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2024-04-26 05:07:55

Gene list

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Organism: Yersinia pestis KIM, KIM5

Number of genes found: 91

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM5
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pCD1 repeat_region50753 1235 + 0.509312
NA pCD1 repeat_region70056 391 + 0.473146
NA pCD1 repeat_region11939 3863 + 0.474502
NA pCD1 repeat_region61231 6302 + 0.448905
NA pCD1 repeat_region63528 3054 + 0.501965
NA pCD1 rep_origin1741 1195 + 0.50795
NA pCD1 repeat_region54971 270 + 0.511111
NA pCD1 promoter52628 102 + 0.264706
NA pCD1 repeat_region61336 1214 + 0.499176
NA pCD1 repeat_region12609 1954 + 0.51433
NA pCD1 repeat_region58749 1670 + 0.550898
NA copApCD1 misc_RNA1560 90 - 0.466667
'yadA pCD1 pseudo67900 936 + 0.424145
Y0001 unknownpCD1 CDS57 312 + 0.557692
Y0006 unknownpCD1 CDS3427 219 - 0.488584
Y0008 unknownpCD1 CDS4758 429 + 0.447552
Y0012 unknownpCD1 CDS9858 207 + 0.608696
Y0014 putative transposasepCD1 CDS12265 372 - 0.454301
Y0016 putative transposasepCD1 CDS13714 783 + 0.50447
Y0044 unknownpCD1 CDS33973 372 + 0.526882
Y0045 unknownpCD1 CDS34341 369 + 0.495935
Y0046 unknownpCD1 CDS34706 345 + 0.46087
Y0055 putative transposasepCD1 CDS42220 132 - 0.462121
Y0056 unknownpCD1 CDS42386 324 - 0.388889
Y0058 unknownpCD1 CDS42878 210 + 0.428571
Y0061 unknownpCD1 CDS44952 120 - 0.475
Y0062 unknownpCD1 CDS45946 420 - 0.388095
Y0063 unknownpCD1 CDS46637 390 + 0.276923
Y0068 unknownpCD1 CDS50819 324 + 0.481481
Y0070 unknownpCD1 CDS51733 198 + 0.5
Y0074 unknownpCD1 CDS56087 276 + 0.431159
Y0075 unknownpCD1 CDS56355 300 + 0.38
Y0076 unknownpCD1 CDS56496 297 - 0.373737
Y0084 putative IS1617 transposasepCD1 CDS62202 267 - 0.479401
Y0085 unknownpCD1 CDS62568 330 - 0.281818
Y0086 unknownpCD1 CDS63036 465 - 0.301075
Y0087 putative resolvasepCD1 CDS63519 552 - 0.46558
Y0093 putative DNA helicasepCD1 CDS69466 492 + 0.554878
Y0094 unknownpCD1 CDS70123 324 + 0.487654
lcrD secretion proteinpCD1 CDS35037 2115 + 0.463357
lcrE secretion control proteinpCD1 CDS32846 882 + 0.461451
lcrF LCR activatorpCD1 CDS23907 816 - 0.416667
lcrG V-antigenpCD1 CDS37630 288 + 0.46875
lcrH YopBD chaperonepCD1 CDS38912 507 + 0.441815
lcrQ LCR negative regulatorpCD1 CDS15801 348 - 0.479885
lcrR unknownpCD1 CDS37148 441 + 0.489796
lcrS putative IS element proteinpCD1 CDS14987 267 - 0.434457
lcrT putative transposasepCD1 CDS14547 405 - 0.454321
lcrV Yop secretion and targeting control proteinpCD1 CDS37919 981 + 0.377166
nuc endonucleasepCD1 CDS665 369 + 0.487805
repA replication proteinpCD1 CDS1734 867 + 0.542099
repB replication proteinpCD1 CDS1171 255 + 0.423529
sopA sopAB transcription repressorpCD1 CDS52730 1167 + 0.441302
sopB plasmid partitioning control proteinpCD1 CDS53896 963 + 0.417445
sycE YopE chaperonepCD1 CDS57647 393 + 0.409669
sycH YopH chaperonepCD1 CDS60796 426 + 0.41784
sycT YopT chaperonepCD1 CDS47070 399 - 0.411028
tap repA translation proteinpCD1 CDS1667 75 + 0.44
tyeA Yop secretion and targeting control proteinpCD1 CDS33708 279 + 0.433692
yadA' pCD1 pseudo67532 252 + 0.420635
ylpA pCD1 pseudo50089 630 + 0.487302
yopB Yop targeting proteinpCD1 CDS39396 1206 + 0.466833
yopD Yop targeting negative regulatorpCD1 CDS40620 921 + 0.431053
yopE targeted effectorpCD1 CDS56794 660 - 0.510606
yopH targeted effector proteinpCD1 CDS10347 1407 + 0.474058
yopJ targeted effector proteinpCD1 CDS7798 867 + 0.347174
yopK Yop targeting proteinpCD1 CDS48936 549 + 0.335155
yopM Yop targeted effector proteinpCD1 CDS43481 1230 + 0.389431
yopT Yop targeted effectorpCD1 CDS47468 969 - 0.431373
ypkA secreted protein kinasepCD1 CDS5204 2199 + 0.481128
yscA unknownpCD1 CDS23730 99 - 0.313131
yscB unknownpCD1 CDS23091 414 - 0.417874
yscC type III secretion proteinpCD1 CDS21262 1824 - 0.454496
yscD type III secretion proteinpCD1 CDS20006 1260 - 0.46746
yscE type III secretion proteinpCD1 CDS19809 201 - 0.422886
yscF type III secretion proteinpCD1 CDS19545 264 - 0.416667
yscG type III secretion proteinpCD1 CDS19196 348 - 0.439655
yscH secreted proteinpCD1 CDS18702 498 - 0.429719
yscI type III secretion proteinpCD1 CDS18354 348 - 0.468391
yscJ type III secretion proteinpCD1 CDS17613 735 - 0.428571
yscK type III secretion proteinpCD1 CDS16984 630 - 0.485714
yscL type III secretion proteinpCD1 CDS16373 666 - 0.448949
yscN Yops secretion proteinpCD1 CDS31329 1320 - 0.508333
yscO type III secretion proteinpCD1 CDS30868 465 - 0.458065
yscP type III secretion proteinpCD1 CDS29501 1368 - 0.486842
yscQ type III secretion proteinpCD1 CDS28581 924 - 0.481602
yscR type III secretion proteinpCD1 CDS27931 654 - 0.43578
yscS type III secretion proteinpCD1 CDS27663 267 - 0.453184
yscT type III secretion proteinpCD1 CDS26881 786 - 0.428753
yscU type III secretion proteinpCD1 CDS25817 1065 - 0.431925
yscW YscC lipoprotein chaperonepCD1 CDS24846 396 - 0.444444