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2024-06-02 17:36:39

Gene list

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COG category: Signal transduction mechanisms
Genomic element: chromosome II

Number of genes found: 93

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VCA0008 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS6624 1662 - 0.483755
VCA0031 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS37648 1566 - 0.4553
VCA0034 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS42214 873 - 0.468499
VCA0049 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS56584 882 - 0.470522
VCA0052 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS59786 1563 - 0.498401
VCA0068 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS77459 1644 - 0.484793
VCA0074 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS82992 1101 - 0.451408
VCA0080 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS90558 1824 - 0.426535
VCA0101 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS108299 1557 - 0.445087
VCA0112 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS122069 1488 + 0.49664
VCA0117 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome II CDS128790 1593 + 0.510986
VCA0135 cyclic nucleotide binding protein, putativeSubName: Full=Cyclic nucleotide binding protein, putative; chromosome II CDS149379 681 + 0.500734
VCA0141 C4-dicarboxylate transport sensor protein, putativeSubName: Full=C4-dicarboxylate transport sensor protein, putative; chromosome II CDS155195 2055 - 0.509489
VCA0142 C4-dicarboxylate transport transcriptional regulatory proteinSubName: Full=C4-dicarboxylate transport transcriptional regulatory protein; chromosome II CDS157539 1353 + 0.542498
VCA0159 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS176056 942 - 0.464968
VCA0165 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS181879 2133 + 0.464135
VCA0176 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS192834 1935 + 0.486305
VCA0182 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome II CDS200338 1593 - 0.52103
VCA0189 response regulatorSubName: Full=Response regulator; chromosome II CDS205609 1005 + 0.468657
VCA0190 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS206613 447 + 0.436242
VCA0210 response regulator, putativeSubName: Full=Response regulator, putative; chromosome II CDS225591 1569 + 0.463352
VCA0211 sensory box sensor histidine kinaseSubName: Full=Sensory box sensor histidine kinase; chromosome II CDS227217 1947 - 0.465331
VCA0217 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS234164 1080 - 0.452778
VCA0220 hemolysin secretion protein HylBRecName: Full=Methyl-accepting chemotaxis protein HlyB; chromosome II CDS240114 1647 + 0.485732
VCA0238 sensor histidine kinaseSubName: Full=Sensor histidine kinase; chromosome II CDS258742 1650 + 0.482424
VCA0239 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome II CDS260372 675 + 0.484444
VCA0245 PTS system, IIA componentSubName: Full=PTS system, IIA component; chromosome II CDS264715 507 - 0.5286
VCA0256 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome II CDS276337 672 - 0.513393
VCA0257 sensor histidine kinaseSubName: Full=Sensor histidine kinase; chromosome II CDS276984 1455 - 0.535395
VCA0268 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS285034 1932 + 0.47412
VCA0366 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS353709 936 + 0.375
VCA0451 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS403167 501 + 0.331337
VCA0522 sensor histidine kinase/response regulator LuxNRecName: Full=CAI-1 autoinducer sensor kinase/phosphatase CqsS; EC=2.7.13.3; EC=3.1.3.-; AltName: Full=Cholerae quorum-sensing sensor; chromosome II CDS454734 2061 + 0.437166
VCA0531 sensor histidine kinaseSubName: Full=Sensor histidine kinase; chromosome II CDS468993 1494 + 0.490629
VCA0532 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome II CDS470476 693 + 0.471861
VCA0536 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS473172 867 - 0.467128
VCA0557 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS493351 1410 + 0.436879
VCA0560 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS497678 1239 - 0.447942
VCA0565 sensor histidine kinaseSubName: Full=Sensor histidine kinase; chromosome II CDS503254 1500 + 0.447333
VCA0566 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome II CDS504647 738 + 0.451219
VCA0583 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS521497 786 + 0.475827
VCA0658 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS594586 1611 - 0.50031
VCA0663 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS598557 1764 + 0.461451
VCA0675 nitrate/nitrite sensor protein NarQSubName: Full=Nitrate/nitrite sensor protein NarQ; chromosome II CDS609797 1752 - 0.476027
VCA0681 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS616344 1296 - 0.477623
VCA0682 transcriptional regulator UhpASubName: Full=Transcriptional regulator UhpA; chromosome II CDS617798 627 + 0.470494
VCA0683 sensor protein UhpBSubName: Full=Sensor protein UhpB; chromosome II CDS618427 1584 + 0.488005
VCA0697 sensory box/GGDEF family proteinSubName: Full=Sensory box/GGDEF family protein; chromosome II CDS635108 1929 + 0.452566
VCA0704 phosphoglycerate transport system transcriptional regulatory protein PgtASubName: Full=Phosphoglycerate transport system transcriptional regulatory protein PgtA; chromosome II CDS644568 1320 - 0.497727
VCA0705 phosphoglycerate transport regulatory protein PgtB, putativeSubName: Full=Phosphoglycerate transport regulatory protein PgtB, putative; chromosome II CDS645805 2370 - 0.487764
VCA0709 sensor protein TorSSubName: Full=Sensor protein TorS; chromosome II CDS652820 3063 - 0.508652
VCA0719 sensor histide kinaseSubName: Full=Sensor histide kinase; chromosome II CDS664193 948 - 0.486287
VCA0736 sensor histidine kinase LuxQRecName: Full=Autoinducer 2 sensor kinase/phosphatase LuxQ; EC=2.7.13.3; EC=3.1.3.-; chromosome II CDS680472 2574 - 0.471639
VCA0759 arginine ABC transporter, periplasmic arginine-binding proteinSubName: Full=Arginine ABC transporter, periplasmic arginine-binding protein; chromosome II CDS702954 732 - 0.483607
VCA0773 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS715286 1422 + 0.506329
VCA0785 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS728957 1884 + 0.491507
VCA0848 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS789918 981 - 0.449541
VCA0850 response regulatorRecName: Full=Uncharacterized response regulatory protein VC_A0850; chromosome II CDS801121 786 - 0.465649
VCA0851 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS802066 1080 - 0.466667
VCA0864 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS815881 1398 + 0.440629
VCA0895 chemotactic transducer-related proteinSubName: Full=Chemotactic transducer-related protein; chromosome II CDS846932 2946 + 0.478955
VCA0905 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS859667 1140 - 0.472807
VCA0906 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS860947 1737 - 0.464594
VCA0923 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS874442 1959 + 0.475242
VCA0931 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS884337 1383 - 0.477946
VCA0939 sensory box/GGDEF family proteinSubName: Full=Sensory box/GGDEF family protein; chromosome II CDS890253 966 + 0.454451
VCA0954 chemotaxis protein CheV, putativeSubName: Full=Chemotaxis protein CheV, putative; chromosome II CDS903131 921 + 0.465798
VCA0956 GGDEF family proteinRecName: Full=Diguanylate cyclase VdcA; Short=DGC; EC=2.7.7.65; chromosome II CDS904820 1020 + 0.455882
VCA0960 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS908482 1374 - 0.454876
VCA0965 GGDEF family proteinSubName: Full=GGDEF family protein; chromosome II CDS914406 1191 + 0.426532
VCA0974 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS919898 1686 - 0.488138
VCA0978 amino acid ABC transporter, periplasmic amino acid-binding protein, putativeSubName: Full=Amino acid ABC transporter, periplasmic amino acid-binding protein, putative; chromosome II CDS926671 732 - 0.443989
VCA0979 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS927422 885 - 0.474576
VCA0981 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS929101 744 - 0.458333
VCA0988 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS940679 1557 + 0.480411
VCA1034 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS984002 2001 - 0.501249
VCA1039 amino acid ABC transporter, periplasmic amino acid-binding proteinSubName: Full=Amino acid ABC transporter, periplasmic amino acid-binding protein; chromosome II CDS989435 837 + 0.501792
VCA1056 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS1005434 2313 - 0.479032
VCA1069 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS1018626 1920 - 0.510417
VCA1082 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1035375 1164 + 0.467354
VCA1083 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1036577 708 + 0.466102
VCA1086 response regulatorSubName: Full=Response regulator; chromosome II CDS1041477 1707 - 0.458699
VCA1087 anti-sigma F factor antagonist, putativeSubName: Full=Anti-sigma F factor antagonist, putative; chromosome II CDS1043207 300 - 0.42
VCA1088 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS1043516 1155 - 0.45368
VCA1090 chemotaxis protein CheD, putativeRecName: Full=Probable chemoreceptor glutamine deamidase CheD; EC=3.5.1.44; chromosome II CDS1045749 702 - 0.452991
VCA1091 chemotaxis protein methyltransferase CheRRecName: Full=Chemotaxis protein methyltransferase 3; EC=2.1.1.80; chromosome II CDS1046389 831 - 0.441637
VCA1092 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome II CDS1047234 2037 - 0.487972
VCA1093 purine-binding chemotaxis protein CheWSubName: Full=Purine-binding chemotaxis protein CheW; chromosome II CDS1049284 462 - 0.495671
VCA1094 purine-binding chemotaxis protein CheWSubName: Full=Purine-binding chemotaxis protein CheW; chromosome II CDS1049742 528 - 0.486742
VCA1095 chemotaxis protein CheASubName: Full=Chemotaxis protein CheA; chromosome II CDS1050278 2163 - 0.490522
VCA1096 chemotaxis protein CheYSubName: Full=Chemotaxis protein CheY; chromosome II CDS1052489 378 - 0.455026
VCA1097 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1052859 306 - 0.470588
VCA1105 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome II CDS1061510 657 - 0.488584