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2024-06-02 01:33:30

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 100

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Geobacter sulfurreducens PCA, PCA
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA GSU3190 twin-arginine translocation protein, TatA/E family chromosome CDS3496433 237 + 0.506329
NA GSU1784 type IV pilus biogenesis protein PilC, putativeSubName: Full=Type II secretion system inner membrane protein PulF; chromosome CDS1947687 1209 - 0.544251
NA GSU1777 hypothetical protein chromosome CDS1940273 534 - 0.520599
NA GSU0330 general secretion pathway protein C, putativeSubName: Full=Type II secretion system protein GspC, putative serine protease; chromosome CDS360462 876 - 0.606164
NA GSU3466 membrane protein, putativeRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS3811508 1596 - 0.564536
NA GSU1493 type IV pilus biogenesis protein PilCSubName: Full=Type IV pilus inner membrane protein PilC; chromosome CDS1637811 1218 + 0.550903
NA GSU2710 hypothetical protein chromosome CDS2987509 1257 - 0.611774
NA GSU0950 outer membrane efflux proteinRecName: Full=Protein CyaE; chromosome CDS1022466 1275 - 0.711373
NA GSU0781 twin-arginine translocation protein, TatA/E familyRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS841535 180 + 0.544444
NA GSU0329 general secretion pathway protein D, putativeSubName: Full=Type II secretion system lipoprotein GspD, putative; chromosome CDS358454 1899 - 0.599789
NA GSU0327 general secretion pathway protein FSubName: Full=Type II secretion system inner membrane protein GspF; chromosome CDS355703 1212 - 0.641089
NA GSU1491 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus biogenesis ATPase PilB; chromosome CDS1634843 1707 + 0.586409
NA GSU0314 general secretion protein E N-terminal domain proteinSubName: Full=GspIIEN domain protein; chromosome CDS345463 1104 + 0.606884
NA GSU2137 metal ion efflux outer membrane protein family protein, putative chromosome CDS2354577 1314 - 0.571537
NA GSU3398 metal ion efflux outer membrane protein family protein, putativeSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS3737064 1305 + 0.672031
NA GSU1778 type II secretion system protein, putativeSubName: Full=Type II secretion system secretin lipoprotein PulQ; chromosome CDS1940793 2469 - 0.549615
NA GSU1500 hypothetical protein chromosome CDS1645589 801 + 0.508115
NA GSU3120 conserved hypothetical proteinSubName: Full=CpxP superfamily protein; chromosome CDS3422490 477 + 0.631027
NA GSU0435 MSHA biogenesis protein MshE, putativeSubName: Full=PilB/PulE/GspE family ATPase; chromosome CDS466122 1650 + 0.657576
NA GSU1537 general secretion pathway protein-related proteinSubName: Full=Peptidoglycan-binding ATPase, putative; chromosome CDS1689563 1623 - 0.663586
NA GSU2695 outer membrane efflux proteinSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS2972298 1539 - 0.630929
NA GSU0022 mttA/Hcf106 family proteinRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS33252 336 + 0.622024
NA GSU2882 cytochrome c family protein chromosome CDS3157976 2067 - 0.671021
NA GSU1496 pilin domain proteinSubName: Full=Geopilin domain 1 protein; chromosome CDS1642257 273 + 0.490842
NA GSU2185 flgM family proteinSubName: Full=FlgM family protein; chromosome CDS2395116 309 - 0.592233
NA GSU0027 TolR proteinSubName: Full=Biopolymer transport membrane protein, TolR-related protein; chromosome CDS37322 420 - 0.597619
NA GSU0814 outer membrane efflux protein, putativeSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS873897 1359 - 0.666667
NA GSU2031 type IV pilus biogenesis protein PilNSubName: Full=Type IV pilus biogenesis protein PilN; chromosome CDS2223826 576 - 0.534722
NA GSU2028 type IV pilus biogenesis protein PilQSubName: Full=Type IV pilus secretin lipoprotein PilQ; chromosome CDS2219965 2685 - 0.591434
NA GSU0828 metal ion efflux outer membrane protein family protein, putative chromosome CDS887631 1287 + 0.644911
NA GSU1982 general secretion pathway protein-related protein chromosome CDS2172685 1182 - 0.587986
NA GSU2221 general secretion pathway protein-related proteinSubName: Full=ATPase, putative; chromosome CDS2435742 804 - 0.624378
NA GSU0787 twin-arginine translocation protein, TatA/E familyRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS847958 174 + 0.545977
NA GSU2143 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2360703 393 - 0.547074
NA GSU2029 lipoprotein, putativeSubName: Full=Type IV pilus assembly lipoprotein PilP; chromosome CDS2222660 549 - 0.575592
NA GSU0278 outer membrane efflux proteinSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS288582 1266 - 0.615324
NA GSU1482 outer membrane efflux proteinRecName: Full=Protein CyaE; chromosome CDS1622483 1281 - 0.619048
NA GSU2773 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS3053934 972 - 0.38786
NA GSU1063 hypothetical protein chromosome CDS1149578 366 + 0.576503
NA GSU1330 metal ion efflux outer membrane protein family protein, putative chromosome CDS1454915 1482 + 0.655196
NA GSU1781 hypothetical proteinSubName: Full=Type II secretion system protein PulN, putative; chromosome CDS1944452 540 - 0.524074
NA GSU1154 surface repeat protein, putativeSubName: Full=Surface repeat protein, putative; chromosome CDS1246831 14142 - 0.631311
NA GSU1618 hypothetical proteinSubName: Full=Protein phosphoaspartate phosphatase CheX; chromosome CDS1771700 864 - 0.585648
NA GSU2038 hypothetical proteinSubName: Full=Type IV pilus assembly protein PilY1; chromosome CDS2228907 5688 - 0.587729
NA GSU2030 type IV pilus biogenesis protein PilOSubName: Full=Type IV pilus biogenesis protein PilO; chromosome CDS2223192 597 - 0.536013
NA GSU2618 preprotein translocase, YajC subunitSubName: Full=Preprotein translocase, YajC subunit; chromosome CDS2888713 321 - 0.623053
NA GSU1066 hypothetical proteinSubName: Full=Type IV pilus assembly protein PilY1; chromosome CDS1151571 3045 + 0.612479
NA GSU2869 preprotein translocase, SecE subunit, putative chromosome CDS3145321 201 - 0.542289
NA GSU0279 cadherin domain/calx-beta domain proteinSubName: Full=Cadherin domain/calx-beta domain protein; chromosome CDS289984 17700 - 0.62887
NA GSU1486 MttB family proteinRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS1629155 867 + 0.557093
NA GSU1153 outer membrane protein, OMP85 familySubName: Full=Outer membrane lipoprotein; chromosome CDS1245146 1677 - 0.61121
NA GSU2122 TraG family proteinSubName: Full=TraG family protein; chromosome CDS2340674 1395 + 0.526882
NA GSU3317 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3642950 1110 + 0.654054
NA GSU0797 membrane protein, putativeSubName: Full=Membrane protein, MarC family; chromosome CDS855134 609 - 0.660098
NA GSU1782 conserved domain proteinSubName: Full=Type II secretion system ATPase PulM, putative; chromosome CDS1944991 924 - 0.579004
NA GSU0702 cytochrome c family proteinSubName: Full=Lipoprotein cytochrome c; chromosome CDS745179 5751 + 0.641106
NA GSU1646 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS1804716 1026 - 0.560429
NA GSU1251 BNR repeat domain proteinSubName: Full=ATS1 domain repeat protein; chromosome CDS1353842 6249 + 0.652264
NA GSU0412 flagellar assembly protein fliH, putativeSubName: Full=Flagellar assembly protein FliH; chromosome CDS443362 882 + 0.670068
NA GSU2911 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3204023 2502 - 0.660272
NA GSU1783 type IV pilus biogenesis protein PilB, putativeSubName: Full=Type II secretion system ATPase PulE; chromosome CDS1945917 1725 - 0.558841
NA GSU0391 Outer membrane efflux family protein chromosome CDS422509 1314 + 0.655251
NA GSU1609 outer membrane efflux proteinSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS1760201 1500 + 0.582667
NA GSU0025 tolB proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS35287 1299 - 0.61047
NA GSU3221 cytochrome c family proteinSubName: Full=Cytochrome c; chromosome CDS3532306 795 + 0.602516
NA GSU2899 high-molecular-weight cytochrome cSubName: Full=Lipoprotein cytochrome c; chromosome CDS3191201 2940 - 0.660204
NA GSU2609 type IV pilus assembly protein, putativeSubName: Full=PilB/PulE/GspE family ATPase; chromosome CDS2877043 1938 - 0.637255
NA GSU2032 type IV pilus biogenesis protein PilMSubName: Full=Type IV pilus biogenesis ATPase PilM; chromosome CDS2224395 1056 - 0.556818
clpP GSU1792 ATP-dependent Clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1957709 600 - 0.511667
drpA GSU2550 DNA processing protein DprASubName: Full=DNA protection single-strand-binding protein DprA; chromosome CDS2812608 1071 - 0.681606
ffH GSU0642 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS676434 1359 + 0.597498
flhA GSU3056 flagellar biosynthetic protein FlhASubName: Full=Flagellar biogenesis protein FlhA; chromosome CDS3357658 2091 - 0.623147
flhB GSU0426 flagellar biosynthetic protein FlhBSubName: Full=Flagellar biogenesis protein FlhB; chromosome CDS455349 1059 + 0.550519
fliE GSU0409 flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS440461 303 + 0.587459
fliF GSU0410 flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome CDS440788 1584 + 0.611111
fliI GSU0413 flagellum-specific ATP synthase FliISubName: Full=Flagellum-specific ATPase FliI; chromosome CDS444236 1326 + 0.625189
fliN GSU0422 flagellar motor switch protein FliNSubName: Full=Flagellar motor switch protein FliN; chromosome CDS452645 306 + 0.575163
fliP GSU0423 flagellar biosynthetic protein FliPSubName: Full=Flagellar biogenesis protein FliP; chromosome CDS453450 768 + 0.615885
fliQ GSU0424 flagellar biosynthetic protein FliQSubName: Full=Flagellar biogenesis protein FliQ; chromosome CDS454230 270 + 0.588889
fliR GSU0425 flagellar biosynthesis protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS454550 795 + 0.606289
fliS GSU3036 flagellar protein FliSSubName: Full=Flagellin export facilitator protein FliS; chromosome CDS3342430 435 - 0.556322
ftsY GSU1132 cell division protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS1217706 1053 + 0.609687
gspE GSU0328 general secretion pathway protein ESubName: Full=Type II secretion system ATPase GspE; chromosome CDS356895 1545 - 0.640777
gspG GSU0326 general secretion pathway protein GSubName: Full=Type II secretion system major pseudopilin GspG; chromosome CDS355233 444 - 0.603604
gspK GSU0322 general secretion pathway protein KRecName: Full=Type II secretion system protein K; chromosome CDS352860 921 - 0.619978
lepB GSU1267 signal peptidase ISubName: Full=Signal peptidase I; chromosome CDS1379195 669 + 0.560538
lspA GSU3135 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS3439285 483 - 0.614907
pilD GSU2043 type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS2238751 780 - 0.592308
pilT-1 GSU0146 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction protein; chromosome CDS162069 1161 + 0.638243
pilT-2 GSU0230 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction protein; chromosome CDS237886 1071 - 0.623716
pilT-3 GSU0436 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction protein; chromosome CDS467785 1071 + 0.625584
pilT-4 GSU1492 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction protein; chromosome CDS1636677 1098 + 0.598361
secA GSU2050 preprotein translocase, SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS2249292 2694 - 0.605048
secD GSU2617 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS2887086 1602 - 0.622347
secF GSU2616 protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS2886169 909 - 0.585259
secG GSU1627 preprotein translocase, SecG subunitSubName: Full=Preprotein translocase, SecG subunit; chromosome CDS1781917 369 - 0.598916
secY GSU2837 preprotein translocase, SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS3119208 1308 - 0.525994
sppA-1 GSU0820 signal peptide peptidase SppA, 36K typeSubName: Full=Signal peptide peptidase SppA; chromosome CDS880374 966 + 0.673913
sppA-2 GSU1234 signal peptide peptidase SppA, 36K type chromosome CDS1336399 783 + 0.628352
tolQ GSU0028 tolQ proteinSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS37751 678 - 0.597345