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2024-05-14 12:57:20

Gene list

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Organism: Escherichia coli O157:H7, EDL933
Gene type: CDS

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
EHEC-hlyA hemolysin toxin proteinpO157 CDS39822 2997 + 0.39306
EHEC-hlyB hemolysin transport proteinpO157 CDS42868 2121 + 0.37388
EHEC-hlyC hemolysin transport proteinpO157 CDS39305 516 + 0.348837
EHEC-hlyD hemolysin transport proteinpO157 CDS44992 1440 + 0.365972
L7002 unknownpO157 CDS698 252 + 0.587302
L7003 hypothetical protein 15.6 kDa protein in finO 3' region precursorpO157 CDS1151 462 + 0.491342
L7004 putative hemolysin expression modulating proteinpO157 CDS1658 210 + 0.357143
L7005 hypothetical proteinpO157 CDS1905 339 + 0.486726
L7007 replication initiation proteinpO157 CDS2973 75 + 0.48
L7009 replication proteinpO157 CDS4259 195 + 0.54359
L7010 unknownpO157 CDS4810 285 + 0.547368
L7011 hypothetical proteinpO157 CDS5094 276 + 0.485507
L7012 unknownpO157 CDS5440 288 - 0.340278
L7013 transposase (partial)pO157 CDS5755 222 - 0.536036
L7014 hypothetical proteinpO157 CDS6029 735 - 0.519728
L7015 transposasepO157 CDS6547 510 - 0.558824
L7016 unknownpO157 CDS7041 240 + 0.529167
L7018 hypothetical proteinpO157 CDS9627 390 + 0.379487
L7019 transposasepO157 CDS10174 888 + 0.536036
L7021 unknownpO157 CDS15307 108 - 0.435185
L7023 hypothetical proteinpO157 CDS16148 150 - 0.486667
L7024 regulatory proteinpO157 CDS16587 135 + 0.474074
L7025 unknownpO157 CDS16882 174 + 0.442529
L7026 hypothetical proteinpO157 CDS17323 822 + 0.456204
L7027 hypothetical proteinpO157 CDS18147 1104 + 0.508152
L7028 hypothetical proteinpO157 CDS19340 1722 + 0.479094
L7029 putative acyltransferasepO157 CDS21102 1032 + 0.475775
L7030 unknownpO157 CDS22421 174 + 0.45977
L7031 hypothetical proteinpO157 CDS23016 2697 + 0.447905
L7045 hypothetical proteinpO157 CDS37557 342 + 0.450292
L7046 ORFB of IS911pO157 CDS37943 822 + 0.530414
L7051 hypothetical proteinpO157 CDS46498 195 + 0.271795
L7052 hypothetical proteinpO157 CDS46722 285 + 0.333333
L7053 hypothetical serine-threonine protein kinasepO157 CDS47175 231 + 0.437229
L7054 replication proteinpO157 CDS47910 357 + 0.585434
L7055 replication proteinpO157 CDS47955 318 - 0.584906
L7056 replication proteinpO157 CDS48551 954 - 0.525157
L7057 replication proteinpO157 CDS49266 330 + 0.49697
L7058 hypothetical proteinpO157 CDS49936 237 - 0.510549
L7059 hypothetical proteinpO157 CDS50133 621 - 0.521739
L7060 hypothetical proteinpO157 CDS50750 684 - 0.69152
L7061 hypothetical proteinpO157 CDS51489 195 + 0.502564
L7066 hypothetical proteinpO157 CDS54198 327 - 0.541284
L7067 Rep protein E1pO157 CDS54669 156 + 0.49359
L7070 hypothetical proteinpO157 CDS57934 273 + 0.615385
L7071 unknownpO157 CDS58290 297 - 0.498316
L7072 unknownpO157 CDS58849 1725 + 0.470725
L7073 unknownpO157 CDS60650 903 + 0.547065
L7074 hypothetical proteinpO157 CDS61938 684 + 0.571637
L7075 unknownpO157 CDS62737 555 + 0.565766
L7076 unknownpO157 CDS63337 777 + 0.611326
L7077 unknownpO157 CDS64531 426 + 0.542253
L7078 unknownpO157 CDS65003 423 + 0.555556
L7079 unknownpO157 CDS65583 531 - 0.619586
L7080 unknownpO157 CDS66627 261 - 0.609195
L7081 unknownpO157 CDS66891 1362 + 0.571219
L7082 unknownpO157 CDS68299 564 + 0.586879
L7083 unknownpO157 CDS68948 456 - 0.600877
L7085 hypothetical proteinpO157 CDS70187 261 + 0.517241
L7086 hypothetical proteinpO157 CDS70453 2019 + 0.583952
L7091 putative nickasepO157 CDS74290 1974 + 0.519757
L7092 hypothetical proteinpO157 CDS76331 432 + 0.444444
L7093 putative transposasepO157 CDS77322 360 - 0.511111
L7094 transposasepO157 CDS77863 411 + 0.50365
L7095 putative cytotoxinpO157 CDS78542 9510 + 0.313775
L7096 putative transposasepO157 CDS88143 273 + 0.534799
L7097 hypothetical proteinpO157 CDS88342 504 - 0.517857
ccdA plasmid maintenance proteinpO157 CDS51892 219 + 0.506849
ccdB plasmid maintenance proteinpO157 CDS52112 306 + 0.503268
cpb2 CopB protein (RepA2 protein)pO157 CDS2483 255 + 0.439216
espP putative exoprotein-precursorpO157 CDS11242 3903 + 0.442993
etpC type II secretion proteinpO157 CDS25799 876 + 0.423516
etpD type II secretion proteinpO157 CDS26714 1929 + 0.503888
etpE type II secretion proteinpO157 CDS28642 1506 + 0.536521
etpF type II secretion proteinpO157 CDS30149 1224 + 0.565359
etpG type II secretion proteinpO157 CDS31403 435 + 0.514943
etpH type II secretion proteinpO157 CDS31834 555 + 0.533333
etpI type II secretion proteinpO157 CDS32385 366 + 0.579235
etpJ type II secretion proteinpO157 CDS32747 600 + 0.548333
etpK type II secretion proteinpO157 CDS33343 978 + 0.53681
etpL type II secretion proteinpO157 CDS34254 1278 + 0.56651
etpM type II secretion proteinpO157 CDS35518 513 + 0.530214
etpN type II secretion proteinpO157 CDS36088 834 + 0.527578
etpO type II secretion proteinpO157 CDS37013 402 + 0.447761
finO fertility inhibition protein (conjugal transfer repressor)pO157 CDS1 561 + 0.566845
flmA stable plasmid inheritance proteinpO157 CDS73950 159 + 0.471698
flmC hypothetical proteinpO157 CDS73892 213 + 0.483568
insA transposasepO157 CDS15609 273 - 0.494505
katP EHEC-catalase/peroxidasepO157 CDS7373 2211 + 0.456807
psb1 putative regulator of SOS inductionpO157 CDS72523 438 + 0.570776
psiA hypothetical proteinpO157 CDS72957 762 + 0.589239
redF resolvase (protein d)pO157 CDS52418 807 + 0.568773
rep2 replication initiation proteinpO157 CDS3040 858 + 0.575758
sopA plasmid partitioning proteinpO157 CDS55412 1167 + 0.471294
sopB plasmid partitioning proteinpO157 CDS56578 972 + 0.459877
ssb single strand binding proteinpO157 CDS69666 492 + 0.575203
tra6 transposasepO157 CDS53311 891 - 0.539843
traI DNA helicasepO157 CDS88992 1299 + 0.618938
traX acetylase for F pilinpO157 CDS90310 747 + 0.580991
ypt2 hypothetical protein 31.7 kDa protein in traX-finO intergenic regionpO157 CDS91115 861 + 0.444832