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2024-06-17 18:21:27

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 92

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Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA MCA0632 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS668848 426 + 0.659624
NA MCA2154 putative outer membrane protein CyaESubName: Full=Putative outer membrane protein CyaE; chromosome CDS2320683 1362 - 0.657856
NA MCA1115 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome CDS1171467 1095 + 0.644749
NA MCA2930 putative prophage MuMc02, head decoration proteinSubName: Full=Putative prophage MuMc02, head decoration protein; chromosome CDS3117895 1401 - 0.643112
NA MCA1768 putative outer membrane heavy metal efflux proteinSubName: Full=Putative outer membrane heavy metal efflux protein; chromosome CDS1899170 1305 + 0.64751
NA MCA0631 MotA/TolQ/ExbB proton channel family domain proteinSubName: Full=MotA/TolQ/ExbB proton channel family domain protein; chromosome CDS668226 615 + 0.639024
NA MCA2841 putative DNA processing protein DprASubName: Full=Putative DNA processing protein DprA; chromosome CDS3032860 1095 - 0.679452
NA MCA1118 general secretory pathway protein ISubName: Full=General secretory pathway protein I; chromosome CDS1173554 420 + 0.685714
NA MCA1114 general secretion pathway protein ESubName: Full=General secretion pathway protein E; chromosome CDS1169534 1758 + 0.642776
NA MCA2226 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2405747 1632 + 0.629902
NA MCA1595 multidrug efflux system outer membrane subunitSubName: Full=Multidrug efflux system outer membrane subunit; chromosome CDS1699953 1563 + 0.664108
NA MCA1478 putative signal peptide peptidase SppASubName: Full=Putative signal peptide peptidase SppA; chromosome CDS1571117 984 - 0.630081
NA MCA1723 outer membrane efflux proteinRecName: Full=Protein CyaE; chromosome CDS1841631 1311 + 0.62624
NA MCA3037 inner membrane protein, 60 kDaRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS3221994 1638 + 0.613553
NA MCA2718 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2906568 1170 + 0.607692
NA MCA0436 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS447075 1212 + 0.697195
NA MCA2262 outer membrane heavy metal efflux proteinSubName: Full=Outer membrane heavy metal efflux protein; chromosome CDS2456492 1281 + 0.672912
NA MCA0089 pilin-like proteinSubName: Full=Pilin-like protein; chromosome CDS94123 1074 - 0.594972
NA MCA1277 putative outer membrane protein TolCSubName: Full=Putative outer membrane protein TolC; chromosome CDS1360555 1440 - 0.660417
NA MCA0061 general secretion pathway protein ASubName: Full=General secretion pathway protein A; chromosome CDS61739 1650 - 0.666061
NA MCA1937 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS2085540 1386 - 0.652237
NA MCA1120 general secretion pathway protein KRecName: Full=Type II secretion system protein K; chromosome CDS1174815 939 + 0.635783
NA MCA0091 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS95813 549 - 0.615665
NA MCA2816 outer membrane efflux family proteinSubName: Full=Outer membrane efflux family protein; chromosome CDS3008109 1449 + 0.6853
NA MCA1510 fimbrial proteinSubName: Full=Fimbrial protein; chromosome CDS1609935 417 - 0.563549
NA MCA1362 outer membrane efflux family proteinSubName: Full=Outer membrane efflux family protein; chromosome CDS1450622 1677 - 0.636852
NA MCA1117 general secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome CDS1173073 426 + 0.678404
NA MCA0304 fimbrial biogenesis proteinSubName: Full=Fimbrial biogenesis protein; chromosome CDS299534 2367 - 0.648923
NA MCA2227 hemagglutinin-related proteinSubName: Full=Hemagglutinin-related protein; chromosome CDS2407392 10050 + 0.673433
NA MCA2110 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS2269135 1314 + 0.584475
NA MCA2280 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2475594 384 - 0.627604
NA MCA2326 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2522120 369 - 0.607046
NA MCA0297 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS291249 813 - 0.626076
NA MCA0088 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS93547 549 - 0.679417
NA MCA2329 putative outer membrane efflux family proteinSubName: Full=Putative outer membrane efflux family protein; chromosome CDS2523781 1008 - 0.669643
NA MCA2888 putative type IV pilus biogenesis protein PilFSubName: Full=Putative type IV pilus biogenesis protein PilF; chromosome CDS3079145 768 + 0.667969
NA MCA0438 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS448809 414 + 0.666667
NA MCA0670 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS701779 411 + 0.664234
NA MCA0682 preprotein translocase YajC subunitSubName: Full=Preprotein translocase YajC subunit; chromosome CDS713276 357 + 0.621849
NA MCA0420 putative heme exporter protein CcmDSubName: Full=Putative heme exporter protein CcmD; chromosome CDS419538 213 - 0.511737
NA MCA0176 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS185617 1611 - 0.621353
NA MCA0442 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS453638 657 + 0.660578
NA MCA0087 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS90123 3399 - 0.641071
NA MCA0443 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS454307 411 + 0.656934
NA MCA0150 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS156890 870 + 0.666667
NA MCA0284 outer membrane efflux family proteinSubName: Full=Outer membrane efflux family protein; chromosome CDS269243 1557 - 0.638407
NA MCA2238 MotA/TolQ/ExbB proton channel family domain proteinSubName: Full=MotA/TolQ/ExbB proton channel family domain protein; chromosome CDS2429302 1824 - 0.620614
NA MCA2237 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS2428901 405 - 0.595062
NA MCA3111 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3301356 444 - 0.594595
NA MCA2176 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2349056 387 - 0.55814
NA MCA1724 MarC family integral membrane proteinSubName: Full=MarC family integral membrane protein; chromosome CDS1842959 585 - 0.588034
NA MCA1123 general secretion pathway protein DSubName: Full=General secretion pathway protein D; chromosome CDS1178358 2256 + 0.631206
NA MCA0305 putative chaperone protein pmfDSubName: Full=Putative chaperone protein pmfD; chromosome CDS301941 732 - 0.666667
NA MCA2149 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2312401 1557 - 0.634554
NA MCA1121 general secretion pathway protein LSubName: Full=General secretion pathway protein L; chromosome CDS1175785 1119 + 0.613941
NA MCA2061 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2216251 2460 - 0.669919
NA MCA2661 prophage LambdaMc01, peptidase, U7 familySubName: Full=Prophage LambdaMc01, peptidase, U7 family; chromosome CDS2842178 1227 + 0.693562
NA MCA2232 outer membrane efflux family proteinSubName: Full=Outer membrane efflux family protein; chromosome CDS2423503 1428 + 0.489496
NA MCA1116 general secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome CDS1172598 432 + 0.611111
NA MCA0090 putative type IV fimbrial biogenesis protein PilVSubName: Full=Putative type IV fimbrial biogenesis protein PilV; chromosome CDS95226 591 - 0.658206
NA MCA0669 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS701110 657 + 0.663622
clpP-1 MCA0242 ATP-dependent Clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 1; chromosome CDS238108 621 + 0.62963
clpP-2 MCA0529 ATP-dependent Clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit 2; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 2; chromosome CDS543746 588 + 0.62415
exbB2 MCA0437 MotA/TolQ/ExbB proton channel family domain proteinSubName: Full=MotA/TolQ/ExbB proton channel family domain protein; chromosome CDS448294 498 + 0.690763
ffh MCA1338 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS1422638 1359 + 0.627667
lepB MCA1465 signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS1555363 789 - 0.588086
lspA MCA2254 signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS2444870 477 + 0.63522
pilB MCA2096 type IV pilus assembly protein PilBSubName: Full=Type IV pilus assembly protein PilB; chromosome CDS2252675 1716 - 0.620629
pilC MCA2095 type IV pilin biogenesis protein PilCSubName: Full=Type IV pilin biogenesis protein PilC; chromosome CDS2251456 1215 - 0.625514
pilD MCA2094 leader peptidase PilDRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS2250563 870 - 0.645977
pilE MCA0086 type 4 fimbrial biogenesis protein PilESubName: Full=Type 4 fimbrial biogenesis protein PilE; chromosome CDS89664 453 - 0.633554
pilM MCA0325 type 4 fimbrial biogenesis protein PilMSubName: Full=Type 4 fimbrial biogenesis protein PilM; chromosome CDS320584 1143 + 0.617673
pilN MCA0326 type 4 fimbrial biogenesis protein PilNSubName: Full=Type 4 fimbrial biogenesis protein PilN; chromosome CDS321696 636 + 0.633648
pilO MCA0327 type 4 fimbrial biogenesis protein PilOSubName: Full=Type 4 fimbrial biogenesis protein PilO; chromosome CDS322328 639 + 0.624413
pilP MCA0328 type 4 fimbrial biogenesis protein PilPSubName: Full=Type 4 fimbrial biogenesis protein PilP; chromosome CDS322966 543 + 0.604052
pilQ MCA0329 fimbrial assembly protein PilQSubName: Full=Fimbrial assembly protein PilQ; chromosome CDS323495 2190 + 0.622831
pilT MCA1537 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome CDS1638097 1035 + 0.614493
pilU MCA1538 twitching motility protein PilUSubName: Full=Twitching motility protein PilU; chromosome CDS1639147 1119 + 0.619303
pilZ MCA1994 type 4 fimbrial biogenesis protein PilZSubName: Full=Type 4 fimbrial biogenesis protein PilZ; chromosome CDS2144230 357 - 0.607843
secA MCA1680 preprotein translocase, SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS1791517 2529 - 0.616054
secB MCA2537 protein-export protein SecBRecName: Full=Protein-export protein SecB; chromosome CDS2712448 468 + 0.587607
secD MCA0683 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS713729 1818 + 0.633113
secE MCA1060 preprotein translocase, SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS1111143 375 + 0.576
secF MCA0684 protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS715558 930 + 0.625806
secG MCA0675 preprotein translocase, SecG subunitSubName: Full=Preprotein translocase, SecG subunit; chromosome CDS708641 354 + 0.632768
secY MCA2352 preprotein translocase, SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS2543088 1326 - 0.558824
tatA MCA1488 Sec-independent protein translocase protein TatARecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS1584058 213 - 0.591549
tatB MCA1487 Sec-independent protein translocase protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS1583736 315 - 0.650794
tatC MCA1486 Sec-independent protein translocase TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS1582949 765 - 0.598693
tolB MCA1229 tolB proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS1295268 1275 + 0.648627
tolQ MCA1226 tolQ proteinSubName: Full=TolQ protein; chromosome CDS1292731 678 + 0.625369
tolR MCA1227 tolR proteinSubName: Full=TolR protein; chromosome CDS1293405 441 + 0.632653