Gene list
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Organism: Staphylococcus aureus
Number of genes found: 291
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| Staphylococcus aureus | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | pC221 | misc_signal | 3033 | 27 | + | 0.481481 | |||
| NA | VRA0062 | helix-turn-helix domain protein | SubName: Full=Helix-turn-helix domain protein; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 57349 | 261 | - | 0.321839 |
| NA | unknown | SubName: Full=Similar to Teicoplanin resistance associated membrane protein TcaA; SubName: Full=Teicoplanin resistance associated membrane protein TcaA-like protein; SubName: Full=Uncharacterized protein; Flags: Precursor; | pSK41 | CDS | 755 | 1272 | + | 0.243711 | |
| NA | RecName: Full=Uncharacterized protein C; | pC221 | CDS | 4289 | 269 | + | 0.405204 | ||
| NA | MobA | SubName: Full=MobA; SubName: Full=Rlx protein; SubName: Full=Rlx protein, putative; | pC223 | CDS | 2342 | 993 | + | 0.364552 | |
| NA | pC223 | rep_origin | 4577 | 66 | + | 0.409091 | |||
| NA | orfD | RecName: Full=Uncharacterized protein ORFD; | pS194 | CDS | 2121 | 690 | + | 0.349275 | |
| NA | ORF (repE) | RecName: Full=Replication initiation protein; | pS194 | CDS | 3371 | 945 | + | 0.306878 | |
| NA | RecName: Full=Chloramphenicol acetyltransferase; Short=CAT; EC=2.3.1.28; | pC221 | CDS | 2267 | 648 | + | 0.251543 | ||
| NA | VRA0022 | IS431mec transposase | SubName: Full=IS257 transposase TnpE; SubName: Full=IS431mec transposase; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpD; SubName: Full=Putative transposase TnpE; SubName: Full=TnpE; SubName: Full=Transposase; | pLW043 | CDS | 18317 | 675 | + | 0.340741 |
| NA | pT181 | repeat_region | 790 | 8 | + | 0.375 | |||
| NA | SubName: Full=S.aureus plasmid pE194 ORFs A,B,C,D,E, and F; Flags: Fragment; | pE194 | CDS | 857 | 318 | - | 0.320755 | ||
| NA | pC221 | misc_feature | 2981 | 79 | + | 0.392405 | |||
| NA | pC221 | repeat_unit | 1167 | 11 | + | 0.363636 | |||
| NA | VRA0044 | hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 38307 | 615 | + | 0.271545 |
| NA | pE194 | conflict | 1871 | 1 | + | ||||
| NA | CAT | RecName: Full=Chloramphenicol acetyltransferase; EC=2.3.1.28; | pC223 | CDS | 1000 | 648 | + | 0.240741 | |
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 7323 | 1467 | - | 0.310157 | |
| NA | pT181 | repeat_region | 5228 | 8 | + | 0.375 | |||
| NA | VRA0053 | resolvase | SubName: Full=Putative resolvase Res; SubName: Full=Resolvase; SubName: Full=Resolvase/integrase; | pLW043 | CDS | 47565 | 558 | + | 0.31362 |
| NA | pC223 | variation | 797 | 1 | + | ||||
| NA | pUB101 | misc_feature | 5616 | 174 | + | 0.33908 | |||
| NA | LtrC-like protein | SubName: Full=LtrC-like protein; SubName: Full=Putative LtrC-like protein; | pSK41 | CDS | 6350 | 1725 | + | 0.271304 | |
| NA | RecName: Full=Uncharacterized protein C; | pC221 | CDS | 4287 | 269 | + | 0.405204 | ||
| NA | pSN2 | -10_signal | 738 | 7 | - | 0.142857 | |||
| NA | 21kb plasmid | repeat_region | 477 | 6546 | + | 0.284601 | |||
| NA | unknown | SubName: Full=Acetyltransferase, GNAT family; SubName: Full=Putative acetyltransferase; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 42112 | 393 | + | 0.246819 | |
| NA | unknown | SubName: Full=DNA recombination protein RmuC; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 10316 | 273 | + | 0.212454 | |
| NA | unknown | SubName: Full=Uncharacterized protein; | pSK41 | CDS | 72 | 615 | + | 0.273171 | |
| NA | VRA0025 | hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 20551 | 222 | - | 0.238739 |
| NA | VRA0046 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 40303 | 417 | - | 0.278177 |
| NA | putative membrane protein | SubName: Full=Membrane protein, putative; SubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 10692 | 234 | + | 0.252137 | |
| NA | pSK3 | repeat_region | 351 | 225 | + | 0.453333 | |||
| NA | pC221 | repeat_unit | 978 | 16 | + | 0.375 | |||
| NA | RecName: Full=23S rRNA methylase leader peptide; AltName: Full=Erythromycin resistance leader peptide; | pE194 | CDS | 2798 | 60 | - | 0.266667 | ||
| NA | pC221 | repeat_unit | 3034 | 9 | + | 0.555556 | |||
| NA | unknown | SubName: Full=Helix-turn-helix domain protein; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 12564 | 261 | - | 0.321839 | |
| NA | pUB101 | rep_origin | 3749 | 220 | + | 0.281818 | |||
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 17678 | 513 | - | 0.274854 | |
| NA | pC221 | repeat_unit | 962 | 15 | + | 0.266667 | |||
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 9645 | 258 | - | 0.27907 | |
| NA | unknown | SubName: Full=Uncharacterized protein; | pSK41 | CDS | 4531 | 1617 | + | 0.248609 | |
| NA | VRA0052 | ATP-binding protein, putative | SubName: Full=ATP-binding protein p271; SubName: Full=ATP-binding protein, putative; SubName: Full=Potential ATP-binding protein; | pLW043 | CDS | 46479 | 816 | + | 0.300245 |
| NA | pC221 | repeat_unit | 1184 | 11 | + | 0.454545 | |||
| NA | VRA0002 | IS431mec transposase | SubName: Full=IS431mec transposase; SubName: Full=IS431mec-like transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Putative transposase TnpB; SubName: Full=Putative transposase TnpD; SubName: Full=Transposase; SubName: Full=Transposase TnpB; | pLW043 | CDS | 1179 | 675 | + | 0.346667 |
| NA | pC221 | repeat_unit | 3050 | 2 | - | 0.5 | |||
| NA | RepJ | SubName: Full=RepJ; | pC223 | CDS | 4528 | 945 | + | 0.301587 | |
| NA | pSN2 | RBS | 709 | 7 | - | 0.571429 | |||
| NA | RecName: Full=Plasmid recombination enzyme type 1; AltName: Full=Mobilization protein; AltName: Full=Plasmid recombinase; | pE194 | CDS | 3150 | 1212 | + | 0.355611 | ||
| NA | SubName: Full=Staphylococcus aureus plasmid pC221 complete DNA sequence; SubName: Full=Staphylococcus plasmid pC221; Flags: Fragment; | pC221 | CDS | 1 | 424 | + | 0.320755 | ||
| NA | pSK3 | repeat_region | 153 | 158 | + | 0.367089 | |||
| NA | pC221 | misc_feature | 3034 | 27 | + | 0.481481 | |||
| NA | RecName: Full=Uncharacterized 12.4 kDa protein; AltName: Full=Reading frame C; | pE194 | CDS | 1506 | 354 | + | 0.30226 | ||
| NA | pUB101 | repeat_region | 583 | 15 | + | 0.466667 | |||
| NA | pC221 | repeat_unit | 3033 | 9 | + | 0.555556 | |||
| NA | pC221 | variation | 1129 | 1 | + | 1 | |||
| NA | VRA0054 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 48404 | 780 | + | 0.251282 |
| NA | ORF (str) | RecName: Full=Streptomycin resistance protein; | pS194 | CDS | 4323 | 849 | + | 0.248528 | |
| NA | pC223 | misc_feature | 1869 | 2 | + | 1 | |||
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 6494 | 837 | - | 0.308244 | |
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 18348 | 459 | - | 0.270153 | |
| NA | pC221 | repeat_unit | 3088 | 7 | + | 0.428571 | |||
| NA | pC221 | repeat_unit | 1260 | 10 | + | 0.5 | |||
| NA | VRA0050 | DNA invertase | SubName: Full=DNA invertase; SubName: Full=DNA-invertase; SubName: Full=Resolvase/integrase Bin; | pLW043 | CDS | 44479 | 594 | + | 0.341751 |
| NA | pC221 | promoter | 2150 | 6 | + | ||||
| NA | VRA0034 | IS431mec transposase | SubName: Full=IS431mec transposase; | pLW043 | CDS | 26648 | 762 | + | 0.360892 |
| NA | pOX7 | repeat_unit | 7211 | 8 | + | 0.125 | |||
| NA | pC221 | RBS | 1187 | 5 | + | 0.6 | |||
| NA | tetracycline resistance protein | SubName: Full=Tetracycline resistance protein; | pT181 | CDS | 1932 | 888 | + | 0.280405 | |
| NA | pC223 | rep_origin | 3968 | 154 | - | 0.396104 | |||
| NA | pC221 | misc_feature | 2831 | 3 | + | 0.333333 | |||
| NA | ORF64 | SubName: Full=ORF64; SubName: Full=Uncharacterized protein; | pSK6 | CDS | 1261 | 195 | + | 0.271795 | |
| NA | pSK6 | repeat_region | 265 | 243 | + | 0.452675 | |||
| NA | RecName: Full=Protein rlx; | pC221 | CDS | 3608 | 948 | + | 0.367089 | ||
| NA | pC223 | variation | 1952 | 1 | + | 1 | |||
| NA | unknown | pSK41 | mat_peptide | 863 | 1161 | + | 0.243755 | ||
| NA | VRA0036 | Tn1546 resolvase | SubName: Full=Tn1546 resolvase; | pLW043 | CDS | 30507 | 576 | + | 0.338542 |
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 19942 | 213 | + | 0.258216 | |
| NA | pC223 | variation | 2162 | 1 | + | ||||
| NA | unknown | SubName: Full=Uncharacterized protein; | pSK41 | CDS | 2068 | 417 | - | 0.280576 | |
| NA | unknown | SubName: Full=Conserved domain protein; SubName: Full=DNA-binding protein ParR; SubName: Full=Plasmid segregation protein ParR; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 12231 | 330 | + | 0.330303 | |
| NA | pC221 | RBS | 2254 | 4 | + | 0.75 | |||
| NA | pC221 | variation | 1149 | 1 | + | 1 | |||
| NA | beta-lactamase | SubName: Full=Beta-lactamase; | pOX7 | CDS | 1430 | 861 | + | 0.491289 | |
| NA | pC221 | promoter | 2172 | 6 | + | ||||
| NA | pC221 | RBS | 2252 | 6 | + | 0.666667 | |||
| NA | unknown | SubName: Full=Uncharacterized protein; | pSK41 | CDS | 3618 | 780 | + | 0.251282 | |
| NA | pC221 | repeat_unit | 1287 | 7 | + | 0.428571 | |||
| NA | pC221 | misc_feature | 2186 | 1 | + | ||||
| NA | ORF (rlx) | RecName: Full=Protein rlx; | pS194 | CDS | 1424 | 963 | + | 0.356179 | |
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 20186 | 609 | + | 0.228243 | |
| NA | SubName: Full=Replication and maintenance protein; SubName: Full=Staphylococcus aureus plasmid pSN2 Includes an unknown protein; | pSN2 | CDS | 225 | 477 | - | 0.341719 | ||
| NA | VRA0061 | conserved domain protein | SubName: Full=Conserved domain protein; SubName: Full=DNA-binding protein ParR; SubName: Full=Plasmid segregation protein ParR; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 57016 | 330 | + | 0.330303 |
| NA | pC221 | repeat_unit | 1029 | 16 | + | 0.5625 | |||
| NA | pC221 | repeat_unit | 3098 | 7 | + | 0.428571 | |||
| NA | RecName: Full=Chloramphenicol acetyltransferase; Short=CAT; EC=2.3.1.28; | pC194 | CDS | 1260 | 651 | + | 0.304147 | ||
| NA | pE194 | conflict | 2615 | 3 | + | 0.333333 | |||
| NA | RecName: Full=Protein rlx; | pC221 | CDS | 3609 | 949 | + | 0.367756 | ||
| NA | RecName: Full=Protein cop; | pC194 | CDS | 708 | 384 | + | 0.294271 | ||
| NA | pC221 | repeat_unit | 1053 | 15 | + | 0.466667 | |||
| NA | VRA0045 | conserved hypothetical protein | SubName: Full=Similar to Teicoplanin resistance associated membrane protein TcaA; SubName: Full=Teicoplanin resistance associated membrane protein TcaA-like protein; SubName: Full=Uncharacterized protein; Flags: Precursor; | pLW043 | CDS | 38990 | 1272 | + | 0.243711 |
| NA | VRA0051 | Tn552 transposase | SubName: Full=Tn552 transposase; | pLW043 | CDS | 45044 | 1443 | + | 0.318087 |
| NA | beta-lactamase | SubName: Full=Beta-lactamase; | pOX7 | CDS | 2642 | 861 | + | 0.491289 | |
| NA | pSK41 | sig_peptide | 755 | 108 | + | 0.25 | |||
| NA | ORF64 | SubName: Full=ORF64; SubName: Full=Uncharacterized protein; | pSK3 | CDS | 1367 | 195 | + | 0.266667 | |
| NA | replication protein | SubName: Full=Replication protein; | pT181 | CDS | 826 | 945 | + | 0.321693 | |
| NA | unknown | SubName: Full=TrsO; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 37179 | 168 | + | 0.255952 | |
| NA | pC221 | repeat_unit | 2994 | 7 | + | 0.571429 | |||
| NA | VRA0035 | Tn1546 transposase | SubName: Full=Tn1546 transposase; | pLW043 | CDS | 27395 | 2967 | - | 0.372093 |
| NA | pSK41 | misc_feature | 10221 | 2 | - | 1 | |||
| NA | pC221 | RBS | 1187 | 4 | + | 0.5 | |||
| NA | pSK3 | rep_origin | 153 | 158 | + | 0.367089 | |||
| NA | RecName: Full=Protein rep; AltName: Full=Reading frame A; AltName: Full=Replication protein; | pC194 | CDS | 114 | 699 | - | 0.261803 | ||
| NA | pC223 | variation | 2178 | 2 | + | 0.5 | |||
| NA | RecName: Full=rRNA adenine N-6-methyltransferase; EC=2.1.1.184; AltName: Full=Erythromycin resistance protein; AltName: Full=Macrolide-lincosamide-streptogramin B resistance protein; | pE194 | CDS | 2004 | 735 | - | 0.255782 | ||
| NA | unknown | SubName: Full=ParM protein; SubName: Full=Uncharacterized protein; | pSK41 | CDS | 11188 | 1041 | + | 0.292988 | |
| NA | VRA0055 | hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 49317 | 1617 | + | 0.248609 |
| NA | pOX7 | repeat_unit | 7211 | 8 | + | 0.125 | |||
| NA | pS194 | terminator | 835 | 27 | + | 0.407407 | |||
| NA | SubName: Full=Staphylococcus aureus plasmid pC221 complete DNA sequence; SubName: Full=Staphylococcus plasmid pC221; Flags: Fragment; | pC221 | CDS | 1 | 424 | + | 0.320755 | ||
| NA | pC221 | misc_feature | 1022 | 92 | + | 0.293478 | |||
| NA | pSN2 | misc_feature | 165 | 7 | - | ||||
| NA | pE194 | variation | 1013 | 1 | + | 1 | |||
| NA | RecName: Full=Replication initiation protein; | pC221 | CDS | 1202 | 936 | + | 0.311966 | ||
| NA | VRA0060 | conserved hypothetical protein | SubName: Full=ParM protein; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 55973 | 1041 | + | 0.292988 |
| NA | pC221 | repeat_unit | 2248 | 12 | + | 0.333333 | |||
| NA | membrane protein | SubName: Full=Membrane protein; | pSK41 | CDS | 16539 | 747 | - | 0.27577 | |
| NA | VRA0023 | replication protein | SubName: Full=Putative replication initiation protein Rep(RC); SubName: Full=Putative replication initiator protein Rep(RC); SubName: Full=Replication protein; | pLW043 | CDS | 19095 | 924 | + | 0.288961 |
| NA | pC221 | repeat_unit | 1276 | 9 | + | 0.555556 | |||
| NA | pC221 | misc_signal | 2981 | 20 | + | 0.45 | |||
| NA | pC221 | repeat_unit | 1299 | 7 | + | 0.428571 | |||
| NA | RecName: Full=Replication protein; | pE194 | CDS | 1244 | 351 | + | 0.333333 | ||
| NA | MobC | SubName: Full=MobC; SubName: Full=Mobilization protein; SubName: Full=Relaxase accessory protein; | pC223 | CDS | 1962 | 399 | + | 0.378446 | |
| NA | pNVH01 | rep_origin | 1257 | 20 | + | 0.3 | |||
| NA | RecName: Full=Replication initiation protein; | pC221 | CDS | 1202 | 936 | + | 0.311966 | ||
| NA | pOX7 | repeat_unit | 791 | 8 | + | 0.25 | |||
| NA | VRA0029 | acetyltransferase, GNAT family | SubName: Full=Acetyltransferase; SubName: Full=Acetyltransferase GNAT family protein; SubName: Full=Acetyltransferase, GNAT family; SubName: Full=GCN5-related N-acetyltransferase; SubName: Full=GNAT family acetyltransferase; SubName: Full=Putative acetyltransferase; SubName: Full=Putative aminoglycoside acetyltransferase; | pLW043 | CDS | 22993 | 447 | + | 0.259508 |
| NA | VRA0027 | IS431mec transposase | SubName: Full=IS257 transposase TnpE; SubName: Full=IS431mec transposase; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpD; SubName: Full=Putative transposase TnpE; SubName: Full=TnpE; SubName: Full=Transposase; | pLW043 | CDS | 21881 | 675 | + | 0.340741 |
| NA | pC223 | variation | 2008 | 1 | + | 1 | |||
| NA | RecName: Full=Uncharacterized 8.7 kDa protein; AltName: Full=Reading frame D; | pC194 | CDS | 2421 | 243 | - | 0.246914 | ||
| NA | RecName: Full=Chloramphenicol acetyltransferase; Short=CAT; EC=2.3.1.28; | pC221 | CDS | 2267 | 648 | + | 0.251543 | ||
| NA | pC221 | repeat_unit | 3052 | 9 | + | 0.555556 | |||
| NA | pC221 | repeat_unit | 2981 | 7 | + | 0.571429 | |||
| NA | VRA0033 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 26282 | 96 | + | 0.375 |
| NA | VRA0024 | hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 20347 | 63 | + | 0.333333 |
| NA | VRA0058 | hypothetical protein | SubName: Full=Uncharacterized protein; | pLW043 | CDS | 55041 | 333 | + | 0.21021 |
| NA | unknown | SubName: Full=Uncharacterized protein; | pUB101 | CDS | 12024 | 345 | + | 0.336232 | |
| NA | pUB101 | misc_feature | 18840 | 113 | + | 0.247788 | |||
| NA | pSK6 | repeat_region | 63 | 165 | + | 0.345455 | |||
| NA | pS194 | terminator | 2826 | 158 | + | 0.379747 | |||
| NA | pOX7 | repeat_unit | 791 | 8 | + | 0.125 | |||
| NA | pC223 | variation | 2100 | 1 | + | ||||
| NA | VRA0006 | IS431mec transposase | SubName: Full=IS431mec transposase; SubName: Full=Putative transposase Tnp(693A); SubName: Full=Putative transposase TnpC; SubName: Full=Putative transposase TnpE; SubName: Full=Transposase; SubName: Full=Transposase TnpC; | pLW043 | CDS | 3914 | 675 | + | 0.345185 |
| NA | pSK6 | rep_origin | 63 | 165 | + | 0.345455 | |||
| NA | VRA0003 | conserved hypothetical protein | SubName: Full=Genes for thymidylate synthetase and diydrofolate reductase type S1 in plamid pABU 1; SubName: Full=Putative DegV-family protein; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 1885 | 423 | - | 0.328605 |
| NA | MobB | SubName: Full=MobB; | pC223 | CDS | 3051 | 711 | + | 0.353024 | |
| NA | pC221 | repeat_unit | 2223 | 12 | + | 0.333333 | |||
| NA | VRA0059 | membrane protein, putative | SubName: Full=Membrane protein, putative; SubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 55477 | 234 | + | 0.252137 |
| AACA-APHD | VRA0030 | 6'-aminoglycoside N-acetyltransferase/2''-aminoglycoside phosphotransferase | RecName: Full=Bifunctional AAC/APH; Includes: RecName: Full=6-aminoglycoside N-acetyltransferase; EC=2.3.1.-; AltName: Full=AAC(6); Includes: RecName: Full=2-aminoglycoside phosphotransferase; EC=2.7.1.-; AltName: Full=APH(2); | pLW043 | CDS | 23440 | 1440 | + | 0.246528 |
| IS256 | pSK41 | repeat_region | 41681 | 425 | + | 0.348235 | |||
| IS256 | pSK41 | repeat_region | 44024 | 425 | + | 0.348235 | |||
| IS257 | pSK41 | repeat_region | 14227 | 790 | + | 0.341772 | |||
| IS257 | pOX7 | repeat_region | 7219 | 782 | + | 0.338875 | |||
| IS257 | pSK41 | repeat_region | 17578 | 791 | + | 0.34134 | |||
| IS257 | pOX7 | repeat_region | 1 | 789 | + | 0.340938 | |||
| IS257 | pSK41 | repeat_region | 40890 | 731 | + | 0.336525 | |||
| IS257 | pT181 | repeat_region | 1 | 789 | + | 0.340938 | |||
| IS257 | pSK41 | repeat_region | 45657 | 789 | + | 0.346008 | |||
| IS257 | pOX7 | repeat_region | 7220 | 788 | + | 0.340102 | |||
| IS257 | pSK41 | repeat_region | 37328 | 791 | + | 0.340076 | |||
| IS257 | pSK41 | repeat_region | 22925 | 789 | + | 0.340938 | |||
| IS257 | pOX7 | repeat_region | 1 | 789 | + | 0.340938 | |||
| IS257 | pSK41 | repeat_region | 44449 | 791 | + | 0.345133 | |||
| IS257 | pT181 | repeat_region | 5236 | 789 | + | 0.340938 | |||
| MWP005 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 3559 | 93 | + | 0.376344 | |
| MWP006 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 3863 | 975 | + | 0.255385 | |
| MWP007 | probable ATP-binding protein | SubName: Full=Probable ATP-binding protein; | pMW2 | CDS | 4957 | 816 | - | 0.297794 | |
| MWP014 | POTENTIAL DNA_INVERTASE | SubName: Full=POTENTIAL DNA_INVERTASE; | pMW2 | CDS | 11470 | 549 | + | 0.331512 | |
| MWP015 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 12432 | 294 | + | 0.363946 | |
| MWP016 | SubName: Full=MWP016 protein; | pMW2 | CDS | 12800 | 1935 | + | 0.252713 | ||
| MWP017 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 14738 | 312 | + | 0.269231 | |
| MWP018 | SubName: Full=MWP018 protein; | pMW2 | CDS | 15061 | 627 | + | 0.291866 | ||
| MWP021 | truncated Pre protein | SubName: Full=Truncated Pre protein; | pMW2 | CDS | 16594 | 600 | + | 0.266667 | |
| MWP022 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 17235 | 303 | - | 0.323432 | |
| MWP025 | hypotehtical protein | SubName: Full=Hypotehtical protein; | pMW2 | CDS | 19324 | 186 | + | 0.322581 | |
| MWP026 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 19270 | 111 | - | 0.252252 | |
| MWP027 | hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 19728 | 744 | - | 0.294355 | |
| aacA-aphD | bifunctional aminoglycoside modifying enzyme AacA-AphD | RecName: Full=Bifunctional AAC/APH; Includes: RecName: Full=6-aminoglycoside N-acetyltransferase; EC=2.3.1.-; AltName: Full=AAC(6); Includes: RecName: Full=2-aminoglycoside phosphotransferase; EC=2.7.1.-; AltName: Full=APH(2); | pSK41 | CDS | 42505 | 1440 | + | 0.246528 | |
| aadD | aminoglycoside adenyltransferase AadD | SubName: Full=AadD; SubName: Full=Aminoglycoside O-adenyl transferase; SubName: Full=Aminoglycoside adenyltransferase AadD; SubName: Full=Kanamycin nucleotidyltransferase; EC=2.7.7.-; SubName: Full=Kanamycin resistance protein; SubName: Full=O-nucleotidyltransferase(4); | pSK41 | CDS | 21861 | 771 | - | 0.422827 | |
| artA | putative regulator of transfer genes ArtA | SubName: Full=Putative regulator of transfer genes ArtA; SubName: Full=Regulator of transfer gene ArtA; SubName: Full=Transcriptional regulator TrsN; SubName: Full=TrsN protein; | pSK41 | CDS | 23764 | 189 | - | 0.259259 | |
| artA | VRA0007 | regulator of transfer gene ArtA | SubName: Full=Putative regulator of transfer genes ArtA; SubName: Full=Regulator of transfer gene ArtA; SubName: Full=Transcriptional regulator TrsN; SubName: Full=TrsN protein; | pLW043 | CDS | 4697 | 189 | - | 0.259259 |
| binL | DNA-invertase | SubName: Full=DNA-invertase; | pMW2 | CDS | 7180 | 594 | - | 0.3367 | |
| blaI | beta-lactamase repressor | SubName: Full=Beta-lactamase repressor; | pMW2 | CDS | 8037 | 381 | - | 0.244094 | |
| blaI | VRA0049 | beta-lactamase repressor BlaI | SubName: Full=Beta-lactamase repressor; SubName: Full=Beta-lactamase repressor BlaI; SubName: Full=BlaI; | pLW043 | CDS | 43835 | 381 | + | 0.259843 |
| blaI | BlaI | SubName: Full=Beta lactamase repressor; SubName: Full=Beta-lactamase repressor; SubName: Full=Beta-lactamase repressor BlaI; SubName: Full=BlaI; SubName: Full=Penicillinase repressor; | pUB101 | CDS | 13859 | 381 | - | 0.257218 | |
| blaR1 | BlaR1 | SubName: Full=BlaR1; | pUB101 | CDS | 14229 | 1707 | - | 0.264792 | |
| blaR1 | VRA0048 | beta-lactamase regulatory protein BlaR1 | SubName: Full=Beta-lactamase regulatory protein BlaR1; SubName: Full=Bla regulator protein blaR1; | pLW043 | CDS | 42088 | 1758 | + | 0.260523 |
| blaR1 | bla regulator protein blaR1 | SubName: Full=Bla regulator protein blaR1; | pMW2 | CDS | 8407 | 1758 | - | 0.261092 | |
| blaZ | VRA0047 | beta-lactamase | SubName: Full=Beta-lactamase; EC=3.5.2.6; SubName: Full=BlaZ; EC=3.5.2.6; | pLW043 | CDS | 41136 | 846 | - | 0.276596 |
| blaZ | beta-lactamase | SubName: Full=Beta-lactamase; | pMW2 | CDS | 10271 | 846 | + | 0.27896 | |
| blaZ | BlaZ | SubName: Full=Beta-lactamase; SubName: Full=BlaZ; | pUB101 | CDS | 16071 | 846 | + | 0.276596 | |
| ble | bleomycin resistance protein Ble | RecName: Full=Bleomycin resistance protein; Short=BRP; AltName: Full=Bleomycin-binding protein; | pSK41 | CDS | 21240 | 399 | - | 0.403509 | |
| cadD | CadD | SubName: Full=CadD; | pUB101 | CDS | 1415 | 630 | - | 0.269841 | |
| cadD | putative cadmium binding protein | SubName: Full=Putative cadmium binding protein; | pMW2 | CDS | 2407 | 618 | + | 0.270227 | |
| cadDX operon | pUB101 | promoter | 2042 | 209 | - | 0.339713 | |||
| cadX | CadX | SubName: Full=CadX; | pMW2 | CDS | 3043 | 348 | + | 0.258621 | |
| cadX | CadX | SubName: Full=CadX; | pUB101 | CDS | 1049 | 348 | - | 0.258621 | |
| cat | CAT protein | RecName: Full=Chloramphenicol acetyltransferase; EC=2.3.1.28; | pKH7 | CDS | 1149 | 648 | + | 0.25 | |
| dfrA | VRA0004 | trimethoprim resistant dihydrofolate reductase | RecName: Full=Dihydrofolate reductase; EC=1.5.1.3; | pLW043 | CDS | 2317 | 486 | - | 0.355967 |
| far1 | Far1 | SubName: Full=Far1; SubName: Full=FusB; SubName: Full=FusB protein; SubName: Full=Fusidic acid resistance; | pUB101 | CDS | 19072 | 642 | - | 0.252336 | |
| nes | VRA0057 | nicking enzyme | SubName: Full=Nicking enzyme; SubName: Full=OriT nickase; SubName: Full=OriT nickase Nes; SubName: Full=OriT relaxase Nes; | pLW043 | CDS | 52900 | 1998 | - | 0.264765 |
| nes | oriT nickase Nes | SubName: Full=Nicking enzyme; SubName: Full=OriT nickase; SubName: Full=OriT nickase Nes; SubName: Full=OriT relaxase Nes; | pSK41 | CDS | 8115 | 1998 | - | 0.264765 | |
| pre | Pre | SubName: Full=Plasmid recombinase Pre; SubName: Full=Plasmid recombination enzyme; SubName: Full=Pre; SubName: Full=Recombination/mobilization protein; | pSK41 | CDS | 19471 | 1263 | - | 0.338084 | |
| pre | recombination protein | SubName: Full=Recombination protein; | pKH6 | CDS | 1886 | 1242 | + | 0.302738 | |
| pre | recombination protein | SubName: Full=Recombination protein; | pKH7 | CDS | 2074 | 1212 | + | 0.30033 | |
| qacC | VRA0026 | quaternary ammonium compound-resistance protein QacC | SubName: Full=Antiseptic resistance protein; SubName: Full=Multi-drug efflux pump; SubName: Full=Multidrug efflux protein; SubName: Full=Multidrug resistance efflux protein QacC; SubName: Full=Multidrug resistance efflux protein Smr; SubName: Full=Quaternary ammonium compound-resistance protein QacC; SubName: Full=Smr protein; | pLW043 | CDS | 20990 | 324 | - | 0.290123 |
| qacJ | SubName: Full=QacJ protein; | pNVH01 | CDS | 1428 | 324 | + | 0.290123 | ||
| rep | replication protein | SubName: Full=Replication protein; | pSK3 | CDS | 876 | 465 | + | 0.311828 | |
| rep | putative replication initiation protein Rep | SubName: Full=Putative replication initiation protein Rep; SubName: Full=Putative replication initiator protein Rep; SubName: Full=Replication initiator protein; | pSK41 | CDS | 13205 | 960 | + | 0.258333 | |
| rep | replication protein | SubName: Full=Replication protein; | pSK6 | CDS | 770 | 465 | + | 0.311828 | |
| rep | replication protein Rep | SubName: Full=Replication protein Rep; | pMW2 | CDS | 17577 | 861 | + | 0.26597 | |
| rep | replication protein | SubName: Full=Replication protein; | pKH7 | CDS | 87 | 933 | + | 0.306538 | |
| rep(RC) | putative replication initiation protein Rep(RC) | SubName: Full=Putative replication initiation protein Rep(RC); SubName: Full=Putative replication initiator protein Rep(RC); SubName: Full=Replication protein; | pSK41 | CDS | 38162 | 924 | + | 0.288961 | |
| rep(RC) | pSK41 | pseudo | 15017 | 2562 | + | 0.297814 | |||
| rep1 | Rep1 | SubName: Full=Rep1; | pUB101 | CDS | 395 | 201 | - | 0.358209 | |
| rep2 | Rep2 | pUB101 | CDS | 3019 | 177 | - | 0.299435 | ||
| repA | RepA | SubName: Full=RepA; | pUB101 | CDS | 3335 | 1185 | - | 0.264135 | |
| repA | VRA0001 | replication initiator protein | SubName: Full=Putative replication initiation protein Rep; SubName: Full=Putative replication initiator protein Rep; SubName: Full=Replication initiator protein; | pLW043 | CDS | 101 | 960 | + | 0.258333 |
| repB | RepB | SubName: Full=RepB; | pUB101 | CDS | 4779 | 510 | + | 0.264706 | |
| repC | replication protein | SubName: Full=RepC; SubName: Full=RepC protein; SubName: Full=Replication initiation protein; SubName: Full=Replication protein; | pKH6 | CDS | 1 | 4439 | + | 0.300969 | |
| repNVH01 | replication protein | SubName: Full=Replication protein; | pNVH01 | CDS | 100 | 1005 | - | 0.287562 | |
| repU | pSK41 | pseudo | 18369 | 4556 | - | 0.356453 | |||
| res | putative resolvase Res | SubName: Full=Putative resolvase Res; SubName: Full=Resolvase; SubName: Full=Resolvase/integrase; | pSK41 | CDS | 2779 | 558 | + | 0.31362 | |
| res1 | Res1 | SubName: Full=Res1; | pUB101 | CDS | 5924 | 561 | - | 0.2959 | |
| res2 | Res2 | SubName: Full=Res2; | pUB101 | CDS | 8961 | 630 | + | 0.315873 | |
| res3 | Res3 | SubName: Full=Res3; SubName: Full=Resolvase; | pUB101 | CDS | 9916 | 543 | - | 0.26151 | |
| res4 | Res4 | SubName: Full=Res4; | pUB101 | CDS | 12969 | 594 | + | 0.363636 | |
| slp | Slp | SubName: Full=Slp; | pUB101 | CDS | 10571 | 492 | + | 0.341463 | |
| smr | multidrug resistance efflux protein Smr | SubName: Full=Antiseptic resistance protein; SubName: Full=Multi-drug efflux pump; SubName: Full=Multidrug efflux protein; SubName: Full=Multidrug resistance efflux protein QacC; SubName: Full=Multidrug resistance efflux protein Smr; SubName: Full=Quaternary ammonium compound-resistance protein QacC; SubName: Full=Smr protein; | pSK41 | CDS | 40055 | 324 | - | 0.290123 | |
| tet | tetracycline resistance protein | RecName: Full=Tetracycline resistance protein; AltName: Full=Tetracycline efflux protein; | pKH6 | CDS | 321 | 1380 | + | 0.283333 | |
| thyA | VRA0005 | thymidylate synthase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | pLW043 | CDS | 2844 | 957 | - | 0.320794 |
| tnp1 | Tnp1 | SubName: Full=Tnp1; SubName: Full=Tnp2; SubName: Full=Transposase; SubName: Full=Transposase for IS431mec; | pUB101 | CDS | 21105 | 675 | + | 0.340741 | |
| tnp2 | Tnp2 | SubName: Full=Tnp1; SubName: Full=Tnp2; SubName: Full=Transposase; SubName: Full=Transposase for IS431mec; | pUB101 | CDS | 16983 | 675 | + | 0.340741 | |
| tnpA | putative transposase TnpA | SubName: Full=IS431mec transposase; SubName: Full=IS431mec-like transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Putative transposase TnpB; SubName: Full=Putative transposase TnpD; SubName: Full=Transposase; SubName: Full=Transposase TnpB; | pSK41 | CDS | 14283 | 675 | + | 0.346667 | |
| tnpB | putative transposase TnpB | SubName: Full=IS431mec transposase; SubName: Full=IS431mec-like transposase; SubName: Full=Putative transposase TnpA; SubName: Full=Putative transposase TnpB; SubName: Full=Putative transposase TnpD; SubName: Full=Transposase; SubName: Full=Transposase TnpB; | pSK41 | CDS | 17635 | 675 | + | 0.346667 | |
| tnpC | putative transposase TnpC | SubName: Full=IS431mec transposase; SubName: Full=Putative transposase Tnp(693A); SubName: Full=Putative transposase TnpC; SubName: Full=Putative transposase TnpE; SubName: Full=Transposase; SubName: Full=Transposase TnpC; | pSK41 | CDS | 22981 | 675 | + | 0.345185 | |
| tnpD | putative transposase TnpD | SubName: Full=Putative transposase TnpD; | pSK41 | CDS | 37384 | 675 | + | 0.343704 | |
| tnpE | putative transposase TnpE | SubName: Full=IS257 transposase TnpE; SubName: Full=IS431mec transposase; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpD; SubName: Full=Putative transposase TnpE; SubName: Full=TnpE; SubName: Full=Transposase; | pSK41 | CDS | 40946 | 675 | + | 0.340741 | |
| tnpF | putative transposase TnpF | SubName: Full=IS257 transposase TnpF; SubName: Full=Probable transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase TnpF; | pSK41 | CDS | 44517 | 666 | - | 0.348348 | |
| tnpG | putative transposase TnpG | SubName: Full=Putative transposase; SubName: Full=Putative transposase Tnp(693B); SubName: Full=Putative transposase TnpG; SubName: Full=Transposase for IS-like element; | pSK41 | CDS | 45713 | 675 | + | 0.351111 | |
| topB | VRA0016 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | pLW043 | CDS | 12432 | 2103 | + | 0.271517 |
| traA | VRA0008 | TraA | SubName: Full=TraA; SubName: Full=TrsA protein; | pLW043 | CDS | 5057 | 975 | + | 0.306667 |
| traA | TraA | SubName: Full=TraA; SubName: Full=TrsA protein; | pSK41 | CDS | 24124 | 975 | + | 0.306667 | |
| traB | putative membrane protein TraB | SubName: Full=Putative membrane protein TraB; SubName: Full=Putative membrane protein TrsB; SubName: Full=TraB; SubName: Full=TrsB protein; | pSK41 | CDS | 25115 | 318 | + | 0.358491 | |
| traB | VRA0009 | TraB | SubName: Full=Putative membrane protein TraB; SubName: Full=Putative membrane protein TrsB; SubName: Full=TraB; SubName: Full=TrsB protein; | pLW043 | CDS | 6048 | 318 | + | 0.358491 |
| traC | VRA0010 | TraC | SubName: Full=Putative membrane protein TraC; SubName: Full=Putative membrane protein TrsC; SubName: Full=TraC; SubName: Full=TrsC protein; | pLW043 | CDS | 6425 | 408 | + | 0.281863 |
| traC | putative membrane protein TraC | SubName: Full=Putative membrane protein TraC; SubName: Full=Putative membrane protein TrsC; SubName: Full=TraC; SubName: Full=TrsC protein; | pSK41 | CDS | 25492 | 408 | + | 0.281863 | |
| traD | VRA0011 | TraD | SubName: Full=TraD; SubName: Full=TrsD protein; | pLW043 | CDS | 6819 | 684 | + | 0.273392 |
| traD | TraD | SubName: Full=TraD; SubName: Full=TrsD protein; | pSK41 | CDS | 25886 | 684 | + | 0.273392 | |
| traE | putative ATPase TraE | SubName: Full=Putative ATPase TraE; SubName: Full=Putative ATPase TrsE; SubName: Full=TrsE protein; | pSK41 | CDS | 26584 | 2019 | + | 0.28529 | |
| traE | VRA0012 | TraE | SubName: Full=Putative ATPase TraE; SubName: Full=TraE; | pLW043 | CDS | 7523 | 2013 | + | 0.285643 |
| traF | putative membrane protein TraF | SubName: Full=Putative membrane protein TraF; SubName: Full=Putative membrane protein TrsF; SubName: Full=TraF; SubName: Full=TrsF protein; | pSK41 | CDS | 28614 | 1281 | + | 0.26776 | |
| traF | VRA0013 | TraF | SubName: Full=TraF; | pLW043 | CDS | 9547 | 1281 | + | 0.266979 |
| traG | VRA0014 | TraG | SubName: Full=Putative membrane protein TraG; SubName: Full=Putative membrane protein TrsG; SubName: Full=TraG; | pLW043 | CDS | 10845 | 1077 | + | 0.390901 |
| traG | putative membrane protein TraG | SubName: Full=Putative membrane protein TraG; SubName: Full=Putative membrane protein TrsG; SubName: Full=TraG; | pSK41 | CDS | 29912 | 1077 | + | 0.390901 | |
| traH | VRA0015 | TraH | SubName: Full=Conjugal transfer protein traH; SubName: Full=Lipoprotein TraH; SubName: Full=Lipoprotein TrsH; SubName: Full=TraH; SubName: Full=TrsH protein; | pLW043 | CDS | 11931 | 486 | + | 0.269547 |
| traH | lipoprotein TraH | SubName: Full=Conjugal transfer protein traH; SubName: Full=Lipoprotein TraH; SubName: Full=Lipoprotein TrsH; SubName: Full=TraH; SubName: Full=TrsH protein; | pSK41 | CDS | 30998 | 486 | + | 0.269547 | |
| traI | putative topoisomerase TraI | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | pSK41 | CDS | 31499 | 2103 | + | 0.271517 | |
| traJ | VRA0017 | TraJ | SubName: Full=Putative membrane protein TraJ; SubName: Full=TraJ; SubName: Full=TrsJ protein; | pLW043 | CDS | 14550 | 465 | + | 0.273118 |
| traJ | putative membrane protein TraJ | SubName: Full=Putative membrane protein TraJ; SubName: Full=TraJ; SubName: Full=TrsJ protein; | pSK41 | CDS | 33617 | 465 | + | 0.273118 | |
| traK | VRA0018 | TraK | SubName: Full=Putative membrane protein TraK; SubName: Full=TraK; SubName: Full=TraK-like protein; SubName: Full=TrsK protein; | pLW043 | CDS | 15011 | 1641 | + | 0.29738 |
| traK | putative membrane protein TraK | SubName: Full=Putative membrane protein TraK; SubName: Full=TraK; SubName: Full=TraK-like protein; SubName: Full=TrsK protein; | pSK41 | CDS | 34078 | 1641 | + | 0.29738 | |
| traL | putative membrane protein TraL | SubName: Full=Putative membrane protein TraL; | pSK41 | CDS | 35796 | 918 | + | 0.308279 | |
| traL | VRA0019 | TraL | SubName: Full=Putative membrane protein TraL; SubName: Full=TraL; SubName: Full=TrsL protein; | pLW043 | CDS | 16729 | 918 | + | 0.308279 |
| traM | VRA0020 | TraM | RecName: Full=Single-stranded DNA-binding protein; | pLW043 | CDS | 17663 | 393 | + | 0.287532 |
| traM | putative single-stranded DNA binding protein TraM | RecName: Full=Single-stranded DNA-binding protein; | pSK41 | CDS | 36730 | 393 | + | 0.287532 | |
| trsO | VRA0021 | TrsO | SubName: Full=TrsO; SubName: Full=Uncharacterized protein; | pLW043 | CDS | 18112 | 168 | + | 0.255952 |
| truncated | truncated conserved hypothetical protein | SubName: Full=Uncharacterized protein; | pMW2 | CDS | 18524 | 342 | + | 0.339181 | |
| truncated pre | truncated Pre protein | SubName: Full=Truncated Pre protein; | pMW2 | CDS | 15925 | 306 | + | 0.22549 | |
| truncated pre | truncated Pre protein | SubName: Full=Truncated Pre protein; | pMW2 | CDS | 16255 | 300 | + | 0.316667 | |
| truncated rep | truncated putative replication initiation protein Rep | SubName: Full=Truncated putative replication initiation protein Rep; | pMW2 | CDS | 791 | 114 | + | 0.263158 | |
| truncated rep | truncated putative replication initiation protein Rep | SubName: Full=Truncated putative replication initiation protein Rep; | pMW2 | CDS | 228 | 276 | + | 0.231884 | |
| truncated tnp Tn552 | truncated probable transposase | SubName: Full=Truncated probable transposase; | pMW2 | CDS | 5765 | 834 | - | 0.322542 | |
| truncated tnp Tn552 | truncated probable transposase | SubName: Full=Truncated probable transposase; | pMW2 | CDS | 6540 | 669 | - | 0.316891 | |
| vanA | VRA0040 | vancomycin/teicoplanin A-type resistance protein VanA | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | pLW043 | CDS | 34299 | 1032 | + | 0.446705 |
| vanH | VRA0039 | vancomycin resistance protein VanH | SubName: Full=Vancomycin resistance protein VanH; | pLW043 | CDS | 33338 | 969 | + | 0.44582 |
| vanR | VRA0037 | vancomycin response regulator VanR | SubName: Full=Vancomycin response regulator VanR; | pLW043 | CDS | 31296 | 696 | + | 0.413793 |
| vanS | VRA0038 | sensor histidine kinase VanS | SubName: Full=Sensor histidine kinase VanS; | pLW043 | CDS | 31969 | 1155 | + | 0.412121 |
| vanX | VRA0041 | vancomycin B-type resistance protein VanX | SubName: Full=Vancomycin B-type resistance protein VanX; | pLW043 | CDS | 35336 | 609 | + | 0.43514 |
| vanY | VRA0042 | D-alanyl-D-alanine carboxypeptidase VanY | SubName: Full=D-alanyl-D-alanine carboxypeptidase VanY; | pLW043 | CDS | 36392 | 891 | + | 0.344557 |
| vanZ | VRA0043 | vanZ protein | SubName: Full=VanZ protein; | pLW043 | CDS | 37435 | 486 | + | 0.288066 |
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