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2024-05-29 02:33:15

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome 2

Number of genes found: 46

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VPA0088 oligogalacturonate lyaseSubName: Full=Oligogalacturonate lyase; chromosome 2 CDS81003 1167 + 0.461868
VPA0152 biopolymer transport protein ExbB-related proteinSubName: Full=Biopolymer transport protein ExbB-related protein; chromosome 2 CDS148366 1368 + 0.482456
VPA0153 TonB system transport protein ExbB2SubName: Full=TonB system transport protein ExbB2; chromosome 2 CDS149733 555 + 0.479279
VPA0154 TonB system transport protein ExbD2SubName: Full=TonB system transport protein ExbD2; chromosome 2 CDS150284 405 + 0.469136
VPA0225 putative efflux pump channel proteinSubName: Full=Putative efflux pump channel protein; chromosome 2 CDS228168 1389 + 0.480202
VPA0262 LfgMSubName: Full=LfgM; chromosome 2 CDS264553 282 - 0.446809
VPA0362 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome 2 CDS355443 1503 - 0.499667
VPA0424 TonB system transport protein ExbD1SubName: Full=TonB system transport protein ExbD1; chromosome 2 CDS416947 414 - 0.442029
VPA0425 ExbB-like proteinSubName: Full=ExbB-like protein; chromosome 2 CDS417357 693 - 0.502164
VPA0482 putative outer membrane cation efflux proteinSubName: Full=Putative outer membrane cation efflux protein; chromosome 2 CDS485440 1380 - 0.481884
VPA0655 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS657915 1044 + 0.483716
VPA0668 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS668887 18255 + 0.471816
VPA0718 putative membrane proteinSubName: Full=Putative membrane protein; chromosome 2 CDS750211 444 - 0.342342
VPA0719 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS750819 285 + 0.385965
VPA0721 rough colony protein RcpASubName: Full=Rough colony protein RcpA; chromosome 2 CDS751917 1344 + 0.447173
VPA0724 TadASubName: Full=TadA; chromosome 2 CDS754909 1266 + 0.457346
VPA0725 putative TadBSubName: Full=Putative TadB; chromosome 2 CDS756216 870 + 0.425287
VPA0726 putative TadCSubName: Full=Putative TadC; chromosome 2 CDS757085 867 + 0.399077
VPA0954 agglutination proteinSubName: Full=Agglutination protein; chromosome 2 CDS995564 1314 + 0.428463
VPA0993 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1043734 2697 - 0.460512
VPA1208 putative protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome 2 CDS1281621 903 - 0.458472
VPA1209 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome 2 CDS1282526 1836 - 0.46024
VPA1335 putative type III secretion apparatus proteinSubName: Full=Putative type III secretion apparatus protein; chromosome 2 CDS1408775 234 - 0.376068
VPA1338 putative ATPase YscNSubName: Full=Putative ATPase YscN; chromosome 2 CDS1410089 1263 - 0.416469
VPA1339 putative type III secretion system EscC proteinSubName: Full=Putative type III secretion system EscC protein; chromosome 2 CDS1411351 1464 - 0.406421
VPA1342 putative Type III secretion protein Spa24SubName: Full=Putative Type III secretion protein Spa24; chromosome 2 CDS1413731 732 - 0.389344
VPA1349 putative Type III secretion protein Spa33SubName: Full=Putative Type III secretion protein Spa33; chromosome 2 CDS1419513 216 - 0.393519
VPA1354 putative type III secretion system EscU proteinSubName: Full=Putative type III secretion system EscU protein; chromosome 2 CDS1422554 1059 - 0.374882
VPA1355 putative type III secretion system EscV proteinSubName: Full=Putative type III secretion system EscV protein; chromosome 2 CDS1423630 1884 - 0.386412
VPA1357 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1426234 4869 - 0.535223
VPA1504 CsuDSubName: Full=CsuD; chromosome 2 CDS1608101 2409 - 0.474056
VPA1505 CsuCSubName: Full=CsuC; chromosome 2 CDS1610536 780 - 0.375641
VPA1532 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1634236 441 - 0.471655
VPA1533 putative flagellum-specific ATP synthaseSubName: Full=Putative flagellum-specific ATP synthase; chromosome 2 CDS1634692 1350 - 0.513333
VPA1534 putative flagellar assembly proteinSubName: Full=Putative flagellar assembly protein; chromosome 2 CDS1636034 756 - 0.494709
VPA1536 putative flagellar M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome 2 CDS1637775 1755 - 0.499715
VPA1537 putative flagellar hook-basal body complex proteinRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome 2 CDS1639533 357 - 0.47619
VPA1541 flagellar motor switch proteinSubName: Full=Flagellar motor switch protein; chromosome 2 CDS1643461 372 + 0.478495
VPA1542 putative flagellar assembly proteinSubName: Full=Putative flagellar assembly protein; chromosome 2 CDS1643851 759 + 0.479578
VPA1543 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome 2 CDS1644622 270 + 0.455556
VPA1544 putative flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome 2 CDS1644891 777 + 0.486486
VPA1545 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome 2 CDS1645664 1128 + 0.45922
VPA1546 flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome 2 CDS1646823 2091 + 0.477284
VPA1551 LafCSubName: Full=LafC; chromosome 2 CDS1652994 387 + 0.449612
VPA1579 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome 2 CDS1676409 1644 + 0.506083
VPA1600 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1698719 642 - 0.456386