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2024-06-02 01:53:00

Gene list

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COG category: Signal transduction mechanisms
Genomic element: chromosome 1

Number of genes found: 16

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3384 hypothetical Methyl-accepting chemotaxis proteinSubName: Full=Hypothetical Methyl-accepting chemotaxis protein; chromosome 1 CDS340783 1617 + 0.471861
C3964 PBPRA3257 putative nitrogen regulatory IIA protein PtsNSubName: Full=Putative nitrogen regulatory IIA protein PtsN; chromosome 1 CDS205738 432 + 0.407407
CSRA PBPRA3065 putative carbon storage regulatorRecName: Full=Carbon storage regulator homolog; chromosome 1 CDS16395 198 - 0.40404
S2901 PBPRA3045 putative autoinducer-2 production protein LuxSRecName: Full=S-ribosylhomocysteine lyase; EC=4.4.1.21; AltName: Full=AI-2 synthesis protein; AltName: Full=Autoinducer-2 production protein LuxS; chromosome 1 CDS3947 528 - 0.405303
SF2634 PBPRA3094 putative sigma-E factor negative regulatory protein RseARecName: Full=Anti-sigma-E factor RseA; AltName: Full=Regulator of SigE; AltName: Full=Sigma-E anti-sigma factor RseA; AltName: Full=Sigma-E factor negative regulatory protein; chromosome 1 CDS50468 699 - 0.433476
SO0874 PBPRA3171 putative DnaK suppressor proteinRecName: Full=RNA polymerase-binding transcription factor DksA; chromosome 1 CDS115494 450 + 0.453333
SO1586 PBPRA3314 putative cAMP-binding proteinsSubName: Full=Putative cAMP-binding proteins; chromosome 1 CDS279748 567 + 0.391534
SO1942 PBPRA3166 hypothetical HD-GYP hydrolase domain containing proteinSubName: Full=Hypothetical HD-GYP hydrolase domain containing protein; chromosome 1 CDS107406 1257 + 0.404932
STM2958 PBPRA3084 putative sensor histidine kinase/response regulatorSubName: Full=Putative sensor histidine kinase/response regulator; chromosome 1 CDS39790 2712 + 0.437316
T0272 PBPRA3093 putative sigma-E factor regulatory protein RseBSubName: Full=Putative sigma-E factor regulatory protein RseB; chromosome 1 CDS49473 996 - 0.451807
VCA0176 PBPRA3193 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome 1 CDS140389 1917 + 0.435576
VVA0366 PBPRA3375 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome 1 CDS330473 1884 + 0.457006
Y0203 PBPRA3287 putative MSHA biogenesis protein MshHSubName: Full=Putative MSHA biogenesis protein MshH; chromosome 1 CDS238899 1944 - 0.409465
Y0811 PBPRA3082 putative GTP pyrophosphokinaseSubName: Full=Putative GTP pyrophosphokinase; chromosome 1 CDS35924 2232 - 0.43414
Y1293 PBPRA3092 hypothetical proteinSubName: Full=Photobacterium sp. rpoE; SubName: Full=Photobacterium sp. rpoE, lepA and ORF 2, 3, 4 genes; SubName: Full=Uncharacterized protein; chromosome 1 CDS48979 498 - 0.475904
Z0174 PBPRA3188 putative sugar diacid utilization regulatorSubName: Full=Putative sugar diacid utilization regulator; chromosome 1 CDS131238 1158 + 0.42228