Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Genomic element: chromosome 1
Number of genes found: 104
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Burkholderia pseudomallei K96243, K96243 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | BPSL0784 | putative exported protein | SubName: Full=Putative exported protein; | chromosome 1 | CDS | 912788 | 474 | + | 0.672996 |
| NA | BPSL1892 | putative fimbriae-related outer membrane protein | SubName: Full=Putative fimbriae-related outer membrane protein; | chromosome 1 | CDS | 2253426 | 1008 | - | 0.731151 |
| NA | BPSL2456 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 2962365 | 288 | + | 0.611111 |
| NA | BPSL0078 | putative membrane protein | RecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; | chromosome 1 | CDS | 88374 | 1677 | + | 0.641622 |
| NA | BPSL1631 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; | chromosome 1 | CDS | 1889771 | 3375 | + | 0.66963 |
| NA | BPSL1661 | putative hemolysin-related protein | SubName: Full=Putative hemolysin-related protein; | chromosome 1 | CDS | 1925148 | 9690 | + | 0.652012 |
| NA | BPSL1815 | putative fimbriae assembly-related protein | SubName: Full=Putative fimbriae assembly-related protein; | chromosome 1 | CDS | 2162248 | 1575 | - | 0.711111 |
| NA | BPSL1972 | putative antibiotic resistance membrane protein | SubName: Full=Putative antibiotic resistance membrane protein; | chromosome 1 | CDS | 2347021 | 1953 | + | 0.735279 |
| NA | BPSL3094 | putative outer membrane bacteriocin efflux protein | RecName: Full=Protein CyaE; | chromosome 1 | CDS | 3693290 | 1449 | + | 0.689441 |
| NA | BPSL1898 | family A24A unassigned peptidase | SubName: Full=Family A24A unassigned peptidase; | chromosome 1 | CDS | 2259910 | 501 | - | 0.666667 |
| NA | BPSL1660 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; | chromosome 1 | CDS | 1923238 | 1800 | + | 0.640556 |
| NA | BPSL1913 | putative exported protein | SubName: Full=Putative exported protein; | chromosome 1 | CDS | 2279266 | 1497 | + | 0.702071 |
| NA | BPSL1628 | putative fimbrial usher protein | SubName: Full=Putative fimbrial usher protein; | chromosome 1 | CDS | 1885085 | 2553 | + | 0.667842 |
| NA | BPSL2448 | family S49 unassigned peptidase | SubName: Full=Family S49 unassigned peptidase; | chromosome 1 | CDS | 2951945 | 1002 | - | 0.681637 |
| NA | BPSL2756 | putative exported protein | SubName: Full=Putative exported protein; | chromosome 1 | CDS | 3295677 | 561 | - | 0.723708 |
| NA | BPSL1897 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 2259446 | 468 | - | 0.673077 |
| NA | BPSL3262 | putative plasmid conjugal transfer protein | SubName: Full=Putative plasmid conjugal transfer protein; | chromosome 1 | CDS | 3877520 | 1431 | - | 0.589797 |
| NA | BPSL0019 | outer membrane efflux lipoprotein | SubName: Full=Outer membrane efflux lipoprotein; | chromosome 1 | CDS | 20480 | 1656 | - | 0.74215 |
| NA | BPSL1818 | putative fimbriae assembly-related protein | SubName: Full=Putative fimbriae assembly-related protein; | chromosome 1 | CDS | 2165512 | 1320 | - | 0.70303 |
| NA | BPSL1007 | putative fimbriae usher protein | SubName: Full=Putative fimbriae usher protein; | chromosome 1 | CDS | 1171461 | 2301 | - | 0.717949 |
| NA | BPSL1802 | multidrug efflux system putative membrane lipoprotein | SubName: Full=Multidrug efflux system putative membrane lipoprotein; | chromosome 1 | CDS | 2146271 | 1551 | - | 0.74597 |
| NA | BPSL1627 | putative fimbrial assembly chaperone precursor | SubName: Full=Putative fimbrial assembly chaperone; | chromosome 1 | CDS | 1884308 | 771 | + | 0.645914 |
| NA | BPSL1800 | putative outer membrane usher protein precursor | SubName: Full=Putative outer membrane usher protein; | chromosome 1 | CDS | 2141243 | 2469 | - | 0.697448 |
| NA | BPSL2063 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 2467978 | 3273 | - | 0.695692 |
| NA | BPSL2028 | putative fimbriae-assembly chaperone | SubName: Full=Putative fimbriae-assembly chaperone; | chromosome 1 | CDS | 2423980 | 840 | - | 0.721429 |
| NA | BPSL1895 | putative exported fimbriae assembly protein | SubName: Full=Putative exported fimbriae assembly protein; | chromosome 1 | CDS | 2257078 | 1326 | - | 0.698341 |
| NA | BPSL2940 | putative transport-related membrane protein | SubName: Full=Putative transport-related membrane protein; | chromosome 1 | CDS | 3511619 | 708 | - | 0.741525 |
| NA | BPSL1811 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 2158781 | 429 | - | 0.67366 |
| NA | BPSL1813 | putative fimbriae-related membrane protein | SubName: Full=Putative fimbriae-related membrane protein; | chromosome 1 | CDS | 2160315 | 945 | - | 0.725926 |
| NA | BPSL2997 | MarC family integral membrane protein | SubName: Full=MarC family integral membrane protein; | chromosome 1 | CDS | 3573296 | 603 | - | 0.66335 |
| NA | BPSL1629 | putative exported fimbria-related protein | SubName: Full=Putative exported fimbria-related protein; | chromosome 1 | CDS | 1887634 | 966 | + | 0.660455 |
| NA | BPSL1814 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 2161256 | 996 | - | 0.73494 |
| NA | BPSL3347 | putative bacteriophage-related lipoprotein | SubName: Full=Putative bacteriophage-related lipoprotein; | chromosome 1 | CDS | 3969661 | 1377 | - | 0.610748 |
| NA | BPSL0106 | putative exported protein | SubName: Full=Putative exported protein; | chromosome 1 | CDS | 117179 | 570 | - | 0.664912 |
| NA | BPSL0267 | putative flagella synthesis protein | SubName: Full=Putative flagella synthesis protein; | chromosome 1 | CDS | 279820 | 441 | - | 0.689342 |
| NA | BPSL1819 | putative fimbriae-assembly related protein | SubName: Full=Putative fimbriae-assembly related protein; | chromosome 1 | CDS | 2166995 | 1053 | - | 0.773029 |
| NA | BPSL1801 | putative type-1 fimbrial protein | SubName: Full=Putative type-1 fimbrial protein; | chromosome 1 | CDS | 2143834 | 513 | - | 0.672515 |
| NA | BPSL2870 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 3435044 | 327 | + | 0.608563 |
| NA | BPSL3008 | putative type IV pilus assembly protein | SubName: Full=Putative type IV pilus assembly protein; | chromosome 1 | CDS | 3584982 | 1260 | + | 0.719841 |
| NA | BPSL1893 | putative type II/IV secretion system ATP-binding protein | SubName: Full=Putative type II/IV secretion system ATP-binding protein; | chromosome 1 | CDS | 2254426 | 1344 | - | 0.676339 |
| NA | BPSL0268 | putative negative regulator of flagellin synthesis | SubName: Full=Putative negative regulator of flagellin synthesis; | chromosome 1 | CDS | 280340 | 345 | - | 0.715942 |
| NA | BPSL1799 | putative fimbrial chaperone | SubName: Full=Putative fimbrial chaperone; | chromosome 1 | CDS | 2140378 | 750 | - | 0.705333 |
| NA | BPSL1894 | putative fimbriae assembly protein | SubName: Full=Putative fimbriae assembly protein; | chromosome 1 | CDS | 2255773 | 1239 | - | 0.724778 |
| NA | BPSL3136 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 3737300 | 621 | - | 0.644122 |
| NA | BPSL1896 | putative membrane fimbriae assembly protein | SubName: Full=Putative membrane fimbriae assembly protein; | chromosome 1 | CDS | 2258467 | 900 | - | 0.743333 |
| NA | BPSL0782 | putative type 4 fimbrial pilin protein | SubName: Full=Putative type 4 fimbrial pilin protein; | chromosome 1 | CDS | 909649 | 519 | + | 0.72447 |
| NA | BPSL2939 | putative transport-related membrane protein | SubName: Full=Putative transport-related membrane protein; | chromosome 1 | CDS | 3511066 | 513 | - | 0.736842 |
| NA | BPSL1233 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome 1 | CDS | 1416651 | 1263 | + | 0.692003 |
| NA | BPSL1890 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome 1 | CDS | 2251432 | 966 | - | 0.738095 |
| NA | BPSL1566 | putative outer membrane lipoprotein | SubName: Full=Putative outer membrane lipoprotein; | chromosome 1 | CDS | 1817818 | 1905 | - | 0.745407 |
| NA | BPSL1903 | putative exported heme utilisation related protein | SubName: Full=Putative exported heme utilisation related protein; | chromosome 1 | CDS | 2264383 | 1680 | + | 0.6625 |
| NA | BPSL3263 | putative plasmid conjugal transfer protein | SubName: Full=Putative plasmid conjugal transfer protein; | chromosome 1 | CDS | 3879171 | 780 | - | 0.584615 |
| NA | BPSL1891 | putative outer-membrane protein | SubName: Full=Putative outer-membrane protein; | chromosome 1 | CDS | 2252404 | 1026 | - | 0.732943 |
| NA | BPSL0120 | SMF family protein | SubName: Full=SMF family protein; | chromosome 1 | CDS | 135094 | 1191 | - | 0.745592 |
| NA | BPSL3170 | putative secretion system protein | SubName: Full=Putative secretion system protein; | chromosome 1 | CDS | 3774618 | 1329 | - | 0.699774 |
| NA | BPSL1008 | putative exported fimbriae-related chaperone | SubName: Full=Putative exported fimbriae-related chaperone; | chromosome 1 | CDS | 1174516 | 711 | - | 0.731364 |
| NA | BPSL2022 | putative drug-resistance related outer-membrane protein | SubName: Full=Putative drug-resistance related outer-membrane protein; | chromosome 1 | CDS | 2415534 | 1581 | + | 0.746996 |
| NA | BPSL0514 | putative cell division protein | RecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; | chromosome 1 | CDS | 568161 | 1320 | - | 0.708333 |
| NA | BPSL1626 | putative fimbrial subunit type 1 precursor | SubName: Full=Putative fimbrial subunit type 1; | chromosome 1 | CDS | 1883679 | 531 | + | 0.636535 |
| NA | BPSL1705 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome 1 | CDS | 1982643 | 4821 | + | 0.633686 |
| NA | BPSL2027 | putative fimbriae-related protein | SubName: Full=Putative fimbriae-related protein; | chromosome 1 | CDS | 2421524 | 2349 | - | 0.710089 |
| NA | BPSL2752 | putative fimbrial protein precursor | SubName: Full=Putative fimbrial protein; | chromosome 1 | CDS | 3293420 | 453 | - | 0.675497 |
| clpP | BPSL1403 | ATP-dependent Clp protease proteolytic subunit | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome 1 | CDS | 1631727 | 654 | + | 0.639144 |
| ffh | BPSL2995 | signal recognition particle protein | RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; | chromosome 1 | CDS | 3571089 | 1368 | + | 0.668129 |
| flhA | BPSL3294 | flagellar biosynthesis protein FlhA | SubName: Full=Flagellar biosynthesis protein FlhA; | chromosome 1 | CDS | 3911356 | 2103 | - | 0.670471 |
| flhB | BPSL3295 | flagellar biosynthetic protein FlhB | SubName: Full=Flagellar biosynthetic protein FlhB; | chromosome 1 | CDS | 3913455 | 1218 | - | 0.690476 |
| fliE | BPSL0231 | flagellar hook-basal body complex protein | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome 1 | CDS | 242591 | 342 | + | 0.652047 |
| fliF | BPSL0230 | flagellar M-ring protein | RecName: Full=Flagellar M-ring protein; | chromosome 1 | CDS | 240547 | 1797 | - | 0.698386 |
| fliH | BPSL0228 | flagellar assembly protein | SubName: Full=Flagellar assembly protein; | chromosome 1 | CDS | 238889 | 681 | - | 0.737151 |
| fliI | BPSL0227 | flagellum-specific ATP synthase | SubName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; | chromosome 1 | CDS | 237324 | 1572 | - | 0.725827 |
| fliJ | BPSL0226 | flagellar fliJ protein | SubName: Full=Flagellar fliJ protein; | chromosome 1 | CDS | 236866 | 453 | - | 0.719647 |
| fliN | BPSL0028 | probable flagellar motor switch protein | SubName: Full=Probable flagellar motor switch protein; | chromosome 1 | CDS | 29761 | 498 | + | 0.680723 |
| fliP | BPSL0030 | flagellar biosynthetic protein | SubName: Full=Flagellar biosynthetic protein; | chromosome 1 | CDS | 30991 | 762 | + | 0.660105 |
| fliQ | BPSL0031 | flagellar biosynthetic protein | SubName: Full=Flagellar biosynthetic protein; | chromosome 1 | CDS | 31778 | 273 | + | 0.677656 |
| fliR | BPSL0032 | flagellar biosynthetic protein | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome 1 | CDS | 32169 | 783 | + | 0.676884 |
| fliS | BPSL0232 | flagellar protein | SubName: Full=Flagellar protein; | chromosome 1 | CDS | 243065 | 435 | + | 0.666667 |
| gspD | BPSL0007 | general secretory pathway protein D | SubName: Full=General secretory pathway protein D; | chromosome 1 | CDS | 8395 | 2274 | + | 0.667986 |
| gspE | BPSL0008 | general secretory pathway protein E | SubName: Full=General secretory pathway protein E; | chromosome 1 | CDS | 10665 | 1494 | + | 0.696118 |
| gspF | BPSL0009 | general secretory pathway protein F | SubName: Full=General secretory pathway protein F; | chromosome 1 | CDS | 12163 | 1218 | + | 0.688834 |
| gspG | BPSL0011 | general secretory pathway protein G | SubName: Full=General secretory pathway protein G; | chromosome 1 | CDS | 14010 | 453 | + | 0.624724 |
| gspH | BPSL0012 | general secretory pathway protein H | SubName: Full=General secretory pathway protein H; | chromosome 1 | CDS | 14617 | 480 | + | 0.727083 |
| gspI | BPSL0013 | general secretory pathway protein I | SubName: Full=General secretory pathway protein I; | chromosome 1 | CDS | 15099 | 405 | + | 0.720988 |
| gspJ | BPSL0014 | general secretory pathway protein J | SubName: Full=General secretory pathway protein J; | chromosome 1 | CDS | 15481 | 729 | + | 0.720165 |
| gspK | BPSL0015 | general secretory pathway protein K | RecName: Full=Type II secretion system protein K; | chromosome 1 | CDS | 16391 | 1071 | + | 0.693744 |
| gspL | BPSL0016 | general secretory pathway protein L | SubName: Full=General secretory pathway protein L; | chromosome 1 | CDS | 17486 | 1431 | + | 0.733054 |
| gspM | BPSL0017 | general secretory pathway protein M | SubName: Full=General secretory pathway protein M; | chromosome 1 | CDS | 18913 | 507 | + | 0.710059 |
| gspO | BPSL3010 | type IV prepilin leader peptide type M1 | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; Includes: RecName: Full=Leader peptidase; EC=3.4.23.43; AltName: Full=Prepilin peptidase; Includes: RecName: Full=N-methyltransferase; EC=2.1.1.-; | chromosome 1 | CDS | 3587485 | 930 | + | 0.705376 |
| lepB | BPSL2430 | signal peptidase I | RecName: Full=Signal peptidase I; EC=3.4.21.89; | chromosome 1 | CDS | 2935919 | 894 | - | 0.619687 |
| lspA | BPSL0905 | signal peptidase II | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; | chromosome 1 | CDS | 1055825 | 501 | - | 0.662675 |
| oprB | BPSL0816 | outer membrane efflux protein | SubName: Full=Outer membrane efflux protein; | chromosome 1 | CDS | 947371 | 1545 | + | 0.713269 |
| pilC | BPSL3009 | type IV pilus assembly protein PilC | SubName: Full=Type IV pilus assembly protein PilC; | chromosome 1 | CDS | 3586238 | 1218 | + | 0.724138 |
| secA | BPSL3016 | preprotein translocase SecA subunit | RecName: Full=Protein translocase subunit SecA; | chromosome 1 | CDS | 3593040 | 2796 | - | 0.654149 |
| secB | BPSL0446 | protein-export protein | RecName: Full=Protein-export protein SecB; | chromosome 1 | CDS | 485609 | 480 | + | 0.627083 |
| secD | BPSL2871 | putative protein-export membrane protein | RecName: Full=Protein translocase subunit SecD; | chromosome 1 | CDS | 3435478 | 2025 | + | 0.686914 |
| secE | BPSL3227 | preprotein translocase SecE subunit | RecName: Full=Protein translocase subunit SecE; | chromosome 1 | CDS | 3827986 | 381 | - | 0.553806 |
| secF | BPSL2872 | putative protein-export membrane protein | RecName: Full=Protein-export membrane protein SecF; | chromosome 1 | CDS | 3437518 | 951 | + | 0.634069 |
| secG | BPSL1210 | general secretory pathway, protein-export membrane protein | SubName: Full=General secretory pathway, protein-export membrane protein; | chromosome 1 | CDS | 1396065 | 378 | + | 0.674603 |
| secY | BPSL3193 | preprotein translocase SecY subunit | RecName: Full=Protein translocase subunit SecY; | chromosome 1 | CDS | 3798254 | 1365 | - | 0.608059 |
| tatA | BPSL3128 | Sec-independent protein translocase protein TatA | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome 1 | CDS | 3732947 | 234 | - | 0.615385 |
| tatB | BPSL3127 | Sec-independent protein translocase protein TatB | RecName: Full=Sec-independent protein translocase protein TatB; | chromosome 1 | CDS | 3732393 | 528 | - | 0.714015 |
| tatC | BPSL3126 | Sec-independent protein translocase protein TatC | RecName: Full=Sec-independent protein translocase protein TatC; | chromosome 1 | CDS | 3731572 | 783 | - | 0.634738 |
| tolB | BPSL2764 | putative periplasmic TolB protein | RecName: Full=Protein TolB; Flags: Precursor; | chromosome 1 | CDS | 3302378 | 1302 | + | 0.650538 |
| tolQ | BPSL2761 | putative TolQ transport transmembrane protein | SubName: Full=Putative TolQ transport transmembrane protein; | chromosome 1 | CDS | 3300011 | 789 | + | 0.648923 |
| tolR | BPSL2762 | putative TolR-related protein | SubName: Full=Putative TolR-related protein; | chromosome 1 | CDS | 3300810 | 450 | + | 0.66 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|