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2024-06-02 16:40:50

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 119

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Bd1587 general secretory pathway protein KSubName: Full=General secretory pathway protein K; Flags: Precursor; chromosome CDS1517580 1236 - 0.536408
NA Bd2376 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS2281489 456 - 0.506579
NA Bd3059 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS2969071 1530 - 0.506536
NA Bd2740 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2661728 1884 + 0.546178
NA Bd0419 putative Adventurous gliding motility protein VSubName: Full=Putative Adventurous gliding motility protein V; chromosome CDS397350 450 - 0.535556
NA Bd0704 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; chromosome CDS656211 4098 + 0.534407
NA Bd0782 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS737741 765 + 0.524183
NA Bd0874 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS826055 744 - 0.5
NA Bd0674 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS624580 834 - 0.464029
NA Bd2088 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS1999663 3777 + 0.538258
NA Bd0632 hypothetical protein with similarity to TolBSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS587940 2955 - 0.530288
NA Bd2053 component of the Tol biopolymer transport systemSubName: Full=Component of the Tol biopolymer transport system; Flags: Precursor; chromosome CDS1958737 2925 - 0.508718
NA Bd1797 SubName: Full=Putative outer membrane protein tolC; Flags: Precursor; chromosome CDS1722732 1458 + 0.537723
NA Bd3438 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS3350109 1026 + 0.508772
NA Bd3266 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS3181757 4704 + 0.544643
NA Bd2133 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2038592 3096 + 0.54199
NA Bd2323 SubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2219970 3192 - 0.524436
NA Bd2819 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS2726222 573 + 0.514834
NA Bd2565 phage related tail fibre proteinSubName: Full=Phage related tail fibre protein; chromosome CDS2477730 3495 - 0.539914
NA Bd1589 putative general secretion pathway protein ISubName: Full=Putative general secretion pathway protein I; Flags: Precursor; chromosome CDS1519716 501 - 0.48503
NA Bd2734 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS2656033 2532 - 0.543839
NA Bd0880 putative periplasmic protein cpxPSubName: Full=Putative periplasmic protein cpxP; Flags: Precursor; chromosome CDS831842 435 + 0.510345
NA Bd1408 outer membrane proteinSubName: Full=Outer membrane protein; Flags: Precursor; chromosome CDS1329638 1389 - 0.518359
NA Bd1591 General secretion pathway protein G precursorSubName: Full=General secretion pathway protein G; Flags: Precursor; chromosome CDS1520803 411 - 0.454988
NA Bd3246 hypothetical protein predicted by Glimmer/CriticaRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS3161956 933 + 0.513398
NA Bd1915 putative outer membrane secretion proteinSubName: Full=Putative outer membrane secretion protein; Flags: Precursor; chromosome CDS1829447 1314 + 0.523592
NA Bd0707 FusA/NodT family proteinSubName: Full=FusA/NodT family protein; Flags: Precursor; chromosome CDS665280 1281 + 0.498829
NA Bd3010 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2908846 1461 - 0.524983
NA Bd3267 putative cell wall surface anchor family proteinSubName: Full=Putative cell wall surface anchor family protein; Flags: Precursor; chromosome CDS3186533 4524 + 0.537135
NA Bd1334 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; chromosome CDS1258434 3456 - 0.560185
NA Bd0249 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS234407 624 - 0.533654
NA Bd2548 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS2458757 4983 - 0.510335
NA Bd2872 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS2781638 1881 + 0.558745
NA Bd1712 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS1645920 4098 - 0.544412
NA Bd0726 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS682443 5880 + 0.558503
NA Bd2582 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS2494985 4251 - 0.552576
NA Bd2439 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS2347089 3324 - 0.564982
NA Bd0688 putative hemagglutinin/hemolysin-related proteinSubName: Full=Putative hemagglutinin/hemolysin-related protein; chromosome CDS635439 3204 - 0.540886
NA Bd2875 putative hemagglutinin/hemolysin-related proteinSubName: Full=Putative hemagglutinin/hemolysin-related protein; Flags: Precursor; chromosome CDS2785252 4914 + 0.537851
NA Bd3182 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS3101974 2769 + 0.562297
NA Bd1595 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome CDS1523173 1218 - 0.50821
NA Bd0884 cell wall surface anchor family proteinSubName: Full=Cell wall surface anchor family protein; Flags: Precursor; chromosome CDS834489 3447 + 0.54163
NA Bd3651 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS3544312 390 - 0.5
NA Bd3356 putative TolB proteinSubName: Full=Putative TolB protein; chromosome CDS3268088 3846 - 0.50832
NA Bd2725 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2646155 489 - 0.498978
NA Bd1596 predicted ATPases involved in pili biogenesis, PilB homologsSubName: Full=Predicted ATPases involved in pili biogenesis, PilB homologs; chromosome CDS1524471 1695 - 0.513864
NA Bd1480 TolR-like protein, putativeSubName: Full=TolR-like protein, putative; chromosome CDS1401843 558 - 0.494624
CpaB Bd0113 putative flp pilus assembly protein CpaBSubName: Full=Putative flp pilus assembly protein CpaB; chromosome CDS103592 906 - 0.527594
PilQ Bd0112 putative pilus assembly transmembrane proteinSubName: Full=Putative pilus assembly transmembrane protein; Flags: Precursor; chromosome CDS102028 1530 - 0.516993
TadB Bd0110 SubName: Full=TadB protein; chromosome CDS98877 876 - 0.493151
aglR Bd0836 Adventurous gliding motility protein RSubName: Full=Adventurous gliding motility protein R; chromosome CDS786752 666 + 0.490991
aglR Bd0420 putative adventurous gliding motility protein RSubName: Full=Putative adventurous gliding motility protein R; chromosome CDS397796 747 - 0.483266
aglR Bd2377 Adventurous gliding motility protein RSubName: Full=Adventurous gliding motility protein R; chromosome CDS2281961 735 - 0.489796
aglR Bd1481 Adventurous gliding motility protein RSubName: Full=Adventurous gliding motility protein R; Flags: Precursor; chromosome CDS1402444 711 - 0.520394
aglS Bd1479 Adventurous gliding motility protein SSubName: Full=Adventurous gliding motility protein S; chromosome CDS1401336 504 - 0.488095
aglS Bd0838 Adventurous gliding motility protein SSubName: Full=Adventurous gliding motility protein S; chromosome CDS787906 591 + 0.514382
aglS Bd2375 Adventurous gliding motility protein SSubName: Full=Adventurous gliding motility protein S; chromosome CDS2280981 528 - 0.488636
aglV Bd0181 Adventurous gliding motility protein VSubName: Full=Adventurous gliding motility protein V; chromosome CDS169233 417 - 0.491607
aglW Bd0179 Adventurous gliding motility protein WRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS166965 1386 - 0.520202
aglX Bd0182 Adventurous gliding motility protein XSubName: Full=Adventurous gliding motility protein X; chromosome CDS169652 738 - 0.47832
clpP Bd3754 ATP-dependent Clp protease proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS3627749 639 - 0.497653
cpaF Bd3307 Flp pilus assembly protein, ATPaseSubName: Full=Flp pilus assembly protein, ATPase; chromosome CDS3225048 1110 + 0.532432
cpaF Bd0793 cpaF proteinSubName: Full=CpaF protein; chromosome CDS743493 1107 + 0.520325
flgD Bd3397 basal-body rod modification protein flgDSubName: Full=Basal-body rod modification protein flgD; chromosome CDS3308006 1005 - 0.476617
flgM Bd0537 FlgM, negative regulator of flagellin synthesisSubName: Full=FlgM, negative regulator of flagellin synthesis; chromosome CDS500430 330 + 0.457576
flhA Bd3321 flagella-associated proteinSubName: Full=Flagella-associated protein; chromosome CDS3235898 2100 - 0.527143
flhB Bd3322 flagella-associated proteinSubName: Full=Flagella-associated protein; chromosome CDS3237997 1062 - 0.512241
fliE Bd3405 RecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS3316963 336 - 0.485119
fliF Bd3404 flagellar M-ring proteinRecName: Full=Flagellar M-ring protein; Flags: Precursor; chromosome CDS3315288 1650 - 0.513939
fliH Bd3402 flagellar assembly proteinSubName: Full=Flagellar assembly protein; chromosome CDS3313482 786 - 0.506361
fliI Bd3401 flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS3312154 1329 - 0.550038
fliJ Bd3400 flagellar basal body formation protein fliJSubName: Full=Flagellar basal body formation protein fliJ; chromosome CDS3311692 450 - 0.466667
fliN Bd3327 flagellar motor switch protein FliNSubName: Full=Flagellar motor switch protein FliN; chromosome CDS3241586 369 - 0.533875
fliP Bd3325 flagellar protein required for flagellar formationSubName: Full=Flagellar protein required for flagellar formation; Flags: Precursor; chromosome CDS3240151 759 - 0.492754
fliQ Bd3324 flagellar biosynthetic protein FliQSubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS3239870 273 - 0.509158
fliR Bd3323 flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS3239091 780 - 0.510256
fliS Bd0611 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS572029 411 + 0.462287
ftsY Bd1173 signal recognition particle-docking protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS1114849 1209 + 0.514475
gspC Bd1598 general secretion pathway protein CSubName: Full=General secretion pathway protein C; chromosome CDS1528572 915 - 0.499454
gspD Bd1597 general secretion pathway protein DSubName: Full=General secretion pathway protein D; Flags: Precursor; chromosome CDS1526171 2298 - 0.501741
gspD Bd3510 general secretion pathway protein DSubName: Full=General secretion pathway protein D; Flags: Precursor; chromosome CDS3417364 669 + 0.521674
has Bd2228 HAS ABC exporter outer membrane componentSubName: Full=HAS ABC exporter outer membrane component; Flags: Precursor; chromosome CDS2126642 1215 + 0.53251
lepB Bd0852 SubName: Full=LepB protein; EC=3.4.21.89; chromosome CDS798977 789 + 0.494297
lepB Bd0853 SubName: Full=LepB protein; EC=3.4.21.89; chromosome CDS799766 708 + 0.488701
lepB Bd0854 SubName: Full=LepB protein; EC=3.4.21.89; chromosome CDS800550 675 + 0.517037
lspA Bd3365 RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS3278962 510 + 0.496078
pilA Bd1290 fimbrial protein pilASubName: Full=Fimbrial protein pilA; Flags: Precursor; chromosome CDS1223248 573 + 0.483421
pilB Bd1509 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus biogenesis protein PilB; chromosome CDS1429968 1701 + 0.506173
pilC Bd1511 pilC; bacterial type II secretion system proteinSubName: Full=PilC; bacterial type II secretion system protein; chromosome CDS1432713 1218 + 0.525452
pilD Bd0862 leader peptidase (prepilin peptidase)RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS809503 780 + 0.512821
pilM Bd0863 fimbrial assembly membrane proteinSubName: Full=Fimbrial assembly membrane protein; chromosome CDS810453 1056 + 0.517045
pilM Bd1585 putative type 4 fimbrial biogenesis protein PilMSubName: Full=Putative type 4 fimbrial biogenesis protein PilM; chromosome CDS1514149 1974 - 0.518237
pilN Bd0864 fimbrial assembly membrane proteinSubName: Full=Fimbrial assembly membrane protein; chromosome CDS811505 612 + 0.506536
pilO Bd0865 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein pilO; Flags: Precursor; chromosome CDS812109 594 + 0.510101
pilP Bd0866 fimbrial assembly proteinSubName: Full=Fimbrial assembly protein; EC=3.4.24.-; Flags: Precursor; chromosome CDS812699 684 + 0.53655
pilQ Bd0867 fimbrial assembly proteinSubName: Full=Fimbrial assembly protein; Flags: Precursor; chromosome CDS813406 2181 + 0.526364
pilQ Bd3306 flp pilus assembly proteinSubName: Full=Flp pilus assembly protein; chromosome CDS3223750 1302 + 0.530722
pilT Bd1510 pilT; twitching motility protein PilTSubName: Full=PilT; twitching motility protein PilT; chromosome CDS1431668 1044 + 0.527778
pilT Bd3852 twitching motility proteinSubName: Full=Twitching motility protein; chromosome CDS3717376 1104 + 0.526268
secA Bd0272 preprotein translocase SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS258157 2670 + 0.498876
secD Bd2234 SecD, protein-export membrane proteinRecName: Full=Protein translocase subunit SecD; chromosome CDS2132330 1695 - 0.496755
secF Bd2233 protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS2131382 939 - 0.466454
secY Bd2955 preprotein translocase SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS2863774 1329 - 0.470278
smf Bd2472 putative DNA processing protein (Smf family)SubName: Full=Putative DNA processing protein (Smf family); chromosome CDS2375103 948 - 0.535865
sohB Bd2188 SohB protein, peptidase U7 familySubName: Full=SohB protein, peptidase U7 family; EC=3.4.21.-; Flags: Precursor; chromosome CDS2087877 1020 + 0.506863
sppA Bd1067 signal peptide peptidaseSubName: Full=Signal peptide peptidase; EC=3.4.21.-; Flags: Precursor; chromosome CDS1013879 969 + 0.505676
srp54 Bd2123 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS2029519 1353 - 0.504065
tadC Bd0470 Flp pilus assembly protein TadCSubName: Full=Flp pilus assembly protein TadC; Flags: Precursor; chromosome CDS440047 777 + 0.518661
tatA Bd2572 twin-arginine-dependent translocase proteinRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS2485728 246 - 0.455285
tatB Bd3866 putative sec-independent protein translocase proteinSubName: Full=Putative sec-independent protein translocase protein; chromosome CDS3728815 357 - 0.512605
tatC Bd3865 sec-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS3728057 762 - 0.502625
tatE Bd2196 twin-argine protein translocase componentRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS2096480 240 + 0.445833
tolC Bd0887 outer membrane export factorSubName: Full=Outer membrane export factor; Flags: Precursor; chromosome CDS840003 1305 + 0.527203
tolC Bd0999 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; Flags: Precursor; chromosome CDS944394 1485 - 0.517845
tolQ Bd0477 tolQ proteinSubName: Full=TolQ protein; chromosome CDS448607 630 + 0.503175
tolR Bd0478 TonB system transport protein ExbD2SubName: Full=TonB system transport protein ExbD2; chromosome CDS449239 405 + 0.491358
tolR Bd0837 tolR proteinSubName: Full=TolR protein; chromosome CDS787430 477 + 0.490566
yajC Bd2235 preprotein translocase YajC subunitSubName: Full=Preprotein translocase YajC subunit; chromosome CDS2134024 354 - 0.466102
yidC Bd3912 60 KD inner-membrane proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS3780428 1620 - 0.47963