Gene list
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COG category: Intracellular trafficking and secretion
Genomic element: chromosome 1
Number of genes found: 63
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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RSP_1907 | Putative Flp pilus assembly protein ATPase CpaE | SubName: Full=Putative Flp pilus assembly protein ATPase CpaE; | chromosome 1 | CDS | 504100 | 1272 | - | 0.673742 |
NA | RSP_1647 | probable peptidase | SubName: Full=Putative peptidase; | chromosome 1 | CDS | 240494 | 960 | - | 0.764583 |
NA | RSP_1332 | H+-transporting two-sector ATPase, alpha/beta subunit | SubName: Full=H+-transporting two-sector ATPase, alpha/beta subunit; EC=3.6.3.14; | chromosome 1 | CDS | 3100881 | 1311 | + | 0.708619 |
NA | RSP_0033 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1736958 | 1014 | - | 0.770217 |
NA | RSP_1064 | Putative preprotein translocase, YidC | RecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; | chromosome 1 | CDS | 2821328 | 1872 | + | 0.659188 |
NA | RSP_1909 | Outer membrane general secretion pathway protein, Secretin | SubName: Full=Outer membrane general secretion pathway protein, Secretin; | chromosome 1 | CDS | 506365 | 1386 | - | 0.670996 |
NA | RSP_2896 | Multiple antibiotic transporter | SubName: Full=Multiple antibiotic transporter; | chromosome 1 | CDS | 1572150 | 621 | + | 0.694042 |
NA | RSP_0671 | ExbD/TolR family protein | SubName: Full=Cell division and transport-associated protein TolR; | chromosome 1 | CDS | 2412811 | 471 | - | 0.687898 |
NA | RSP_1310 | hypothetical protein | SubName: Full=Flagellar motor switch/type III secretory pathway protein; | chromosome 1 | CDS | 3084166 | 267 | - | 0.681648 |
NA | RSP_1674 | type 1 signal peptidase | chromosome 1 | CDS | 264610 | 840 | + | 0.645238 | |
NA | RSP_1129 | hypothetical protein | chromosome 1 | CDS | 2893278 | 285 | - | 0.708772 | |
NA | RSP_1903 | Putative Flp pilus assembly protein TadC | SubName: Full=Putative Flp pilus assembly protein TadC; | chromosome 1 | CDS | 500662 | 981 | - | 0.667686 |
NA | RSP_6157 | conserved hypoothetical protein | SubName: Full=Conserved hypoothetical protein; | chromosome 1 | CDS | 3180107 | 270 | + | 0.659259 |
NA | RSP_2177 | hypothetical protein | SubName: Full=DNA protecting protein DprA; | chromosome 1 | CDS | 781012 | 1119 | + | 0.762288 |
NA | RSP_1910 | Putative Flp pilus assembly protein CpaB | SubName: Full=Putative Flp pilus assembly protein CpaB; | chromosome 1 | CDS | 508004 | 825 | - | 0.673939 |
NA | RSP_0749 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2492660 | 216 | - | 0.625 |
NA | RSP_1872 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome 1 | CDS | 469645 | 1815 | - | 0.721212 |
NA | RSP_1328 | flagellar biosynthetic protein FliQ | SubName: Full=Flagellar biosynthetic protein FliQ; | chromosome 1 | CDS | 3099461 | 267 | - | 0.655431 |
NA | RSP_1905 | Putative Flp pilus assembly protein ATPase CpaF | SubName: Full=Putative Flp pilus assembly protein ATPase CpaF; | chromosome 1 | CDS | 502622 | 1458 | - | 0.681756 |
NA | RSP_0810 | conserved hypothetical membrane protein | SubName: Full=Uncharacterized protein involved in cysteine biosynthesis; | chromosome 1 | CDS | 2553355 | 693 | + | 0.670996 |
NA | RSP_1904 | Putative Flp pilus assembly protein TadB | SubName: Full=Putative Flp pilus assembly protein TadB; | chromosome 1 | CDS | 501646 | 969 | - | 0.649123 |
NA | RSP_0669 | Probable TolB protein precursor | RecName: Full=Protein TolB; Flags: Precursor; | chromosome 1 | CDS | 2410149 | 1335 | - | 0.706367 |
NA | RSP_0251 | Outer membrane efflux protein | SubName: Full=Outer membrane efflux protein; | chromosome 1 | CDS | 1974662 | 1401 | - | 0.692363 |
NA | RSP_0400 | hypothetical protein | SubName: Full=TadE-like protein; | chromosome 1 | CDS | 2132689 | 558 | + | 0.682796 |
NA | RSP_2675 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1318469 | 795 | - | 0.733333 |
NA | RSP_1705 | Putative preprotein translocase, SecE subunit | RecName: Full=Protein translocase subunit SecE; | chromosome 1 | CDS | 290047 | 195 | + | 0.646154 |
NA | RSP_2068 | putative ClpP-like protease | SubName: Full=Putative ClpP-like protease; | chromosome 1 | CDS | 661551 | 840 | - | 0.688095 |
LspA | RSP_1099 | signal peptidase II | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | chromosome 1 | CDS | 2857248 | 558 | - | 0.684588 |
SecD | RSP_1798 | Protein-export membrane protein secD | RecName: Full=Protein translocase subunit SecD; | chromosome 1 | CDS | 383391 | 1665 | + | 0.685886 |
TolQ | RSP_0672 | Biopolymer transport protein, TolQ | SubName: Full=Cell division and transport-associated protein TolQ; | chromosome 1 | CDS | 2413285 | 699 | - | 0.660944 |
YajC | RSP_1797 | Putative preprotein translocase subunit YajC | SubName: Full=Protein translocase subunit yajC; | chromosome 1 | CDS | 383049 | 327 | + | 0.59633 |
ccmD | RSP_1804 | Heme exporter protein D | SubName: Full=Heme exporter protein D; | chromosome 1 | CDS | 388695 | 162 | + | 0.697531 |
clpP | RSP_0197 | Protease subunit of ATP-dependent Clp proteases | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome 1 | CDS | 1912600 | 633 | - | 0.633491 |
exbB | RSP_0920 | Biopolymer transport protein, ExbB | SubName: Full=Outer membrane transport energization protein ExbB; | chromosome 1 | CDS | 2670024 | 1050 | + | 0.742857 |
exbD | RSP_0921 | biopolymer transport protein, ExbD | SubName: Full=Outer membrane transport energization protein ExbD; | chromosome 1 | CDS | 2671077 | 426 | + | 0.673709 |
ffh | RSP_1053 | Signal recognition particle protein ffh | RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; | chromosome 1 | CDS | 2810208 | 1518 | - | 0.676548 |
fhlB | RSP_1322 | flagellar biosynthesis pathway, component FlhB | SubName: Full=Flagellar biosynthesis pathway, component FlhB; | chromosome 1 | CDS | 3094854 | 1080 | + | 0.67037 |
flgK1 | RSP_0074 | FlgK flagellar hook-associated protein 1 | SubName: Full=FlgK flagellar hook-associated protein 1; | chromosome 1 | CDS | 1782230 | 4092 | - | 0.745846 |
flgM | RSP_0037 | Putative FlgM, negative regulator of flagellin synthesis | SubName: Full=Anti-sigma-28 factor, FlgM family; | chromosome 1 | CDS | 1742579 | 315 | + | 0.650794 |
flhA | RSP_0034 | flagellar biosynthesis protein, FlhA | SubName: Full=Flagellar biosynthesis protein, FlhA; | chromosome 1 | CDS | 1737975 | 2115 | - | 0.704965 |
flhA | RSP_1320 | Flagellar biosynthesis pathway, component FlhA | SubName: Full=Flagellar biosynthesis pathway, component FlhA; | chromosome 1 | CDS | 3092012 | 2067 | + | 0.648283 |
flhB | RSP_0066 | Flagellar protein FlhB | SubName: Full=Flagellar protein FlhB; | chromosome 1 | CDS | 1771421 | 1143 | + | 0.696413 |
fliE | RSP_1329 | putative flagellar hook-basal body complex protein | SubName: Full=Putative flagellar hook-basal body complex protein; | chromosome 1 | CDS | 3099727 | 291 | - | 0.666667 |
fliE | RSP_0052 | flagellar protein FliE | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome 1 | CDS | 1759262 | 324 | + | 0.70679 |
fliF | RSP_1312 | putative flagellar M-ring protein | chromosome 1 | CDS | 3085015 | 1530 | - | 0.70915 | |
fliF1 | RSP_0053 | Flagellar FliF M-ring protein | RecName: Full=Flagellar M-ring protein; | chromosome 1 | CDS | 1759605 | 1713 | + | 0.727963 |
fliI | RSP_0056 | FliI, Flagellum-specific ATPase | SubName: Full=FliI, Flagellum-specific ATPase; EC=3.6.3.14; | chromosome 1 | CDS | 1763166 | 1329 | + | 0.719338 |
fliN | RSP_0061 | Flagellar motor switch FliN protein | SubName: Full=Flagellar motor switch FliN protein; | chromosome 1 | CDS | 1768772 | 297 | + | 0.686869 |
fliP | RSP_1309 | Type III secretion system inner membrane P protein | chromosome 1 | CDS | 3083450 | 720 | - | 0.673611 | |
fliP | RSP_0063 | Flagellar transport protein FliP | SubName: Full=Flagellar transport protein FliP; | chromosome 1 | CDS | 1769454 | 906 | + | 0.683223 |
fliQ | RSP_0064 | Flagellar protein FliQ | SubName: Full=Flagellar protein FliQ; | chromosome 1 | CDS | 1770359 | 267 | + | 0.625468 |
fliR | RSP_0065 | Flagellar protein FliR | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome 1 | CDS | 1770625 | 810 | + | 0.718518 |
fliR | RSP_1321 | Flagellar biosynthesis pathway, component FliR | SubName: Full=Flagellar biosynthesis pathway, component FliR; | chromosome 1 | CDS | 3094075 | 783 | + | 0.64751 |
fliS | RSP_0040 | putative flagellar protein FliS | SubName: Full=Putative flagellar protein FliS; | chromosome 1 | CDS | 1745872 | 381 | - | 0.671916 |
ftsY | RSP_1843 | Signal recognition particle-docking protein FtsY | chromosome 1 | CDS | 433992 | 1182 | - | 0.712352 | |
secA | RSP_1169 | preprotein translocase, SecA subunit, ATPase | RecName: Full=Protein translocase subunit SecA; | chromosome 1 | CDS | 2933162 | 2727 | + | 0.657132 |
secB | RSP_1237 | Preprotein translocase subunit SecB | chromosome 1 | CDS | 3007974 | 528 | - | 0.642045 | |
secF | RSP_1799 | protein-export membrane protein SecF | RecName: Full=Protein translocase subunit SecF; | chromosome 1 | CDS | 385065 | 975 | + | 0.638974 |
secY | RSP_1735 | Preprotein translocase SecY subunit | RecName: Full=Protein translocase subunit SecY; | chromosome 1 | CDS | 317640 | 1359 | + | 0.640912 |
sohB | RSP_1076 | Peptidase family S49 | SubName: Full=Peptidase family S49; EC=3.4.21.-; | chromosome 1 | CDS | 2832130 | 798 | - | 0.68797 |
tatA | RSP_2540 | twin-arginine translocation system protein, TatA | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome 1 | CDS | 1184186 | 213 | + | 0.615023 |
tatB | RSP_6059 | twin-arginine translocation system protein, TatB | RecName: Full=Sec-independent protein translocase protein TatB; | chromosome 1 | CDS | 1184409 | 477 | + | 0.716981 |
tatC | RSP_2541 | twin-arginine translocation system protein, TatC | RecName: Full=Sec-independent protein translocase protein TatC; | chromosome 1 | CDS | 1184882 | 870 | + | 0.631034 |