TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-06 20:47:25

Gene list

Applied filters:

Organism: Pseudomonas putida

Number of genes found: 263

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas putida
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS17264 456 + 0.638158
NA putative transmembrane proteinSubName: Full=Putative transmembrane protein; pWW0 CDS77901 1290 + 0.600775
NA pWW0 RBS87186 7 - 0.571429
NA pWW0 RBS14077 6 + 0.5
NA pWW0 RBS11786 6 + 0.5
NA hypothetical proteinSubName: Full=PnbR-like regulatory protein; SubName: Full=Uncharacterized protein; pWW0 CDS87274 408 + 0.544118
NA pWW0 RBS21898 4 - 0.75
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS92997 486 - 0.567901
NA pWW0 RBS79512 7 - 0.571429
NA pWW0 RBS93037 5 - 0.6
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS109089 213 - 0.577465
NA pWW0 RBS30624 6 + 0.5
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS65391 387 - 0.666667
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS28779 645 - 0.590698
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS57028 2157 - 0.674548
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS64771 216 + 0.634259
NA pWW0 RBS16814 6 + 0.5
NA pWW0 RBS12148 9 + 0.555556
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS31820 237 + 0.57384
NA pWW0 RBS33694 7 - 0.428571
NA pWW0 RBS64192 7 - 0.714286
NA pWW0 RBS32625 7 + 0.571429
NA pWW0 RBS79362 6 + 0.333333
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS66416 354 - 0.60452
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS32072 417 + 0.563549
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS10361 303 - 0.561056
NA pWW0 RBS40815 7 + 0.428571
NA pWW0 RBS108727 6 - 0.833333
NA pWW0 RBS31804 7 + 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS3279 1275 + 0.591373
NA pWW0 RBS83827 5 + 0.8
NA pWW0 RBS109309 5 - 0.6
NA pWW0 RBS12559 7 + 0.428571
NA pWW0 RBS94445 7 - 0.571429
NA pWW0 RBS20163 7 + 0.428571
NA pWW0 RBS16145 7 + 0.428571
NA pWW0 RBS22081 6 + 0.333333
NA pWW0 RBS16371 5 + 0.6
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS8153 276 + 0.597826
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS8798 252 + 0.511905
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS9797 225 - 0.528889
NA pWW0 RBS2582 8 + 0.625
NA pWW0 RBS77726 8 + 0.5
NA pWW0 RBS29428 9 - 0.555556
NA pWW0 RBS61183 5 - 0.6
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS14385 1683 + 0.647653
NA pWW0 RBS8142 6 + 0.833333
NA putative transcriptional regulator proteinSubName: Full=Putative transcriptional regulator protein; pWW0 CDS22773 585 + 0.586325
NA pWW0 RBS7158 6 + 0.833333
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS20178 432 + 0.606481
NA pWW0 oriT96140 431 + 0.491879
NA pWW0 RBS10371 7 - 0.571429
NA pWW0 repeat_region75589 2059 + 0.591549
NA pWW0 RBS102208 6 - 0.666667
NA pWW0 RBS10027 7 - 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS79204 297 - 0.609428
NA putative transmembrane proteinSubName: Full=Putative transmembrane protein; pWW0 CDS63816 372 - 0.731183
NA pWW0 RBS110027 6 - 0.833333
NA unknownSubName: Full=Uncharacterized protein; pYQ39 CDS1283 939 + 0.629393
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS25062 423 + 0.654846
NA putative transcription regulator proteinSubName: Full=Putative transcription regulator protein; pWW0 CDS25666 297 - 0.616162
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS9046 498 + 0.624498
NA pWW0 RBS24195 7 + 0.714286
NA pWW0 RBS94969 8 - 0.625
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS56282 750 - 0.673333
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS21653 237 - 0.666667
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS8605 318 - 0.556604
NA putative transcription regulatorSubName: Full=Putative transcription regulator; pWW0 CDS26855 438 + 0.557078
NA pWW0 RBS30463 8 - 0.625
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS12857 1092 + 0.602564
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS11798 369 + 0.579946
NA pWW0 RBS38691 5 - 0.8
NA pWW0 RBS34226 7 - 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS83296 237 - 0.607595
NA putative cointegrate resolution protein SSubName: Full=Putative cointegrate resolution protein S; pWW0 CDS30642 972 + 0.598765
NA pWW0 RBS59192 6 - 0.5
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS63189 369 - 0.672087
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS61172 909 - 0.730473
NA pWW0 RBS36359 6 - 0.333333
NA putative ligaseSubName: Full=Putative ligase; pWW0 CDS7172 951 + 0.622503
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS24208 567 + 0.57672
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS40827 393 + 0.503817
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS92678 354 - 0.612994
NA pWW0 RBS3266 6 + 0.666667
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS94570 393 - 0.648855
NA pWW0 RBS103145 6 - 0.5
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS94966 720 - 0.561111
NA pWW0 RBS62077 17 - 0.647059
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS2313 294 + 0.571429
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS59727 1449 - 0.694272
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS22096 681 + 0.574156
NA pWW0 RBS65566 7 + 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS27294 303 - 0.557756
NA pWW0 RBS23405 7 + 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS20959 435 + 0.544828
NA pWW0 RBS10668 6 - 0.166667
NA putative drug resistance proteinSubName: Full=Putative drug resistance protein; pWW0 CDS83462 324 + 0.598765
NA pWW0 RBS8929 7 - 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS41013 363 - 0.553719
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS14091 243 + 0.617284
NA pWW0 RBS95693 7 - 0.428571
NA pWW0 RBS64760 4 + 1
NA pWW0 RBS87262 7 + 0.714286
NA unknownSubName: Full=Uncharacterized protein; pYQ39 CDS1061 363 - 0.647383
NA pWW0 RBS102775 7 - 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS12166 351 + 0.649573
NA pWW0 RBS12845 7 + 0.571429
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS12572 219 + 0.56621
NA putative integral membrane proteinSubName: Full=Putative integral membrane protein; pWW0 CDS34697 1653 - 0.547489
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS10062 303 - 0.577558
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS4575 735 + 0.591837
NA pWW0 RBS32053 6 + 0.333333
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS108704 393 - 0.564885
NA pWW0 RBS28694 6 - 0.666667
NA putative nucleaseSubName: Full=Putative nuclease; pWW0 CDS101566 633 - 0.567141
NA transposase subunit BSubName: Full=Transposase subunit B; pWW0 CDS33004 681 - 0.565345
NA pWW0 RBS4559 7 + 0.428571
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS113473 348 - 0.497126
NA pWW0 RBS25048 7 + 0.714286
NA putative nucleaseSubName: Full=Putative nuclease; pWW0 CDS102212 558 - 0.603943
NA pWW0 RBS17250 6 + 1
NA pWW0 RBS63828 6 - 0.666667
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS10865 780 + 0.564103
NA unknownSubName: Full=Uncharacterized protein; pYQ39 CDS1448 411 - 0.63017
NA pWW0 RBS27605 8 - 0.5
NA putative reductase proteinSubName: Full=Putative reductase protein; pWW0 CDS23417 777 + 0.564994
NA pWW0 RBS25968 6 - 0.666667
NA pWW0 RBS14371 6 + 0.666667
NA putative cointegrate resolution protein TSubName: Full=Putative cointegrate resolution protein T; pWW0 CDS29463 999 - 0.602603
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS19290 828 + 0.608696
NA transposase subunit ASubName: Full=Transposase subunit A; pWW0 CDS33906 312 - 0.63141
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS65577 237 + 0.687764
NA putative multidrug exporterSubName: Full=Putative multidrug exporter; pWW0 CDS83838 333 + 0.555556
NA pWW0 misc_feature41212 15048 - 0.6042
NA putative transmembrane proteinSubName: Full=Putative transmembrane protein; pWW0 CDS63580 240 - 0.670833
NA pWW0 RBS93487 4 - 0.75
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS32638 330 + 0.518182
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS16383 441 + 0.560091
NA pWW0 RBS2300 7 + 0.571429
NA pWW0 RBS113832 7 - 0.571429
NA pWW0 RBS39691 5 + 0.6
NA pWW0 RBS41385 5 - 0.8
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS62077 804 - 0.692786
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS28320 369 - 0.598916
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS93649 792 - 0.589646
NA pWW0 RBS83446 6 + 1
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS38063 624 - 0.625
NA pWW0 RBS10850 7 + 0.571429
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS16824 396 + 0.535354
NA pWW0 RBS63567 6 - 0.666667
NA pWW0 RBS19277 6 + 0.5
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS2596 510 + 0.586275
NA putative transmembrane proteinSubName: Full=Putative transmembrane protein; pWW0 CDS79375 360 + 0.533333
NA pWW0 RBS65782 8 - 0.625
NA putative transmembrane proteinSubName: Full=Putative cation-efflux family protein; SubName: Full=Putative membrane/transport protein; SubName: Full=Putative transmembrane protein; pWW0 CDS86282 897 - 0.574136
NA pWW0 RBS66776 6 - 0.666667
NA pWW0 RBS109104 5 - 0.6
NA pWW0 RBS83538 7 - 0.428571
NA pWW0 repeat_region36833 1277 + 0.595928
NA pWW0 RBS8781 7 + 0.571429
NA pWW0 RBS27915 7 -
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS102804 336 - 0.58631
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS27597 312 - 0.557692
NA hypothetical proteinSubName: Full=Uncharacterized protein; pWW0 CDS16158 222 + 0.558559
NA pWW0 RBS57039 7 - 0.571429
NA pWW0 RBS22758 8 + 0.375
KorA pWW0 RBS116168 6 + 0.333333
ORF15 pWW0 RBS9032 6 + 1
dgkA pWW0 RBS36788 6 - 0.666667
dgkA putative diacylglycerol kinaseSubName: Full=Putative diacylglycerol kinase; pWW0 CDS36384 396 - 0.522727
korA putative KorA proteinSubName: Full=Putative KorA protein; pWW0 CDS116181 351 + 0.618234
korA2 putative transcriptional repressorSubName: Full=Putative transcriptional repressor; pWW0 CDS20626 315 + 0.593651
korA2 pWW0 RBS20614 5 + 0.6
lspA pWW0 RBS86286 6 - 0.666667
lspA putative lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; pWW0 CDS85766 513 - 0.502924
merB pWW0 RBS88317 6 - 0.5
merB truncated MerB proteinSubName: Full=Truncated MerB protein; pWW0 CDS87763 546 - 0.613553
merR pWW0 RBS88389 4 + 0.75
merR putative MerR proteinSubName: Full=Putative MerR protein; pWW0 CDS88402 435 + 0.616092
mpfA pWW0 RBS113464 5 - 0.6
mpfA putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS112995 462 - 0.536797
mpfB pWW0 RBS112993 7 - 0.571429
mpfB putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS112690 297 - 0.481481
mpfC Putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS110019 2685 - 0.573184
mpfC pWW0 RBS112712 7 - 0.714286
mpfD putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS109330 690 - 0.572464
mpfE putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS107853 864 - 0.540509
mpfF putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS107189 681 - 0.537445
mpfF pWW0 RBS107882 5 - 0.6
mpfG putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS106378 786 - 0.569975
mpfG pWW0 RBS107169 6 - 0.333333
mpfH pWW0 RBS106383 7 - 1
mpfH putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS105110 1266 - 0.623223
mpfI putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS104069 1032 - 0.584302
mpfI pWW0 RBS105107 5 - 0.6
mpfJ pWW0 RBS104127 7 - 0.571429
mpfJ putative mating pair formation proteinSubName: Full=Putative mating pair formation protein; pWW0 CDS103168 948 - 0.605485
oriV pWW0 rep_origin1460 241 + 0.489627
parA pWW0 RBS114074 5 + 0.6
parA putative ParA proteinSubName: Full=Putative ParA protein; pWW0 CDS114084 1146 + 0.569808
parB pWW0 RBS115228 5 + 0.6
parB putative ParB proteinSubName: Full=Putative ParB protein; pWW0 CDS115240 945 + 0.551323
parC pWW0 RBS116514 5 + 0.4
parC SubName: Full=ParC protein; Flags: Fragment; pWW0 CDS116528 53 + 0.54717
parC SubName: Full=ParC protein; Flags: Fragment; pWW0 CDS1 355 + 0.560563
recX pWW0 RBS17878 6 + 0.5
recX putative regulatory proteinRecName: Full=Regulatory protein RecX; pWW0 CDS17890 393 + 0.575064
rep SubName: Full=Rep protein; pWW0 CDS1730 555 + 0.585586
rep pWW0 RBS1720 6 + 0.666667
res pWW0 RBS625 7 + 0.571429
res SubName: Full=Res protein; pWW0 CDS638 636 + 0.586478
ruvA pWW0 RBS7039 8 - 0.625
ruvA SubName: Full=RuvA protein; pWW0 CDS6603 432 - 0.592593
ruvB SubName: Full=RuvB protein; pWW0 CDS5405 1209 - 0.598842
ruvB pWW0 RBS6625 6 - 0.666667
ssb pWW0 RBS18294 7 + 0.428571
ssb putative SSB proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; pWW0 CDS18307 543 + 0.609576
tnpA putative IS1246 transposaseSubName: Full=Putative IS1246 transposase; pWW0 CDS37106 843 + 0.600237
tnpA pWW0 RBS89652 6 + 0.666667
tnpA putative transposaseSubName: Full=Putative transposase; pWW0 CDS39708 882 + 0.554422
tnpA Tn4651 transposaseSubName: Full=Tn4651 transposase; pWW0 CDS80122 3006 - 0.583167
tnpA pWW0 RBS37096 6 + 0.666667
tnpA pWW0 RBS85674 5 - 0.6
tnpA putative transposaseSubName: Full=Putative transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Transposase TnpA; pWW0 CDS84455 1215 - 0.602469
tnpA Tn4653 transposaseSubName: Full=Tn4653 transposase; pWW0 CDS89665 2967 + 0.648466
tnpA pWW0 RBS76141 5 + 0.6
tnpA pWW0 RBS83136 6 - 0.833333
tnpC pWW0 RBS80118 6 - 0.666667
tnpC putative tnpA repressor TnpCSubName: Full=Putative tnpA repressor TnpC; SubName: Full=Putative tpnA repressor protein; SubName: Full=TnpC protein; pWW0 CDS79751 363 - 0.561983
tnpR pWW0 RBS89090 7 + 0.428571
tnpR Tn4653 resolvaseSubName: Full=Tn4653 resolvase; pWW0 CDS89101 561 + 0.650624
tnpR putative resolvaseSubName: Full=Putative resolvase; pWW0 CDS26107 663 - 0.613876
tnpR pWW0 RBS26781 8 - 0.75
traA pWW0 RBS96560 6 + 0.666667
traA putative TraA proteinSubName: Full=Putative TraA protein; pWW0 CDS96571 384 + 0.580729
traB pWW0 RBS96942 7 + 0.571429
traB putative traB proteinSubName: Full=Putative traB protein; pWW0 CDS96954 1551 + 0.577692
traC putative TraC proteinSubName: Full=Putative TraC protein; pWW0 CDS98516 2937 + 0.59857
traC pWW0 RBS98504 6 + 0.833333
traD putative TraD proteinSubName: Full=Putative TraD protein; pWW0 CDS95682 456 - 0.58114
traD pWW0 RBS96145 7 - 0.571429
xylA SubName: Full=XylA protein; pWW0 CDS69980 1053 - 0.509022
xylB SubName: Full=XylB protein; pWW0 CDS68684 1101 - 0.515895
xylC SubName: Full=XylC protein; pWW0 CDS72319 1464 - 0.519126
xylE SubName: Full=XylE protein; pWW0 CDS50914 924 - 0.574675
xylF SubName: Full=XylF protein; pWW0 CDS48563 846 - 0.671395
xylG SubName: Full=XylG protein; pWW0 CDS49419 1461 - 0.666667
xylH RecName: Full=2-hydroxymuconate tautomerase; EC=5.3.2.6; AltName: Full=4-oxalocrotonate tautomerase; Short=4-OT; pWW0 CDS44734 192 - 0.614583
xylI SubName: Full=XylI protein; pWW0 CDS44975 795 - 0.633962
xylJ SubName: Full=XylJ protein; pWW0 CDS47883 669 - 0.651719
xylK RecName: Full=4-hydroxy-2-oxovalerate aldolase; Short=HOA; EC=4.1.3.39; AltName: Full=4-hydroxy-2-keto-pentanoic acid aldolase; AltName: Full=4-hydroxy-2-oxopentanoate aldolase; pWW0 CDS45766 1038 - 0.631985
xylL SubName: Full=XylL protein; pWW0 CDS52317 810 - 0.625926
xylM SubName: Full=XylM protein; pWW0 CDS71182 1110 - 0.48018
xylN SubName: Full=XylN protein; pWW0 CDS67174 1398 - 0.504292
xylQ RecName: Full=Acetaldehyde dehydrogenase; EC=1.2.1.10; AltName: Full=Acetaldehyde dehydrogenase [acetylating]; pWW0 CDS46814 939 - 0.612354
xylR SubName: Full=XylR protein; pWW0 CDS41437 1701 - 0.579659
xylS SubName: Full=XylS protein; pWW0 CDS43584 966 + 0.52381
xylT SubName: Full=XylT protein; pWW0 CDS51834 339 - 0.625369
xylU SubName: Full=XylU; SubName: Full=XylU protein; pWW0 CDS74987 396 - 0.527778
xylW SubName: Full=Benzyl alcohol dehydrogenase II; EC=1.1.1.90; SubName: Full=XylW protein; pWW0 CDS73814 1047 - 0.526266
xylX SubName: Full=XylX protein; pWW0 CDS54750 1365 - 0.593407
xylY SubName: Full=XylY protein; pWW0 CDS54261 489 - 0.560327
xylZ SubName: Full=XylZ protein; pWW0 CDS53241 1011 - 0.613254