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2026-03-14 02:17:17

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 122

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t4099 conserved hypothetical proteinchromosome CDS4237346 1125 + 0.536
NA t1442 putative membrane proteinchromosome CDS1486447 666 + 0.531532
NA t2491 puative autotransporter/virulence factorchromosome CDS2561488 2886 - 0.452529
NA t1629 putative proteasechromosome CDS1688560 1047 - 0.542502
NA t2543 probable secreted proteinchromosome CDS2620356 408 + 0.465686
NA t2644 putative type I secretion proteinchromosome CDS2729658 1410 + 0.569504
NA t4260 hypothetical proteinchromosome CDS4426771 2091 + 0.470588
NA t1659 putative membrane proteinchromosome CDS1717488 648 - 0.50463
NA t1896 putative bacteriophage proteinchromosome CDS1952716 261 - 0.421456
NA t4164 putative type-I secretion proteinchromosome CDS4309650 1308 + 0.365443
NA t4162 putative exported proteinchromosome CDS4307643 633 + 0.341232
NA t4163 putative integral membrane proteinchromosome CDS4308272 1389 + 0.365011
NA t1187 putative exported proteinchromosome CDS1256434 486 + 0.493827
NA t2682 putative membrane proteinchromosome CDS2774334 432 + 0.578704
NA t2360 putative membrane proteinchromosome CDS2426452 453 + 0.602649
bcfA t0022 fimbrial subunitchromosome CDS24473 543 + 0.521179
bcfB t0023 fimbrial chaperonechromosome CDS25116 687 + 0.512373
bcfD t0025 fimbrial subunitchromosome CDS28429 1008 + 0.503968
bcfE t0026 fimbrial subunitchromosome CDS29437 546 + 0.47619
bcfF t0027 fimbrial subunitchromosome CDS29998 519 + 0.558767
bcfG t0028 fimbrial chaperonechromosome CDS30509 705 + 0.541844
ccmD t3702 heme exporter protein D2chromosome CDS3817684 213 + 0.694836
ccmD t0613 heme exporter protein D1chromosome CDS696159 213 + 0.694836
clpP t2412 ATP-dependent clp protease proteolytic subunitchromosome CDS2485120 624 - 0.511218
cpxP t3559 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3659998 501 - 0.506986
exbB t3079 biopolymer transport ExbB proteinchromosome CDS3161186 735 - 0.555102
exbD t3078 biopolymer transport ExbD proteinchromosome CDS3160754 426 - 0.502347
ffh t2632 signal recognition particle proteinchromosome CDS2708336 1362 - 0.549192
fimA t2320 Type-1 fimbrial protein, a chain precursorchromosome CDS2384470 555 - 0.54955
fimC t2318 fimbrial chaperone proteinchromosome CDS2383126 693 - 0.494949
fimD t2317 outer membrane usher protein FimD precursorchromosome CDS2380483 2613 - 0.558362
fimF t2315 fimbria-like protein FimF precursorchromosome CDS2378933 519 - 0.543353
fimI t2319 hypothetical proteinchromosome CDS2383862 534 - 0.544944
flgM t1748 negative regulator of flagellin synthesischromosome CDS1813569 294 + 0.510204
flgN t1749 flagella synthesis protein FlgNchromosome CDS1813867 423 + 0.541371
flhA t0964 flagellar biosynthesis protein FlhAchromosome CDS1051231 2079 + 0.560847
flhB t0963 flagellar biosynthetic protein FlhBchromosome CDS1050087 1152 + 0.559028
fliE t0909 flagellar hook-basal body complex protein FliEchromosome CDS1006560 315 + 0.546032
fliF t0908 flagellar basal-body M-ring proteinchromosome CDS1004661 1683 - 0.568627
fliH t0906 flagellar assembly protein FliHchromosome CDS1002973 708 - 0.607345
fliI t0905 flagellum-specific ATP synthasechromosome CDS1001603 1371 - 0.598833
fliJ t0904 flagellar FliJ proteinchromosome CDS1001138 444 - 0.513514
fliN t0900 flagellar motor switch protein FliNchromosome CDS997921 414 - 0.545894
fliP t0898 flagellar biosynthetic protein FliPchromosome CDS996807 738 - 0.536585
fliQ t0897 flagellar biosynthetic protein FliQchromosome CDS996528 270 - 0.514815
fliR t0896 flagellar biosynthetic protein FliRchromosome CDS995725 795 - 0.509434
fliS t0916 flagellar protein FliSchromosome CDS1011706 408 - 0.497549
ftsY t3951 cell division proteinchromosome CDS4090423 1476 + 0.550813
hofB t0149 transport protein HofBchromosome CDS169457 1386 - 0.553391
hofC t0148 transport protein HofCchromosome CDS168265 1203 - 0.541978
hofQ t4018 type II secretion system proteinchromosome CDS4170791 1239 + 0.567393
hopD t4063 Type III leader peptidasechromosome CDS4216773 468 - 0.523504
invA t2798 possible virulence-associated secretory proteinchromosome CDS2876257 2058 - 0.455782
invG t2800 virulence-associated secretory proteinchromosome CDS2879454 1689 - 0.463588
lepB t0275 signal peptidase Ichromosome CDS314007 975 + 0.533333
lspA t0049 lipoprotein signal peptidasechromosome CDS56686 501 + 0.516966
orgA t2771 oxygen-regulated invasion proteinchromosome CDS2851668 672 - 0.449405
pilQ t4245 nucleotide-binding proteinchromosome CDS4413760 1716 + 0.545455
pilR t4246 putative membrane proteinchromosome CDS4415472 1086 + 0.563536
pilT t3011 Type II secretion, ATP-binding, proteinchromosome CDS3101125 981 - 0.574924
pilU t4249 prepilin peptidasechromosome CDS4417675 663 + 0.536953
pilV t4250 prepilinchromosome CDS4418334 1308 + 0.502294
ppdD t0150 prepilin peptidase dependent protein D precursorchromosome CDS170852 438 - 0.534247
prgK t2773 pathogenicity 1 island effector proteinchromosome CDS2852867 759 - 0.459816
prlA t4085 preprotein translocase subunitchromosome CDS4226792 1332 + 0.495495
safB t2559 periplasmic fimbrial chaperone proteinchromosome CDS2637504 741 - 0.479082
safC t2558 outer-membrane fimbrial usher proteinchromosome CDS2634970 2511 - 0.543608
sapB t3828 putative autotransporterchromosome CDS3949023 3351 - 0.523724
secA t0140 preprotein translocase SecA subunitchromosome CDS160098 2706 + 0.538064
secB t3818 export protein SecBchromosome CDS3938132 468 + 0.50641
secD t2456 export membrane protein SecDchromosome CDS2524717 1848 - 0.547078
secE t3480 preprotein translocase SecE subunitchromosome CDS3574468 384 - 0.554688
secF t2455 export membrane protein SecFchromosome CDS2523735 972 - 0.545267
secG t3210 export membrane proteinchromosome CDS3301870 333 - 0.510511
sefB t4534 fimbrial chaperone proteinchromosome CDS4680464 753 + 0.288181
sefC t4536 outer membrane fimbrial usher proteinchromosome CDS4681221 2553 + 0.359185
sipC t2786 pathogenicity island 1 effector proteinchromosome CDS2865714 1230 - 0.474797
spaI t2796 virulence-associated secretory apparatus ATP synthasechromosome CDS2874534 1296 - 0.54321
spaO t2793 antigen presentation protein SpaOchromosome CDS2872192 912 - 0.526316
spaP t2792 virulence-associated secretory proteinchromosome CDS2871528 675 - 0.414815
spaQ t2791 virulence-associated secretory proteinchromosome CDS2871242 261 - 0.467433
spaR t2790 virulence-associated secretory proteinchromosome CDS2870447 792 - 0.497475
spaS t2789 virulence-associated secretory proteinchromosome CDS2869390 1071 - 0.431373
spiA t1262 putative outer membrane secretory proteinchromosome CDS1334869 1494 + 0.423025
sppA t1174 protease IVchromosome CDS1240788 1857 - 0.558428
ssaJ t1277 putative pathogenicity island lipoproteinchromosome CDS1344683 750 + 0.425333
ssaN t1283 putative type III secretion ATP synthasechromosome CDS1350097 1302 + 0.511521
ssaQ t1286 putative type III secretion proteinchromosome CDS1352114 969 + 0.45614
ssaS t1288 putative type III secretion proteinchromosome CDS1353794 267 + 0.41573
ssaT t1289 putative type III secretion proteinchromosome CDS1354061 780 + 0.39359
ssaU t1290 putative type III secretion proteinchromosome CDS1354837 1059 + 0.396601
ssaV t1282 putative type III secretion proteinchromosome CDS1348062 2046 + 0.460411
staB t0189 chaperone protein EcpD precursorchromosome CDS215905 735 - 0.468027
staC t0188 outer membrane usher protein HtrE precursorchromosome CDS213239 2592 - 0.513117
stbA t2521 probable fimbrial proteinchromosome CDS2596311 537 + 0.478585
stbB t2522 fimbrial chaperone proteinchromosome CDS2596909 762 + 0.448819
stbE t2525 fimbrial chaperone proteinchromosome CDS2601511 759 + 0.469038
stcB t0705 putative fimbrial chaperone proteinchromosome CDS791314 684 + 0.397661
stdA t2940 probable fimbrial proteinchromosome CDS3033973 582 - 0.524055
stdB t2939 probable outer membrane fimbrial usher proteinchromosome CDS3031364 2490 - 0.610442
stdC t2938 probable fimbrial chaperone proteinchromosome CDS3030580 744 - 0.583333
steB t2857 outer membrane usher proteinchromosome CDS2935533 2700 + 0.553333
steC t2858 periplasmic fimbrial chaperonechromosome CDS2938245 774 + 0.546512
steF t2861 fimbrial subunitchromosome CDS2940026 537 + 0.482309
stgA t3659 probable fimbrial subunit proteinchromosome CDS3766087 576 + 0.508681
stgB t3660 fimbrial chaperone proteinchromosome CDS3766760 699 + 0.410587
sthA t4634 putative fimbrial proteinchromosome CDS4787384 546 - 0.505495
sthB t4633 putative fimbrial chaperone proteinchromosome CDS4786630 684 - 0.459064
sthD t4631 putative fimbrial subunitchromosome CDS4783473 558 - 0.496416
tatA t3324 sec-independent protein translocase proteinchromosome CDS3424403 255 - 0.454902
tatB t3323 sec-independent protein translocase proteinchromosome CDS3423851 549 - 0.544627
tatC t3322 sec-independent protein translocase proteinchromosome CDS3423069 780 - 0.508974
tatE t2235 sec-independent protein translocase protein TatEchromosome CDS2301533 204 - 0.485294
tolB t2128 tolB protein precursorchromosome CDS2189139 1293 - 0.559938
tolC t3107 outer membrane protein TolC precursorchromosome CDS3191564 1476 + 0.522358
tolQ t2131 tolQ proteinchromosome CDS2192182 693 - 0.519481
tolR t2130 tolR proteinchromosome CDS2191750 429 - 0.51049
yajC t2457 putative membrane proteinchromosome CDS2526592 333 - 0.51952
yidC t3678 putative membrane proteinchromosome CDS3787571 1647 - 0.540984
yohG t0683 putative lipoproteinchromosome CDS768089 1437 + 0.580376
yrfC t4016 putative membrane proteinchromosome CDS4169489 540 + 0.585185
yscR t1287 putative type III secretion proteinchromosome CDS1353150 648 + 0.424383