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2024-05-02 03:56:37

Gene list

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Organism: IncP-1beta multiresistance plasmid pB8

Number of genes found: 84

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IncP-1beta multiresistance plasmid pB8
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pB8_006 hypothetical proteinSubName: Full=Uncharacterized protein; pB8 CDS5877 279 + 0.655914
NA pB8_008 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; pB8 CDS6615 534 + 0.558052
NA inverse_core-site_oxa2 pB8 repeat_region28043 7 + 0.714286
NA pB8 repeat_region930 7831 + 0.614992
NA DR-Tn501 pB8 repeat_unit925 5 + 0.2
NA core-site_In pB8 repeat_region29001 7 + 0.285714
NA pB8 misc_feature27230 820 + 0.491463
NA IRi pB8 repeat_region25879 25 + 0.52
NA DR-R pB8 repeat_unit7824 5 + 0.4
NA pB8_003 pB8 pseudo1752 234 + 0.679487
NA pB8 repeat_region1987 5837 + 0.618982
NA pB8 misc_feature28106 852 + 0.585681
NA IR-L_Tn5501 pB8 repeat_unit1987 38 + 0.578947
NA IR-merR pB8 repeat_unit930 38 + 0.473684
NA DR-L pB8 repeat_unit1982 5 + 0.4
NA pB8 repeat_region25879 7824 + 0.601738
NA IR_Tn402 pB8 repeat_region33678 25 + 0.44
NA core-site_aadA4 pB8 repeat_region28106 7 + 0.571429
NA pB8_002 putative polyketide cyclaseSubName: Full=Putative polyketide cyclase; pB8 CDS1227 423 - 0.595745
NA pB8_036 putative acetyltransferaseSubName: Full=Acetyltransferase; SubName: Full=Acetyltransferase, gnat family; SubName: Full=GCN5-like N-acetyltransferase; SubName: Full=Puromycin N-acetyltransferase-like protein; SubName: Full=Putative acetyltransferase; SubName: Full=Putative acetyltransferase protein; SubName: Full=Uncharacterized protein; pB8 CDS30418 501 + 0.650699
NA IR_mer_2 pB8 repeat_region8731 30 + 0.5
NA inverse_core-site_aadA4 pB8 repeat_region28951 7 + 0.571429
NA core-site_oxa2 pB8 repeat_region27230 7 + 0.714286
NA pB8_010 pB8 pseudo7825 732 + 0.620219
NA IR-R_Tn5501 pB8 repeat_unit7786 38 + 0.605263
'merR pB8_001 MerC protein (truncated) pB8 CDS963 150 - 0.626667
aadA4 pB8_033 aminoglycoside adenylyltransferaseSubName: Full=Aminoglycoside adenylyltransferase; pB8 CDS28116 789 + 0.584284
incC2 pB8_053 IncC2 proteinSubName: Full=IncC2 partitioning protein; SubName: Full=IncC2 protein; SubName: Full=Plasmid partitioning protein; pB8 CDS51637 765 - 0.644444
intI1 pB8_031 integraseSubName: Full=DNA integrase; SubName: Full=IntI1; SubName: Full=IntI1 integrase; SubName: Full=Integrase; SubName: Full=Integrase IntI1; SubName: Full=Integrase for class 1 integron; SubName: Full=Integrase/recombinase; SubName: Full=Site specific recombinase; pB8 CDS26081 1014 - 0.612426
kfrA pB8_051 KfrA proteinSubName: Full=KfrA; SubName: Full=KfrA protein; SubName: Full=Plasmid maintenance protein; SubName: Full=Regulatory protein; pB8 CDS49380 1032 - 0.748062
kfrB pB8_050 KfrB proteinSubName: Full=Conjugative transfer protein; SubName: Full=KfrB; SubName: Full=KfrB protein; SubName: Full=KfrB:stable inheritance protein; SubName: Full=Stable inheritance protein; SubName: Full=TraO protein; pB8 CDS48862 348 - 0.583333
kfrC pB8_049 KfrC proteinSubName: Full=Conjugative transfer protein; SubName: Full=KfrC; SubName: Full=KfrC protein; SubName: Full=KfrC:stable inheritance protein; SubName: Full=Stable inheritance protein; SubName: Full=TraN protein; pB8 CDS48180 654 - 0.69419
klcA pB8_062 KlcA proteinSubName: Full=KlcA; SubName: Full=KlcA protein; SubName: Full=KlcA:antirestriction protein; SubName: Full=Plasmid maintenance protein; pB8 CDS56021 429 - 0.685315
klcB pB8_061 KlcB proteinSubName: Full=KlcB; SubName: Full=KlcB protein; pB8 CDS54764 1206 - 0.696517
kleA pB8_059 KleA proteinSubName: Full=KleA; SubName: Full=KleA protein; SubName: Full=KleA:stable inheritance protein; SubName: Full=Plasmid maintenance protein; pB8 CDS54094 237 - 0.64135
kleB pB8_058 KleB proteinSubName: Full=KleB; SubName: Full=KleB protein; SubName: Full=KleB: stable inheritance protein; SubName: Full=Plasmid maintenance protein; pB8 CDS53820 216 - 0.625
kleE pB8_057 KleE proteinSubName: Full=KleE protein; SubName: Full=KleE:stable inheritance protein; SubName: Full=Plasmid maintenance protein; pB8 CDS53346 330 - 0.645455
kleF pB8_056 KleF proteinSubName: Full=KleF; SubName: Full=KleF protein; SubName: Full=Uncharacterized protein; pB8 CDS52814 531 - 0.683616
kleG pB8_055 KleG proteinSubName: Full=KleG protein; pB8 CDS52807 264 - 0.681818
kluA pB8_063 KluA regulatory proteinSubName: Full=KluA; SubName: Full=KluA regulatory protein; SubName: Full=KluA: addiction module antitoxin protein; SubName: Full=Uncharacterized protein; pB8 CDS56618 270 + 0.666667
kluB pB8_064 plasmid stability proteinSubName: Full=KluB; SubName: Full=Plasmid stability protein; SubName: Full=Uncharacterized protein; pB8 CDS56884 315 + 0.653968
korA pB8_054 KorA proteinSubName: Full=KorA; SubName: Full=KorA protein; SubName: Full=KorA repressor protein; SubName: Full=KorA:transcriptional repressor protein; pB8 CDS52398 303 - 0.623762
korB pB8_052 KorB proteinSubName: Full=KorB; SubName: Full=KorB DNA binding protein; SubName: Full=KorB protein; SubName: Full=KorB repressor and partitioning protein; SubName: Full=KorB:transcriptional repressor protein/plasmid partitioning protein; SubName: Full=Plasmid partitioning protein; SubName: Full=Transcriptional repressor protein/plasmid partitioning protein; pB8 CDS50591 1050 - 0.671429
korC pB8_060 KorC proteinSubName: Full=KorC; SubName: Full=KorC protein; SubName: Full=KorC repressor protein; SubName: Full=Plasmid maintenance protein; pB8 CDS54490 258 - 0.697674
oxa-2 pB8_032 Oxa-2 beta-lactamase precursorSubName: Full=Beta-lactamase; SubName: Full=OXA-2; SubName: Full=Oxa-2 beta-lactamase; SubName: Full=Oxa-2, class D beta-lactamase; pB8 CDS27252 828 + 0.5
parE-like pB8_007 plasmid stabilization protein ParESubName: Full=Plasmid stabilization protein ParE; pB8 CDS6152 285 + 0.62807
qacEdelta1 pB8_034 small multidrug resistance proteinSubName: Full=Efflux protein; SubName: Full=QacEdelta1; SubName: Full=QacEdelta1 multidrug exporter; SubName: Full=QacEdelta1 protein; SubName: Full=QacEdelta1, multidrug efflux protein; SubName: Full=Quaternary ammonium compound resistance protein; SubName: Full=Quaternary ammonium-compound resistance protein; SubName: Full=Small exporter protein; SubName: Full=Small multidrug resistance protein; pB8 CDS29110 348 + 0.5
qacF pB8_009 small multidrug resistance protein (SMR)SubName: Full=Small multidrug resistance protein (SMR); pB8 CDS7152 333 + 0.540541
ssb pB8_012 single strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; pB8 CDS10507 342 - 0.596491
sul1 pB8_035 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; EC=2.5.1.15; SubName: Full=Dihydropteroate synthase Sul1; SubName: Full=Dihydropteroate synthetase; SubName: Full=Dihydropteroate synthetase type 1; SubName: Full=Sul1; SubName: Full=Sul1 dihydropteroate synthase; SubName: Full=SulI; SubName: Full=Sulphonamide resistance protein; pB8 CDS29451 840 + 0.616667
tniA pB8_038 possible transposaseSubName: Full=Possible transposase; SubName: Full=Transposase; SubName: Full=Transposase TniA; pB8 CDS31882 1680 - 0.647024
tniB pB8_037 NTP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=NTP-binding protein; SubName: Full=TniB; pB8 CDS30887 993 - 0.64854
tnpA pB8_004 TransposaseSubName: Full=Transposase; pB8 CDS2019 3030 - 0.634653
tnpR pB8_005 resolvaseSubName: Full=Resolvase; pB8 CDS5045 594 - 0.66835
traC2 pB8_039 TraC2 primaseSubName: Full=TraC2 primase; pB8 CDS34112 4347 - 0.68622
traD pB8_040 TraD proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=TraD; SubName: Full=TraD protein; SubName: Full=TraD: DNA processing protein; pB8 CDS38462 390 - 0.725641
traE pB8_041 possible DNA topoisomeraseRecName: Full=DNA topoisomerase; EC=5.99.1.2; pB8 CDS38873 2064 - 0.671512
traF pB8_042 possible proteaseSubName: Full=Conjugal transfer protein; SubName: Full=DNA processing protein; SubName: Full=Maturation peptidase; SubName: Full=Possible protease; SubName: Full=TraF; SubName: Full=TraF protein; SubName: Full=TraF: DNA processing protein, signal peptidase; pB8 CDS40948 537 - 0.66108
traG pB8_043 TraG proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=DNA transport protein; SubName: Full=TraG; SubName: Full=TraG protein; pB8 CDS41481 1914 - 0.661442
traH pB8_044 TraH proteinSubName: Full=DNA processing protein; SubName: Full=Relaxosome stabilisation protein; SubName: Full=TraH; SubName: Full=TraH protein; SubName: Full=TraH: DNA processing protein, relaxosome stabilization; pB8 CDS43693 393 - 0.676845
traI pB8_044 DNA relaxaseSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=DNA relaxase; pB8 CDS43391 2241 - 0.668452
traJ pB8_045 oriT binding proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=OriT binding protein; SubName: Full=TraJ; SubName: Full=TraJ protein; SubName: Full=TraJ: DNA processing protein, oriT recognizing protein; pB8 CDS45666 375 - 0.669333
traK pB8_046 oriT binding proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=OriT binding protein; SubName: Full=OriT binding protein TraK; SubName: Full=TraK; SubName: Full=TraK protein; SubName: Full=TraK: DNA processing protein, oriT binding protein; pB8 CDS46414 399 + 0.629073
traL pB8_047 TraL proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=TraL; SubName: Full=TraL origin of transfer (OriT) protein; SubName: Full=TraL protein; SubName: Full=TraL:DNA processing protein; pB8 CDS46812 726 + 0.629477
traM pB8_048 TraM proteinSubName: Full=Conjugative transfer protein; SubName: Full=DNA processing protein; SubName: Full=TraM; SubName: Full=TraM protein; SubName: Full=TraM: DNA processing protein; pB8 CDS47537 441 + 0.675737
trbA pB8_013 DNA binding proteinSubName: Full=DNA binding protein; SubName: Full=TrbA mating pair formation protein, transcription regulator; SubName: Full=TrbA repressor protein; SubName: Full=TrbA:mating pair formation protein, transcription regulator; pB8 CDS10962 363 + 0.589532
trbB pB8_014 ATPaseSubName: Full=ATPase; SubName: Full=Mating pair formation protein; SubName: Full=Putative ATPase, autophosphorylase; SubName: Full=TrbB; SubName: Full=TrbB protein; SubName: Full=TrbB:mating pair formation protein, ATPase; pB8 CDS11634 963 + 0.619938
trbC pB8_015 putative prepilinSubName: Full=Mating pair formation protein; SubName: Full=Putative prepilin; SubName: Full=TrbC; SubName: Full=TrbC protein; SubName: Full=TrbC:mating pair formation protein, prepilin; pB8 CDS12613 465 + 0.668817
trbD pB8_016 TrbD proteinSubName: Full=Conjugative transfer protein; SubName: Full=Mating pair formation protein; SubName: Full=TrbD; SubName: Full=TrbD conjugal transfer protein; SubName: Full=TrbD protein; SubName: Full=TrbD:mating pair formation protein; pB8 CDS13081 312 + 0.634615
trbE pB8_017 TrbE proteinSubName: Full=TrbE protein; pB8 CDS13389 2559 + 0.639703
trbF pB8_018 TrbF proteinSubName: Full=TrbF protein; SubName: Full=TrbF:mating pair formation protein; pB8 CDS15944 783 + 0.659004
trbG pB8_019 TrbG proteinSubName: Full=TrbG protein; pB8 CDS16723 921 + 0.639522
trbH pB8_020 TrbH proteinSubName: Full=Mating pair formation protein; SubName: Full=TrbH; SubName: Full=TrbH protein; SubName: Full=TrbH:mating pair formation protein; pB8 CDS17646 489 + 0.705521
trbI pB8_021 TrbI proteinSubName: Full=Mating pair formation protein; SubName: Full=TrbI; SubName: Full=TrbI protein; SubName: Full=TrbI:mating pair formation protein; pB8 CDS18139 1422 + 0.672996
trbJ pB8_022 TrbJ proteinSubName: Full=Entry exclusion during conjugation protein; SubName: Full=TrbJ; SubName: Full=TrbJ protein; SubName: Full=TrbJ:entry exclusion during conjugation protein; pB8 CDS19581 765 + 0.610458
trbK pB8_023 TrbK proteinSubName: Full=Entry exclusion during conjugation protein; SubName: Full=TrbK; SubName: Full=TrbK entry exclusion protein; SubName: Full=TrbK protein; SubName: Full=TrbK:entry exclusion during conjugation protein; pB8 CDS20355 228 + 0.622807
trbL pB8_024 TrbL proteinSubName: Full=Mating pair formation protein; SubName: Full=Putative DNA topoisomerase; SubName: Full=TrbL; SubName: Full=TrbL protein; pB8 CDS20593 1719 + 0.683537
trbM pB8_025 TrbM proteinSubName: Full=Mating pair formation protein; SubName: Full=TrbM; SubName: Full=TrbM protein; SubName: Full=TrbM:mating pair formation protein; pB8 CDS22329 588 + 0.673469
trbN pB8_026 putative muramidaseSubName: Full=Mating pair formation protein; SubName: Full=Putative muramidase; SubName: Full=TrbN; SubName: Full=TrbN protein; SubName: Full=TrbN:mating pair formation protein, muramidase/lysozyme; pB8 CDS22930 636 + 0.691824
trbO pB8_027 TrbO proteinSubName: Full=Mating pair formation protein; SubName: Full=TrbO; SubName: Full=TrbO conjugal transfer protein; SubName: Full=TrbO protein; pB8 CDS23594 267 + 0.629214
trbP pB8_028 TrbP proteinSubName: Full=Mating pair formation protein; SubName: Full=TraC; SubName: Full=TrbP; SubName: Full=TrbP protein; SubName: Full=TrbP:mating pair formation protein; pB8 CDS23860 699 + 0.682403
trfA pB8_011 replication initiation proteinSubName: Full=Long form TrfA replication protein; SubName: Full=Replication initiation protein; SubName: Full=TrfA1; SubName: Full=TrfA1:replication initiation protein; pB8 CDS9240 1221 - 0.657658
upf30.5 pB8_029 putative outer membrane proteinSubName: Full=Outer membrane protein; SubName: Full=Putative outer membrane protein; SubName: Full=Upf30.5; SubName: Full=Upf30.5 protein; SubName: Full=Upf30.5:outer membrane protein; pB8 CDS24574 432 + 0.659722
upf31.0 pB8_030 putative adenine methylaseSubName: Full=Putative adenine methylase; SubName: Full=Upf31.0 putative adenine methylase; SubName: Full=Upf31.0:major outer membrane lipoprotein; pB8 CDS25160 675 + 0.659259