothetical protein YPCD1.07pCD1 CDS4261 297 + 0.373737
YPCD1.08c hypothetical protein YPCD1.08cpCD1 CDS4399 300 - 0.38
YPCD1.09c hypothetical protein YPCD1.09cpCD1 CDS4691 276 - 0.431159
YPCD1.10c pCD1 CDS5149 249 - 0.429719
YPCD1.12c putative plasmid partitioning control proteinpCD1 CDS6195 963 - 0.417445
YPCD1.13c putative plasmid partitioning transcription repressorpCD1 CDS7157 1167 - 0.441302
YPCD1.14c putative transposase remnantpCD1 CDS9123 264 - 0.503788
YPCD1.15c hypothetical protein YPCD1.15cpCD1 CDS9429 459 - 0.551198
YPCD1.16c hypothetical protein YPCD1.16cpCD1 CDS9911 324 - 0.481481
YPCD1.18c pCD1 CDS11260 144 - 0.527778
YPCD1.19c putative virulence determinant proteinpCD1 CDS11562 549 - 0.335155
YPCD1.20 putative cytotoxic effector proteinpCD1 CDS12610 969 + 0.431373
YPCD1.21 putative yopT chaperonepCD1 CDS13578 399 + 0.411028
YPCD1.22c hypothetical protein YPCD1.22cpCD1 CDS14020 390 - 0.276923
YPCD1.23 hypothetical protein YPCD1.23pCD1 CDS14681 420 + 0.388095
YPCD1.24c pCD1 CDS15628 219 - 0.461187
YPCD1.25 pCD1 CDS15976 318 + 0.440252
YPCD1.26c putative targeted effector proteinpCD1 CDS16336 1230 - 0.389431
YPCD1.28c putative Yop negative regulation/targeting componentpCD1 CDS19294 921 - 0.431053
YPCD1.29c putative Yop targeting proteinpCD1 CDS20233 1206 - 0.466833
YPCD1.30c putative yopB/yopD chaperonepCD1 CDS21416 507 - 0.441815
YPCD1.31c putative V antigen, antihost protein/regulatorpCD1 CDS21935 981 - 0.377166
YPCD1.32c putative Yop regulatorpCD1 CDS22917 288 - 0.46875
YPCD1.33c hypothetical protein lcrRpCD1 CDS23246 441 - 0.487528
YPCD1.34c putative membrane-bound Yop proteinpCD1 CDS23683 2115 - 0.463357
YPCD1.35c putative type III secretion proteinpCD1 CDS25784 345 - 0.46087
YPCD1.36c putative type III secretion proteinpCD1 CDS26125 369 - 0.495935
YPCD1.37c putative type III secretion proteinpCD1 CDS26490 372 - 0.526882
YPCD1.38c putative Yop secretion and targeting proteinpCD1 CDS26848 279 - 0.433692
YPCD1.39c putative membrane-bound Yop targeting proteinpCD1 CDS27107 882 - 0.461451
YPCD1.40 putative Yops secretion ATP synthasepCD1 CDS28186 1320 + 0.508333
YPCD1.41 putative type III secretion proteinpCD1 CDS29502 465 + 0.458065
YPCD1.42 putative type III secretion proteinpCD1 CDS29966 1368 + 0.486842
YPCD1.43 putative type III secretion proteinpCD1 CDS31330 924 + 0.481602
YPCD1.44 putative Yop secretion membrane proteinpCD1 CDS32250 654 + 0.43578
YPCD1.45 putative type III secretion proteinpCD1 CDS32905 267 + 0.453184
YPCD1.46 putative type III secretion proteinpCD1 CDS33168 786 + 0.428753
YPCD1.47 putative type III secretion proteinpCD1 CDS33953 1065 + 0.431925
YPCD1.48 putative Yop targeting lipoproteinpCD1 CDS35593 396 + 0.444444
YPCD1.49 putative thermoregulatory proteinpCD1 CDS36112 816 + 0.416667
YPCD1.50 hypothetical protein YPCD1.50pCD1 CDS37006 99 + 0.313131
YPCD1.51 hypothetical protein YPCD1.51pCD1 CDS37330 414 + 0.417874
YPCD1.52 putative type III secretion proteinpCD1 CDS37749 1824 + 0.454496
YPCD1.53 putative type III secretion proteinpCD1 CDS39569 1260 + 0.46746
YPCD1.54 putative type III secretion proteinpCD1 CDS40825 201 + 0.422886
YPCD1.55 putative type III secretion proteinpCD1 CDS41026 264 + 0.416667
YPCD1.56 putative type III secretion proteinpCD1 CDS41291 348 + 0.439655
YPCD1.57 putative type III secretion proteinpCD1 CDS41635 498 + 0.429719
YPCD1.58 putative type III secretion proteinpCD1 CDS42133 348 + 0.468391
YPCD1.59 putative type III secretion lipoproteinpCD1 CDS42487 735 + 0.428571
YPCD1.60 putative type III secretion proteinpCD1 CDS43221 630 + 0.485714
YPCD1.61 putative type III secretion proteinpCD1 CDS43796 666 + 0.448949
YPCD1.62 putative type III secretion regulatory proteinpCD1 CDS44686 348 + 0.479885
YPCD1.63 putative transposase ORFApCD1 CDS45581 267 + 0.434457
YPCD1.64 putative transposase ORFBpCD1 CDS45871 435 + 0.455172
YPCD1.65 putative transposasepCD1 CDS46302 309 + 0.459547
YPCD1.66 pCD1 CDS46623 279 + 0.473118
YPCD1.67c putative protein-tyrosine phosphatase Yop effectorpCD1 CDS47122 1407 - 0.474058
YPCD1.68c pCD1 CDS48811 207 - 0.608696
YPCD1.69 pCD1 CDS49044 582 + 0.493127
YPCD1.70c pCD1 CDS49657 99 - 0.40404
YPCD1.71c putative targeted effector proteinpCD1 CDS50211 867 - 0.344867
YPCD1.72c putative targeted effector protein kinasepCD1 CDS51473 2199 - 0.481583
YPCD1.73c hypothetical protein YPCD1.73cpCD1 CDS53679 450 - 0.451111
YPCD1.74c pCD1 CDS54368 117 - 0.470085
YPCD1.75c pCD1 CDS54541 153 - 0.509804
YPCD1.77c putative replication initiation proteinpCD1 CDS56291 867 - 0.542099
YPCD1.78c putative repA translation proteinpCD1 CDS57150 75 - 0.44
YPCD1.79c putative replication transcriptional regulatorpCD1 CDS57466 255 - 0.423529
YPCD1.81 pCD1 CDS58307 234 + 0.542735
YPCD1.82c hypothetical protein YPCD1.82cpCD1 CDS58523 408 - 0.539216
YPCD1.83c hypothetical protein YPCD1.83cpCD1 CDS58954 324 - 0.487654
YPCD1.84c hypothetical protein YPCD1.84cpCD1 CDS59443 492 - 0.554878
YPCD1.85 pCD1 CDS59946 294 + 0.503401
YPCD1.89 pCD1 CDS62474 381 + 0.509186
YPCD1.90c putative transposasepCD1 CDS62851 2316 - 0.519862
YPCD1.91 putative resolvasepCD1 CDS65330 552 + 0.46558
YPCD1.92 hypothetical protein YPCD1.92pCD1 CDS66503 330 + 0.281818
YPCD1.93 putative transposasepCD1 CDS66932 267 + 0.479401
YPCD1.94 putative transposasepCD1 CDS67222 810 + 0.504938
YPCD1.95c putative yopH targeting proteinpCD1 CDS68179 426 - 0.41784
YPCD1.96c putative transposasepCD1 CDS68947 432 - 0.569444
YPCD1.97c putative transposasepCD1 CDS69378 927 - 0.558792
YPMT1.01 putative transposasepMT1 CDS87 1023 + 0.527859
YPMT1.02 putative transposasepMT1 CDS1106 783 + 0.50447
YPMT1.03c hypothetical protein YPMT1.03cpMT1 CDS2022 609 - 0.456486
YPMT1.04c putative phage tail proteinpMT1 CDS2932 2889 - 0.499135
YPMT1.05c hypothetical protein YPMT1.05cpMT1 CDS5901 618 - 0.496764
YPMT1.06c putative phage tail proteinpMT1 CDS6536 4638 - 0.526304
YPMT1.07c putative phage tail proteinpMT1 CDS11189 588 - 0.527211
YPMT1.08c putative phage tail proteinpMT1 CDS11764 798 - 0.551378
YPMT1.09c putative phage tail proteinpMT1 CDS12554 732 - 0.52459
YPMT1.10c putative phage tail proteinpMT1 CDS13342 336 - 0.488095
YPMT1.11c putative membrane proteinpMT1 CDS13719 4578 - 0.56706
YPMT1.12c hypothetical protein YPMT1.12cpMT1 CDS18304 270 - 0.551852
YPMT1.13c hypothetical protein YPMT1.13cpMT1 CDS18654 318 - 0.5
YPMT1.14c hypothetical protein YPMT1.14cpMT1 CDS19031 747 - 0.535475
YPMT1.15c hypothetical protein YPMT1.15cpMT1 CDS19852 384 - 0.466146
YPMT1.16c hypothetical protein YPMT1.16cpMT1 CDS20237 474 - 0.544304
YPMT1.17c hypothetical protein YPMT1.17cpMT1 CDS20701 459 - 0.535948
YPMT1.18c hypothetical protein YPMT1.18cpMT1 CDS21143 834 - 0.544365
YPMT1.19c hypothetical protein YPMT1.19cpMT1 CDS21976 435 - 0.51954
YPMT1.20c hypothetical protein YPMT1.20cpMT1 CDS22454 663 - 0.526395
YPMT1.21c hypothetical protein YPMT1.21cpMT1 CDS23191 876 - 0.539954
YPMT1.22c hypothetical protein YPMT1.22cpMT1 CDS24093 834 - 0.556355
YPMT1.23c hypothetical protein YPMT1.23cpMT1 CDS24949 1590 - 0.509434
YPMT1.24c hypothetical protein YPMT1.24cpMT1 CDS26557 1257 - 0.540971
YPMT1.25Ac hypothetical protein YPMT1.25AcpMT1 CDS28653 267 - 0.524345
YPMT1.25c hypothetical protein YPMT1.25cpMT1 CDS27816 642 - 0.556075
YPMT1.26Ac hypothetical protein YPMT1.26AcpMT1 CDS29825 255 - 0.52549
YPMT1.26c hypothetical protein YPMT1.26cpMT1 CDS28929 900 - 0.556667
YPMT1.27c putative ABC transporter ATP-binding proteinpMT1 CDS30072 699 - 0.553648
YPMT1.28c hypothetical protein YPMT1.28cpMT1 CDS30707 669 - 0.559043
YPMT1.29c hypothetical protein YPMT1.29cpMT1 CDS31375 699 - 0.527897
YPMT1.30 hypothetical protein YPMT1.30pMT1 CDS32138 1560 + 0.514103
YPMT1.31 hypothetical protein YPMT1.31pMT1 CDS33700 279 + 0.458781
YPMT1.32 putative lipoproteinpMT1 CDS34038 423 + 0.541371
YPMT1.33 putative transcriptional regulatorpMT1 CDS34465 528 + 0.517045
YPMT1.34 hypothetical protein YPMT1.34pMT1 CDS35314 651 + 0.394777
YPMT1.34A hypothetical protein YPMT1.34ApMT1 CDS36049 228 + 0.372807
YPMT1.35c hypothetical protein YPMT1.35cpMT1 CDS36915 483 - 0.503106
YPMT1.36c hypothetical protein YPMT1.36cpMT1 CDS37603 288 - 0.524306
YPMT1.37c putative transposasepMT1 CDS38084 459 - 0.457516
YPMT1.38c hypothetical protein YPMT1.38cpMT1 CDS38751 570 - 0.52807
YPMT1.39c hypothetical protein YPMT1.39cpMT1 CDS39333 747 - 0.497992
YPMT1.3Ac hypothetical protein YPMT1.3AcpMT1 CDS2723 213 - 0.42723
YPMT1.40Ac hypothetical protein YPMT1.40AcpMT1 CDS41994 225 - 0.484444
YPMT1.40c putative exonuclease subunit 2pMT1 CDS40069 1917 - 0.529995
YPMT1.41c putative exonuclease subunit 1pMT1 CDS42215 1086 - 0.540516
YPMT1.42 putative periplasmic proteinpMT1 CDS43716 1023 + 0.449658
YPMT1.43c hypothetical protein YPMT1.43cpMT1 CDS45098 645 - 0.528682
YPMT1.44 putative replication protein ApMT1 CDS46487 1065 + 0.514554
YPMT1.45c hypothetical protein YPMT1.45cpMT1 CDS48120 216 - 0.550926
YPMT1.46Ac hypothetical protein YPMT1.46AcpMT1 CDS48664 180 - 0.455556
YPMT1.46Bc hypothetical protein YPMT1.46BcpMT1 CDS48884 276 - 0.467391
YPMT1.46c hypothetical protein YPMT1.46cpMT1 CDS48332 336 - 0.505952
YPMT1.47c hypothetical protein YPMT1.47cpMT1 CDS49227 411 - 0.559611
YPMT1.48c hypothetical protein YPMT1.48cpMT1 CDS49621 372 - 0.497312
YPMT1.49Ac hypothetical protein YPMT1.49AcpMT1 CDS50980 201 - 0.447761
YPMT1.49c putative lipoproteinpMT1 CDS50146 831 - 0.515042
YPMT1.50Ac hypothetical protein YPMT1.50AcpMT1 CDS52350 267 - 0.546816
YPMT1.50c putative recombinasepMT1 CDS51271 1077 - 0.545961
YPMT1.51c putative exonucleasepMT1 CDS52616 945 - 0.526984
YPMT1.52c hypothetical protein YPMT1.52cpMT1 CDS53621 1029 - 0.519922
YPMT1.53c hypothetical protein YPMT1.53cpMT1 CDS54769 474 - 0.5
YPMT1.54 hypothetical protein YPMT1.54pMT1 CDS55745 564 + 0.512411
YPMT1.55c hypothetical protein YPMT1.55cpMT1 CDS56338 444 - 0.518018
YPMT1.57c putative IS100 transposasepMT1 CDS57333 783 - 0.50447
YPMT1.58c putative transposasepMT1 CDS58112 1023 - 0.527859
YPMT1.59c putative DNA-binding proteinpMT1 CDS59258 2010 - 0.61393
YPMT1.60c hypothetical protein YPMT1.60cpMT1 CDS61340 231 - 0.593074
YPMT1.61c putative antirestriction proteinpMT1 CDS62283 507 - 0.538462
YPMT1.62c hypothetical protein YPMT1.62cpMT1 CDS63188 780 - 0.552564
YPMT1.63Ac hypothetical protein YPMT1.63AcpMT1 CDS64451 222 - 0.536036
YPMT1.63c hypothetical protein YPMT1.63cpMT1 CDS64021 492 - 0.558943
YPMT1.64c putative DNA methylasepMT1 CDS64672 678 - 0.581121
YPMT1.65 hypothetical protein YPMT1.65pMT1 CDS65742 309 + 0.504854
YPMT1.66c putative DNA-binding proteinpMT1 CDS66212 1398 - 0.483548
YPMT1.67c putative partitioning protein BpMT1 CDS67988 972 - 0.447531
YPMT1.68A hypothetical protein YPMT1.68ApMT1 CDS70463 228 + 0.434211
YPMT1.68c putative partitioning protein ApMT1 CDS68956 1206 - 0.451907
YPMT1.69 hypothetical protein YPMT1.69pMT1 CDS70690 327 + 0.434251
YPMT1.70 putative resolvasepMT1 CDS71216 621 + 0.495974
YPMT1.71 hypothetical protein YPMT1.71pMT1 CDS71857 987 + 0.507599
YPMT1.72c hypothetical protein YPMT1.72cpMT1 CDS72866 276 - 0.518116
YPMT1.73 hypothetical protein YPMT1.73pMT1 CDS73881 489 + 0.435583
YPMT1.74 murine toxinpMT1 CDS74612 1599 + 0.380238
YPMT1.75c hypothetical protein YPMT1.75cpMT1 CDS76455 471 - 0.558386
YPMT1.76 hypothetical protein YPMT1.76pMT1 CDS76996 309 + 0.566343
YPMT1.76A hypothetical protein YPMT1.76ApMT1 CDS77219 372 + 0.526882
YPMT1.77c pMT1 CDS77583 84 - 0.416667
YPMT1.79c putative transposasepMT1 CDS78286 1023 - 0.519062
YPMT1.80c putative transposasepMT1 CDS79777 1209 - 0.496278
YPMT1.81c putative F1 operon positive regulatory proteinpMT1 CDS81334 924 - 0.333333
YPMT1.82 putative F1 chaperone proteinpMT1 CDS82567 777 + 0.405405
YPMT1.83 putative F1 capsule anchoring proteinpMT1 CDS83368 2502 + 0.396083
YPMT1.84 putative F1 capsule antigenpMT1 CDS85950 513 + 0.42885
YPMT1.85 putative integrasepMT1 CDS87147 1179 + 0.478372
YPMT1.86A hypothetical protein YPMT1.86ApMT1 CDS88969 213 + 0.43662
YPMT1.86c hypothetical protein YPMT1.86cpMT1 CDS88320 387 - 0.496124
YPMT1.87 putative porphyrin biosynthetic proteinpMT1 CDS89291 2367 + 0.52049
YPMT1.88 putative porphyrin biosynthetic proteinpMT1 CDS91754 1236 + 0.526699
YPPCP1.01 putative transposasepPCP1 CDS87 1023 + 0.527859
YPPCP1.02 putative ATP-binding proteinpPCP1 CDS1106 783 + 0.50447
YPPCP1.03 putative replication regulatory proteinpPCP1 CDS2925 195 + 0.502564
YPPCP1.04 pesticin immunity proteinpPCP1 CDS4355 426 + 0.319249
YPPCP1.05c pesticinpPCP1 CDS4815 1074 - 0.391993
YPPCP1.06 hypothetical proteinpPCP1 CDS6006 417 + 0.491607
YPPCP1.07 coagulase/fibrinolysin precursorpPCP1 CDS6665 939 + 0.419595
YPPCP1.08c putative transcriptional regulatorpPCP1 CDS7790 300 - 0.456667
YPPCP1.09c hypothetical proteinpPCP1 CDS8089 348 - 0.439655