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2024-06-01 23:33:38

Gene list

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COG category: Defense mechanisms
Genomic element: chromosome

Number of genes found: 79

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Pseudomonas fluorescens Pf-5, Pf-5
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PFL_1772 ABC transporter, ATP-binding protein chromosome CDS1974672 951 + 0.604627
NA PFL_1503 conserved hypothetical proteinSubName: Full=HNH endonuclease domain protein; chromosome CDS1687825 378 - 0.62963
NA PFL_2982 toxin secretion ABC transporter protein, HlyB familySubName: Full=Type I secretion system ATPase FitC; chromosome CDS3348465 2160 + 0.665741
NA PFL_6076 ABC transporter, permease protein, putativeSubName: Full=Putative Lol-like lipoprotein-translocating system, transmembrane protein TagS; chromosome CDS6897920 1203 - 0.701579
NA PFL_0527 lipid A ABC transporter, ATP-binding/permease proteinRecName: Full=Lipid A export ATP-binding/permease protein MsbA; EC=3.6.3.-; chromosome CDS615302 1806 + 0.609081
NA PFL_1158 RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) familySubName: Full=RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein; chromosome CDS1323942 3057 + 0.64475
NA PFL_2442 MATE efflux family proteinSubName: Full=MATE efflux family protein; chromosome CDS2705670 1356 + 0.666667
NA PFL_5529 ABC transporter, ATP-binding proteinSubName: Full=Efflux ABC transporter, ATP-binding protein; chromosome CDS6309545 711 + 0.666667
NA PFL_3846 conserved hypothetical protein chromosome CDS4447747 849 + 0.532391
NA PFL_1962 lipoprotein releasing system, ATP-binding protein LolDRecName: Full=Lipoprotein-releasing system ATP-binding protein LolD; EC=3.6.3.-; chromosome CDS2194774 699 + 0.659514
NA PFL_2228 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS2489397 669 + 0.686099
NA PFL_2229 ABC transporter, permease protein, putativeSubName: Full=Efflux ABC transporter, permease protein; chromosome CDS2490067 2481 + 0.696896
NA PFL_4602 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS5311207 867 - 0.645905
NA PFL_2946 ABC transporter, ATP-binding proteinSubName: Full=Efflux ABC transporter, permease protein; chromosome CDS3299110 1200 - 0.664167
NA PFL_5415 membrane protein, putativeSubName: Full=Putative membrane protein; chromosome CDS6182986 663 + 0.630468
NA PFL_1331 multidrug/solvent RND transporter TtgBSubName: Full=Efflux transporter, permease protein EmhB; chromosome CDS1505607 3147 - 0.621544
NA PFL_2964 type I restriction-modification system, S subunit, putativeSubName: Full=Putative type I restriction-modification system, S subunit; chromosome CDS3321535 1656 - 0.582126
NA PFL_4134 ABC transporter, ATP-binding protein, MsbA familySubName: Full=2-phenylethylamine uptake protein PeaH; chromosome CDS4799042 1719 - 0.673647
NA PFL_3114 undecaprenol kinase, putativeRecName: Full=Undecaprenyl-diphosphatase; EC=3.6.1.27; AltName: Full=Bacitracin resistance protein; AltName: Full=Undecaprenyl pyrophosphate phosphatase; chromosome CDS3584957 831 - 0.625752
NA PFL_5444 LD-carboxypeptidase family proteinSubName: Full=LD-carboxypeptidase family protein; chromosome CDS6214980 948 - 0.626582
NA PFL_2798 ABC transporter, permease protein, putativeSubName: Full=ABC transporter, permease protein PltN; chromosome CDS3116902 1119 + 0.624665
NA PFL_0238 RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) familySubName: Full=RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein; chromosome CDS274718 3087 + 0.642371
NA PFL_6029 multidrug resistance protein NorM, putativeSubName: Full=Putative multidrug resistance protein NorM; chromosome CDS6848976 1407 + 0.680881
NA PFL_2980 RTX toxin transporter VC1448SubName: Full=Type I secretion system ATPase FitA; chromosome CDS3344936 2142 + 0.651727
NA PFL_5974 ABC transporter, ATP binding/permease proteinSubName: Full=Putative ABC transporter, ATP binding/permease protein; chromosome CDS6790161 2727 + 0.660799
NA PFL_6077 ABC transporter, ATP-binding proteinSubName: Full=Putative Lol-like lipoprotein-translocating system, ATP-binding protein TagT; chromosome CDS6899122 717 - 0.700139
NA PFL_4054 beta-lactamaseSubName: Full=Beta-lactamase; EC=3.5.2.6; chromosome CDS4666561 1173 + 0.656437
NA PFL_4323 ABC transporter, ATP-binding/permease proteinSubName: Full=ABC transporter, permease/ATP-binding protein; chromosome CDS5027849 1821 - 0.635914
NA PFL_2832 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3156047 651 + 0.645161
NA PFL_3171 ABC transporter, ATP-binding protein, putativeSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS3648668 1908 + 0.687631
NA PFL_4113 streptomycin 3-kinase chromosome CDS4774202 789 - 0.684411
NA PFL_6100 lipoprotein, putative chromosome CDS6931399 372 - 0.655914
NA PFL_1028 multidrug efflux RND transporterSubName: Full=RND transporter, HAE1 family; chromosome CDS1179770 3063 - 0.662749
NA PFL_1541 ABC transporter, ATP-binding/permease proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS1729868 1833 - 0.652482
NA PFL_2947 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS3300306 705 - 0.655319
NA PFL_4126 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS4789731 1110 - 0.710811
NA PFL_2558 AcrB/AcrD/AcrF family protein, putativeSubName: Full=RND transporter, heavy metal efflux (HME) family, permease protein; chromosome CDS2833428 3222 - 0.667598
NA PFL_2640 beta-lactamase, putativeSubName: Full=Beta-lactamase; chromosome CDS2920432 1812 - 0.676049
NA PFL_5711 inner membrane protein CreDSubName: Full=Inner membrane protein, CreD family; chromosome CDS6509189 1377 - 0.619463
NA PFL_5530 ABC efflux transporter, permease protein, putativeSubName: Full=Efflux ABC transporter, permease protein; chromosome CDS6310257 1266 + 0.659558
NA PFL_3970 beta-lactamaseSubName: Full=Esterase EstC-like protein; chromosome CDS4584250 1146 - 0.656195
NA PFL_5049 AcrB/AcrD/AcrF family proteinSubName: Full=RND transporter, heavy metal efflux (HME) family, permease protein; chromosome CDS5806930 3096 + 0.656977
NA PFL_3495 ABC transporter, ATP-binding/permease proteinSubName: Full=Putative ABC transporter, permease/ATP-binding protein; chromosome CDS4025430 1755 - 0.706553
NA PFL_4712 membrane protein, putativeSubName: Full=Putative membrane protein; chromosome CDS5444784 1533 + 0.562948
NA PFL_0135 toxin secretion ATP-binding proteinSubName: Full=Type I secretion system ATPase; chromosome CDS156831 2154 + 0.644383
NA PFL_5975 ABC transporter, permease proteinSubName: Full=ABC-2 type transporter; chromosome CDS6792887 1119 + 0.651475
NA PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative chromosome CDS3115755 1143 + 0.618548
NA PFL_0088 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase AmiD; EC=3.5.1.28; chromosome CDS87759 780 + 0.637179
NA PFL_3271 multidrug efflux RND transporterSubName: Full=Acriflavine resistance protein B; chromosome CDS3776576 3099 + 0.659568
NA PFL_0157 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS183075 891 + 0.659933
NA PFL_1935 ABC transporter, ATP-binding/permease protein chromosome CDS2157868 1869 + 0.632959
NA PFL_3170 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS3646894 1782 + 0.695286
NA PFL_2796 ABC transporter, ATP binding/permease proteinSubName: Full=ABC transporter, ATP binding/permease protein PltJ; chromosome CDS3113976 1770 + 0.651977
NA PFL_3628 beta-lactamase, putativeSubName: Full=Putative beta-lactamase; chromosome CDS4188477 1620 - 0.665432
NA PFL_3494 ABC transporter, permease/ATP-binding protein, putativeSubName: Full=Putative ABC transporter, permease/ATP-binding protein; chromosome CDS4023667 1767 - 0.70798
NA PFL_1932 multidrug resistance protein NorM, putative chromosome CDS2154728 1569 - 0.660293
NA PFL_0258 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, MFP family; chromosome CDS301221 1188 - 0.656566
NA PFL_1006 HlyD family secretion proteinSubName: Full=Fusaric acid resistance protein FusE; chromosome CDS1152379 861 + 0.642276
NA PFL_0143 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS167221 1071 + 0.690009
NA PFL_1342 beta-lactamase chromosome CDS1518183 1143 + 0.684164
NA PFL_1022 alginate biosynthesis protein Alg44SubName: Full=Alginate biosynthesis protein Alg44; chromosome CDS1170895 1170 - 0.654701
NA PFL_2775 beta-lactamaseSubName: Full=Beta-lactamase; chromosome CDS3080621 882 - 0.704082
ampD PFL_0853 N-acetyl-anhydromuramyl-L-alanine amidase AmpDSubName: Full=N-acetyl-anhydromuramyl-L-alanine amidase AmpD; chromosome CDS985373 561 + 0.604278
ampE PFL_0854 inner membrane protein AmpESubName: Full=Inner membrane protein AmpE; chromosome CDS985930 837 + 0.65233
dinF PFL_0680 DNA-damage-inducible protein FSubName: Full=MATE efflux family protein; chromosome CDS793198 1347 - 0.697847
drrA PFL_2207 ABC efflux transporter, ATP-binding proteinSubName: Full=2-phenylethanol ABC efflux transporter, ATP-binding protein PedB; chromosome CDS2467571 759 - 0.704875
drrB PFL_2206 ABC efflux transporter, permease proteinSubName: Full=2-phenylethanol ABC efflux transporter, permease protein PedC; chromosome CDS2466783 792 - 0.661616
drrB PFL_1773 ABC transporter, permease proteinSubName: Full=Putative ABC-2 type transporter permease protein; chromosome CDS1975619 780 + 0.602564
emrA PFL_3917 multidrug resistance proteinSubName: Full=Multidrug resistance protein A; chromosome CDS4521606 1203 - 0.616791
estC PFL_1281 carboxylesterase chromosome CDS1451642 1209 + 0.650951
farA PFL_2048 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS2276358 1104 - 0.638587
farA PFL_2541 HlyD family secretion proteinSubName: Full=Auxiliary transport protein, membrane fusion protein family; chromosome CDS2812273 1125 + 0.675556
hsdM PFL_2965 type I restriction-modification system, M subunitSubName: Full=Type I restriction-modification system, M subunit; EC=2.1.1.72; chromosome CDS3323187 1743 - 0.56856
macB PFL_2149 macrolide efflux ABC transporter, ATP-binding/permease proteinRecName: Full=Macrolide export ATP-binding/permease protein MacB 1; EC=3.6.3.-; chromosome CDS2403612 1959 + 0.666156
macB PFL_4082 macrolide efflux ABC transporter, ATP-binding/permease proteinRecName: Full=Macrolide export ATP-binding/permease protein MacB 2; EC=3.6.3.-; chromosome CDS4709850 1974 + 0.665653
mdtB PFL_2860 multidrug RND efflux transporter, permease protein MdtBSubName: Full=Multidrug RND efflux transporter, permease protein MdtB; chromosome CDS3190059 3099 + 0.659245
mdtC PFL_2861 multidrug RND efflux transporter, permease protein MdtCSubName: Full=Multidrug RND efflux transporter, permease protein MdtC; chromosome CDS3193195 3108 + 0.646396
mexF PFL_3241 multidrug efflux RND transporter MexFSubName: Full=Multidrug efflux RND transporter, permease protein MexF; chromosome CDS3738424 3180 + 0.635535
mtrD PFL_3617 multidrug efflux RND transporterSubName: Full=RND transporter, HAE1 family; chromosome CDS4174468 3078 + 0.655945