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2024-06-17 05:34:26

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 109

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Dechloromonas aromatica RCB, RCB
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Daro_0771 Flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS838221 696 - 0.576149
NA Daro_3375 Twin-arginine translocation protein TatA/ERecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS3633241 231 - 0.558442
NA Daro_3210 MotA/TolQ/ExbB proton channelSubName: Full=MotA/TolQ/ExbB proton channel; chromosome CDS3460570 606 - 0.594059
NA Daro_3036 putative Tfp pilus assembly protein tip-associated adhesin PilY1SubName: Full=Putative Tfp pilus assembly protein tip-associated adhesin PilY1; Flags: Precursor; chromosome CDS3278079 4635 - 0.507228
NA Daro_3209 Biopolymer transport protein ExbD/TolRSubName: Full=Biopolymer transport protein ExbD/TolR; chromosome CDS3460153 414 - 0.594203
NA Daro_2655 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2850196 591 + 0.646362
NA Daro_2254 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2440339 1311 - 0.641495
NA Daro_1151 type II secretion system protein E:General secretory system II, protein E, N-terminalSubName: Full=Type II secretion system protein E:General secretory system II, protein E, N-terminal; chromosome CDS1255520 1869 + 0.591225
NA Daro_3039 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3284370 387 - 0.547804
NA Daro_0761 Flagellar biosynthesis protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS830981 783 - 0.560664
NA Daro_4053 TolB, N-terminal:WD40-like Beta PropellerRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS4351886 1314 - 0.613394
NA Daro_1877 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2019051 1242 - 0.640097
NA Daro_2478 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2676095 1251 + 0.670663
NA Daro_0927 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1005941 1056 - 0.5625
NA Daro_3718 Cell division transporter substrate-binding protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS3997077 1086 - 0.615101
NA Daro_3408 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS3659988 1200 + 0.596667
NA Daro_3926 Type I secretion outer membrane protein, TolCSubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; chromosome CDS4221189 1326 + 0.586727
NA Daro_0894 general secretion pathway protein, ATPaseSubName: Full=General secretion pathway protein, ATPase; chromosome CDS967195 828 + 0.619565
NA Daro_1165 Outer membrane efflux proteinRecName: Full=Protein CyaE; Flags: Precursor; chromosome CDS1269411 1389 + 0.650828
NA Daro_3280 SecD/SecF/SecDF export membrane protein:SecD export membrane proteinRecName: Full=Protein translocase subunit SecD; chromosome CDS3530650 1878 + 0.633653
NA Daro_2628 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2828159 1299 - 0.6505
NA Daro_0211 Fimbrial assemblySubName: Full=Fimbrial assembly; Flags: Precursor; chromosome CDS227822 570 + 0.498246
NA Daro_2401 ATPasSubName: Full=ATPase; chromosome CDS2589019 1077 + 0.506964
NA Daro_3222 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS3473088 1185 + 0.644726
NA Daro_0213 Pilus assembly protein, PilQSubName: Full=Pilus assembly protein, PilQ; Flags: Precursor; chromosome CDS229068 546 + 0.5
NA Daro_2009 Peptidase S49SubName: Full=Peptidase S49; chromosome CDS2165074 963 + 0.541018
NA Daro_2987 TPR repeatSubName: Full=TPR repeat; Flags: Precursor; chromosome CDS3225279 801 - 0.54432
NA Daro_3199 VCBSSubName: Full=VCBS protein; chromosome CDS3435124 14565 - 0.644696
NA Daro_3216 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminalSubName: Full=Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal; Flags: Precursor; chromosome CDS3468531 2004 + 0.629741
NA Daro_3223 type II secretion system protein ESubName: Full=Type II secretion system protein E; chromosome CDS3474282 1695 + 0.656047
NA Daro_2107 probable activation/secretion signal peptide proteinSubName: Full=Probable activation/secretion signal peptide protein; Flags: Precursor; chromosome CDS2274859 1647 + 0.587128
NA Daro_2195 Type IV pilus assembly PilZSubName: Full=Type IV pilus assembly PilZ; chromosome CDS2371391 363 - 0.578512
NA Daro_1386 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1517007 804 - 0.539801
NA Daro_0214 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminalSubName: Full=Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal; Flags: Precursor; chromosome CDS229610 2148 + 0.503259
NA Daro_0212 Pilus assembly protein, PilOSubName: Full=Pilus assembly protein, PilO; Flags: Precursor; chromosome CDS228388 684 + 0.472222
NA Daro_3919 RND efflux system, outer membrane lipoprotein, NodTSubName: Full=RND efflux system, outer membrane lipoprotein, NodT; Flags: Precursor; chromosome CDS4213473 1470 - 0.665986
NA Daro_0747 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS818997 285 - 0.547368
NA Daro_3040 General secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome CDS3284774 534 - 0.52809
NA Daro_4055 Biopolymer transport protein ExbD/TolRSubName: Full=Cell division and transport-associated protein TolR; chromosome CDS4354032 408 - 0.568627
NA Daro_3405 type II and III secretion system proteinSubName: Full=Type II and III secretion system protein; Flags: Precursor; chromosome CDS3655224 1785 + 0.577591
NA Daro_1176 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS1280506 1290 + 0.623256
NA Daro_0019 SMF proteinSubName: Full=DNA protecting protein DprA; chromosome CDS24827 1077 - 0.61467
NA Daro_4201 60 kDa inner membrane insertion proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS4498621 1644 - 0.56691
NA Daro_0306 SecE subunit of protein translocation complexRecName: Full=Protein translocase subunit SecE; Flags: Precursor; chromosome CDS349092 354 + 0.542373
NA Daro_3038 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3283367 999 - 0.536537
NA Daro_3279 YajCSubName: Full=Protein translocase subunit yajC; chromosome CDS3530275 327 + 0.584098
NA Daro_2322 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2502913 597 + 0.653266
NA Daro_0642 Signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS705060 1368 + 0.57383
NA Daro_3041 general secretion pathway protein HSubName: Full=General secretion pathway protein H; Flags: Precursor; chromosome CDS3285301 417 - 0.489209
NA Daro_3374 Twin-arginine translocation protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS3632833 363 - 0.597796
NA Daro_1718 Peptidase S14, ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1846434 630 - 0.584127
NA Daro_2320 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS2499984 2568 + 0.614875
NA Daro_2624 lipoprotein signal peptidase-like proteinRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; Flags: Precursor; chromosome CDS2823130 336 - 0.559524
NA Daro_2691 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2885129 2094 - 0.592646
NA Daro_2630 Peptidase A8, signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS2830163 501 - 0.606786
NA Daro_2653 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS2847267 2568 + 0.61176
NA Daro_2803 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS3010652 1245 + 0.661847
NA Daro_3217 Prokaryotic N-terminal methylation siteSubName: Full=Prokaryotic N-terminal methylation site; Flags: Precursor; chromosome CDS3470531 480 + 0.641667
NA Daro_2027 Peptidase S26A, signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; Flags: Precursor; chromosome CDS2180236 789 + 0.493029
NA Daro_0739 Flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS810661 1140 + 0.558772
NA Daro_2620 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2820251 1299 - 0.659738
NA Daro_3356 Fimbrial protein pilin:Bacterial general secretion pathway protein HSubName: Full=Fimbrial protein pilin:Bacterial general secretion pathway protein H; Flags: Precursor; chromosome CDS3613758 414 - 0.502415
NA Daro_0966 type II secretion system protein E:Response regulator receiver:General secretory system II, protein E, N-terminalSubName: Full=Type II secretion system protein E:Response regulator receiver:General secretory system II, protein E, N-terminal; chromosome CDS1049883 2241 - 0.606426
NA Daro_3745 Protein of unknown function DUF1555SubName: Full=Uncharacterized protein; chromosome CDS4025770 585 + 0.523077
NA Daro_1114 Biopolymer transport protein ExbD/TolRSubName: Full=Outer membrane transport energization protein ExbD; chromosome CDS1217329 426 - 0.600939
NA Daro_3994 heme exporter protein DSubName: Full=Heme exporter protein D; Flags: Precursor; chromosome CDS4293652 201 + 0.557214
NA Daro_2263 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS2448953 1275 + 0.606274
NA Daro_0763 Flagellar transport protein FliPSubName: Full=Flagellar transport protein FliP; Flags: Precursor; chromosome CDS832031 747 - 0.543507
NA Daro_0769 Flagellar FliJ and relatedSubName: Full=Flagellar FliJ and related protein; chromosome CDS836356 456 - 0.539474
NA Daro_0613 protein export chaperone SecBRecName: Full=Protein-export protein SecB; chromosome CDS681384 459 + 0.562092
NA Daro_0637 Peptidase A24A, prepilin type IV:Peptidase A24A, N-terminalRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS699018 855 - 0.575439
NA Daro_0879 type II secretion system protein E:General secretory system II, protein E, N-terminalSubName: Full=Type II secretion system protein E:General secretory system II, protein E, N-terminal; chromosome CDS952232 1710 + 0.600585
NA Daro_3404 ATPasSubName: Full=ATPase; chromosome CDS3653738 1380 + 0.610145
NA Daro_0866 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS937380 3111 + 0.57152
NA Daro_0762 Flagellar biosynthesis protein FliQSubName: Full=Flagellar biosynthesis protein FliQ; chromosome CDS831765 252 - 0.543651
NA Daro_3045 Peptidase A8, signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS3287977 480 - 0.591667
NA Daro_3221 General secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome CDS3472606 471 + 0.624204
NA Daro_4056 MotA/TolQ/ExbB proton channelSubName: Full=Cell division and transport-associated protein TolQ; chromosome CDS4354443 678 - 0.594395
NA Daro_0210 Type IV pilus assembly protein PilMSubName: Full=Type IV pilus assembly protein PilM; Flags: Precursor; chromosome CDS226740 1086 + 0.531308
NA Daro_1926 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2073316 624 + 0.544872
NA Daro_2162 RND efflux system, outer membrane lipoprotein, NodTSubName: Full=RND efflux system, outer membrane lipoprotein, NodT; chromosome CDS2334288 1428 + 0.642857
NA Daro_0893 type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminalSubName: Full=Type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminal; Flags: Precursor; chromosome CDS965404 1758 + 0.608646
NA Daro_1115 MotA/TolQ/ExbB proton channelSubName: Full=Outer membrane transport energization protein ExbB; chromosome CDS1217756 744 - 0.638441
NA Daro_3218 general secretion pathway protein GSubName: Full=General secretion pathway protein G; Flags: Precursor; chromosome CDS3471013 381 + 0.656168
NA Daro_2106 Filamentous haemagglutinin, N-terminalSubName: Full=Filamentous hemagglutinin, N-terminal; chromosome CDS2268611 6240 + 0.614263
NA Daro_0261 Protein of unknown function DUF107SubName: Full=Uncharacterized protein; chromosome CDS303705 441 - 0.61678
NA Daro_0773 Flagellar FliF M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS839925 1755 - 0.57208
NA Daro_0639 type II secretion system protein E:General secretory system II, protein E, N-terminalSubName: Full=Type II secretion system protein E:General secretory system II, protein E, N-terminal; chromosome CDS701114 1716 - 0.555944
NA Daro_0638 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS699872 1227 - 0.535452
NA Daro_0776 Flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS844396 324 + 0.537037
NA Daro_0740 Flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; Flags: Precursor; chromosome CDS811801 2085 + 0.566427
NA Daro_0339 SecY proteinRecName: Full=Protein translocase subunit SecY; chromosome CDS374907 1323 + 0.525321
NA Daro_1725 Pilus retraction protein PilTSubName: Full=Pilus retraction protein PilT; chromosome CDS1853326 1188 - 0.576599
NA Daro_3882 Pilus retraction protein PilTSubName: Full=Pilus retraction protein PilT; chromosome CDS4175507 1137 - 0.581354
NA Daro_0880 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS953947 1221 + 0.592138
NA Daro_3373 Sec-independent periplasmic protein translocaseRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS3632009 828 - 0.559179
NA Daro_3369 Peptidoglycan-binding LysMSubName: Full=Peptidoglycan-binding LysM; chromosome CDS3627475 1797 + 0.586533
NA Daro_3281 SecD/SecF/SecDF export membrane protein:SecF proteinRecName: Full=Protein-export membrane protein SecF; chromosome CDS3532540 945 + 0.584127
NA Daro_3827 RND efflux system, outer membrane lipoprotein, NodTSubName: Full=RND efflux system, outer membrane lipoprotein, NodT; chromosome CDS4114760 1515 - 0.69637
NA Daro_1214 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1317948 1833 + 0.57665
NA Daro_0781 Flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS847242 408 - 0.563725
NA Daro_3407 type II secretion system protein E:General secretory system II, protein E, N-terminalSubName: Full=Type II secretion system protein E:General secretory system II, protein E, N-terminal; chromosome CDS3658279 1707 + 0.616872
NA Daro_3488 SecA proteinRecName: Full=Protein translocase subunit SecA; chromosome CDS3735877 2715 - 0.601473
NA Daro_3883 Pilus retraction protein PilTSubName: Full=Pilus retraction ATPase PilT; chromosome CDS4176677 1044 - 0.563218
NA Daro_0294 Outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS335325 1263 + 0.631829
NA Daro_0770 ATPase FliI/YscNSubName: Full=ATPase FliI/YscN; chromosome CDS836818 1419 - 0.600423
NA Daro_3920 probable lipoprotein signal peptideSubName: Full=Probable lipoprotein signal peptide; chromosome CDS4215083 396 - 0.633838
NA Daro_0948 Preprotein translocase SecG subunitSubName: Full=Protein translocase subunit secG; chromosome CDS1028887 372 + 0.553763
NA Daro_0765 Type III secretion system outer membrane O proteinSubName: Full=Type III secretion system outer membrane O protein; chromosome CDS833234 444 - 0.560811