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2024-05-28 22:44:02

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome I

Number of genes found: 98

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Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VV0003 inner membrane protein, 60 kDaRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome I CDS2314 1620 - 0.488889
VV0109 multiple antibiotic transporterSubName: Full=Multiple antibiotic transporter; chromosome I CDS118370 717 + 0.470014
VV0112 signal recognition particle GTPaseRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome I CDS120110 1314 + 0.499239
VV0180 Sec-independent protein secretion pathway componentRecName: Full=Sec-independent protein translocase protein TatA; chromosome I CDS191508 237 + 0.43038
VV0181 Sec-independent protein secretion pathway componentRecName: Full=Sec-independent protein translocase protein TatB; chromosome I CDS191748 393 + 0.478372
VV0182 Sec-independent protein secretion pathway component TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome I CDS192207 750 + 0.454667
VV0213 type II secretory pathway, component EpsCSubName: Full=Type II secretory pathway, component EpsC; chromosome I CDS224220 930 + 0.505376
VV0214 type II secretory pathway, component EpsDSubName: Full=Type II secretory pathway, component EpsD; chromosome I CDS225186 2019 + 0.483903
VV0215 type II secretory pathway, ATPase EpsESubName: Full=Type II secretory pathway, ATPase EpsE; chromosome I CDS227204 1500 + 0.517333
VV0216 type II secretory pathway, component EpsFSubName: Full=Type II secretory pathway, component EpsF; chromosome I CDS228703 1218 + 0.506568
VV0217 type II secretory pathway, pseudopilin EpsGSubName: Full=Type II secretory pathway, pseudopilin EpsG; chromosome I CDS229935 483 + 0.486542
VV0218 type II secretory pathway, pseudopilin EpsHSubName: Full=Type II secretory pathway, pseudopilin EpsH; chromosome I CDS230344 705 + 0.507801
VV0219 type II secretory pathway, pseudopilin EpsISubName: Full=Type II secretory pathway, pseudopilin EpsI; chromosome I CDS230969 435 + 0.531034
VV0220 type II secretory pathway, component EpsJSubName: Full=Type II secretory pathway, component EpsJ; chromosome I CDS231390 702 + 0.517094
VV0221 type II secretory pathway, component EpsKRecName: Full=Type II secretion system protein K; chromosome I CDS232066 1041 + 0.505283
VV0222 type II secretory pathway, component EpsLRecName: Full=Type II secretion system protein L; Short=T2SS protein L; chromosome I CDS233075 1200 + 0.5325
VV0223 type II secretory pathway, component EpsMRecName: Full=Type II secretion system protein M; Short=T2SS protein M; AltName: Full=General secretion pathway protein M; chromosome I CDS234282 492 + 0.5
VV0246 tonB system transport protein ExbD2SubName: Full=TonB system transport protein ExbD2; chromosome I CDS255560 408 - 0.507353
VV0247 tonB system transport protein ExbB2SubName: Full=TonB system transport protein ExbB2; chromosome I CDS256049 528 - 0.503788
VV0248 putative TolR proteinSubName: Full=Putative TolR protein; chromosome I CDS256586 1362 - 0.50514
VV0395 preprotein translocase subunit SecYRecName: Full=Protein translocase subunit SecY; chromosome I CDS393234 1335 + 0.446442
VV0572 putative general secretion pathway protein ASubName: Full=Putative general secretion pathway protein A; chromosome I CDS553092 2157 + 0.506722
VV0583 outer membrane proteinSubName: Full=Outer membrane protein; chromosome I CDS566628 1326 - 0.466817
VV0621 preprotein translocase subunit SecARecName: Full=Protein translocase subunit SecA; chromosome I CDS607369 2724 + 0.462555
VV0688 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome I CDS688143 507 + 0.463511
VV0747 preprotein translocase, YajC subunitSubName: Full=Preprotein translocase, YajC subunit; chromosome I CDS754189 330 + 0.427273
VV0748 preprotein translocase subunit SecDRecName: Full=Protein translocase subunit SecD; chromosome I CDS754540 1857 + 0.473883
VV0749 preprotein translocase subunit SecFRecName: Full=Protein-export membrane protein SecF; chromosome I CDS756411 948 + 0.473629
VV0835 type IV pilus (Tfp) assembly protein PilESubName: Full=Type IV pilus (Tfp) assembly protein PilE; chromosome I CDS838564 444 - 0.425676
VV0836 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS839480 729 + 0.37037
VV0838 putative type IV pilinSubName: Full=Putative type IV pilin; chromosome I CDS841439 411 + 0.450122
VV0956 negative regulator FlgM of flagellin synthesisSubName: Full=Negative regulator FlgM of flagellin synthesis; chromosome I CDS955700 327 - 0.461774
VV0985 membrane proteinSubName: Full=Membrane protein; chromosome I CDS985222 459 - 0.455338
VV1104 ATP-dependent Clp protease, proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome I CDS1110495 627 + 0.449761
VV1152 protease IVRecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome I CDS1163206 1881 - 0.488038
VV1174 multiple antibiotic transporterSubName: Full=Multiple antibiotic transporter; chromosome I CDS1189729 708 - 0.473164
VV1298 periplasmic serine proteaseSubName: Full=Periplasmic serine protease; chromosome I CDS1319659 1062 + 0.43597
VV1491 type IV pilus (Tfp) assembly protein PilFSubName: Full=Type IV pilus (Tfp) assembly protein PilF; chromosome I CDS1525235 735 - 0.484354
VV1519 P pilus assembly protein, chaperone PapDSubName: Full=P pilus assembly protein, chaperone PapD; chromosome I CDS1554272 660 + 0.437879
VV1520 P pilus assembly protein, porin PapCSubName: Full=P pilus assembly protein, porin PapC; chromosome I CDS1554962 2403 + 0.502705
VV1545 outer membrane proteinSubName: Full=Outer membrane protein; chromosome I CDS1585717 1305 - 0.455172
VV1546 putative RTX proteinSubName: Full=Putative RTX protein; chromosome I CDS1587438 7098 + 0.457594
VV1602 outer membrane proteinSubName: Full=Outer membrane protein; chromosome I CDS1645612 1461 - 0.468857
VV2003 Flp pilus assembly protein TadDSubName: Full=Flp pilus assembly protein TadD; chromosome I CDS2002286 741 - 0.506073
VV2005 Flp pilus assembly protein TadCSubName: Full=Flp pilus assembly protein TadC; chromosome I CDS2003074 882 - 0.514739
VV2006 Flp pilus assembly protein TadBSubName: Full=Flp pilus assembly protein TadB; chromosome I CDS2003959 885 - 0.503955
VV2007 Flp pilus assembly protein TadASubName: Full=Flp pilus assembly protein TadA; chromosome I CDS2004853 1293 - 0.530549
VV2010 Flp pilus assembly protein, secretin CpaCSubName: Full=Flp pilus assembly protein, secretin CpaC; chromosome I CDS2007818 1389 - 0.510439
VV2011 Flp pilus assembly protein CpaBSubName: Full=Flp pilus assembly protein CpaB; chromosome I CDS2009209 840 - 0.489286
VV2156 type II secretory pathway, component ExeASubName: Full=Type II secretory pathway, component ExeA; chromosome I CDS2170563 1152 + 0.448785
VV2275 tol biopolymer transport system periplasmic component, TolBRecName: Full=Protein TolB; Flags: Precursor; chromosome I CDS2292089 1350 - 0.457778
VV2277 tol biopolymer transport system, TolR proteinSubName: Full=Tol biopolymer transport system, TolR protein; chromosome I CDS2294533 441 - 0.471655
VV2278 tol biopolymer transport system, TolQ proteinSubName: Full=Tol biopolymer transport system, TolQ protein; chromosome I CDS2294973 684 - 0.466374
VV2426 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2453025 5865 - 0.493947
VV2452 heme exporter protein DSubName: Full=Heme exporter protein D; chromosome I CDS2487587 207 - 0.449275
VV2467 flagellar biosynthesis pathway, component FlhASubName: Full=Flagellar biosynthesis pathway, component FlhA; chromosome I CDS2500964 2103 - 0.496434
VV2468 flagellar biosynthesis pathway, component FlhBSubName: Full=Flagellar biosynthesis pathway, component FlhB; chromosome I CDS2503227 1131 - 0.498674
VV2469 flagellar biosynthesis pathway, component FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome I CDS2504367 783 - 0.484036
VV2470 flagellar biosynthesis pathway, component FliQSubName: Full=Flagellar biosynthesis pathway, component FliQ; chromosome I CDS2505162 270 - 0.459259
VV2471 flagellar biosynthesis pathway, component FliPSubName: Full=Flagellar biosynthesis pathway, component FliP; chromosome I CDS2505447 870 - 0.493103
VV2473 polar flagellar switch protein FliNSubName: Full=Polar flagellar switch protein FliN; chromosome I CDS2506728 411 - 0.498783
VV2477 flagellar biosynthesis chaperone FliJSubName: Full=Flagellar biosynthesis chaperone FliJ; chromosome I CDS2510944 432 - 0.44213
VV2478 polar flagellum-specific ATP synthase FliISubName: Full=Polar flagellum-specific ATP synthase FliI; chromosome I CDS2511379 1326 - 0.526395
VV2479 polar flagellar assembly protein FliHSubName: Full=Polar flagellar assembly protein FliH; chromosome I CDS2512701 801 - 0.483146
VV2481 polar flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome I CDS2514646 1746 - 0.483963
VV2482 flagellar hook-basal body protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome I CDS2516407 369 - 0.452575
VV2487 flagellin-specific chaperone FlaJSubName: Full=Flagellin-specific chaperone FlaJ; chromosome I CDS2521142 411 - 0.476886
VV2651 Flp pilus assembly protein TadCSubName: Full=Flp pilus assembly protein TadC; chromosome I CDS2687124 990 - 0.484848
VV2652 Flp pilus assembly protein TadBSubName: Full=Flp pilus assembly protein TadB; chromosome I CDS2688070 966 - 0.481366
VV2653 Flp pilus assembly protein TadASubName: Full=Flp pilus assembly protein TadA; chromosome I CDS2689048 1488 - 0.508065
VV2654 Flp pilus assembly protein, ATPase CpaESubName: Full=Flp pilus assembly protein, ATPase CpaE; chromosome I CDS2690571 1251 - 0.46283
VV2660 Flp pilus assembly protein, secretin CpaCSubName: Full=Flp pilus assembly protein, secretin CpaC; chromosome I CDS2694260 1467 - 0.496251
VV2661 Flp pilus assembly protein CpaBSubName: Full=Flp pilus assembly protein CpaB; chromosome I CDS2695737 747 - 0.480589
VV2664 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2698407 168 - 0.428571
VV2711 preprotein translocase subunit SecGSubName: Full=Preprotein translocase subunit SecG; chromosome I CDS2751400 333 - 0.447447
VV2778 type IV pilin PilASubName: Full=Type IV pilin PilA; chromosome I CDS2833606 483 + 0.393375
VV2779 type IV pilus (Tfp) assembly protein PilBSubName: Full=Type IV pilus (Tfp) assembly protein PilB; chromosome I CDS2834105 1689 + 0.487271
VV2780 type IV pilus (Tfp) assembly protein PilCSubName: Full=Type IV pilus (Tfp) assembly protein PilC; chromosome I CDS2835841 1227 + 0.459658
VV2781 type IV prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome I CDS2837110 921 + 0.478827
VV2789 signal recognition particle GTPaseRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome I CDS2842195 1431 - 0.475192
VV2832 signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome I CDS2891917 900 - 0.482222
VV2872 type IV pilus (Tfp) assembly protein, ATPase component PilUSubName: Full=Type IV pilus (Tfp) assembly protein, ATPase component PilU; chromosome I CDS2925939 1113 - 0.490566
VV2874 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome I CDS2927064 1122 - 0.466132
VV2937 MSHA biogenesis protein MshOSubName: Full=MSHA biogenesis protein MshO; chromosome I CDS3004442 705 - 0.432624
VV2943 MSHA biogenesis protein MshGSubName: Full=MSHA biogenesis protein MshG; chromosome I CDS3007884 1221 - 0.493039
VV2944 MSHA biogenesis protein MshESubName: Full=MSHA biogenesis protein MshE; chromosome I CDS3009114 1725 - 0.50029
VV2946 MSHA biogenesis protein MshMSubName: Full=MSHA biogenesis protein MshM; chromosome I CDS3011953 849 - 0.473498
VV2947 MSHA biogenesis protein MshLSubName: Full=MSHA biogenesis protein MshL; chromosome I CDS3012809 1644 - 0.48236
VV2990 type IV pilus (Tfp) assembly protein PilQSubName: Full=Type IV pilus (Tfp) assembly protein PilQ; chromosome I CDS3065698 1785 - 0.462185
VV2991 type IV pilus (Tfp) assembly protein PilPSubName: Full=Type IV pilus (Tfp) assembly protein PilP; chromosome I CDS3067496 513 - 0.487329
VV2992 type IV pilus (Tfp) assembly protein PilOSubName: Full=Type IV pilus (Tfp) assembly protein PilO; chromosome I CDS3067998 693 - 0.468975
VV2993 type IV pilus (Tfp) assembly protein PilNSubName: Full=Type IV pilus (Tfp) assembly protein PilN; chromosome I CDS3068581 621 - 0.483092
VV2994 type IV pilus (Tfp) assembly protein, ATPase PilMSubName: Full=Type IV pilus (Tfp) assembly protein, ATPase PilM; chromosome I CDS3069161 1008 - 0.468254
VV3085 preprotein translocase subunit SecBRecName: Full=Protein-export protein SecB; chromosome I CDS3169755 468 + 0.463675
VV3112 putative periplasmic protein CpxPSubName: Full=Putative periplasmic protein CpxP; chromosome I CDS3192769 534 - 0.483146
VV3122 multiple antibiotic transporterSubName: Full=Multiple antibiotic transporter; chromosome I CDS3203579 624 + 0.503205
VV3165 preprotein translocase subunit SecERecName: Full=Protein translocase subunit SecE; chromosome I CDS3249268 381 - 0.451444
VV3223 Smf proteinSubName: Full=Smf protein; chromosome I CDS3313130 1104 - 0.506341