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2024-06-10 01:34:31

Gene list

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COG category: General function prediction only
Genomic element: chromosome 1

Number of genes found: 37

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3281 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS232518 1263 - 0.452098
NA PBPRA3098 hypothetical cell shape-determining proteinSubName: Full=Hypothetical cell shape-determining protein; chromosome 1 CDS54346 420 - 0.416667
NA PBPRA3074 putative acid phosphataseRecName: Full=5-nucleotidase SurE; EC=3.1.3.5; AltName: Full=Nucleoside 5-monophosphate phosphohydrolase; chromosome 1 CDS28154 774 - 0.450904
NA PBPRA3170 putative sugar fermentation stimulation proteinRecName: Full=Sugar fermentation stimulation protein homolog; chromosome 1 CDS114653 705 + 0.395745
NA PBPRA3114 conserved hypothetical proteinRecName: Full=UPF0251 protein PBPRA3114; chromosome 1 CDS66934 378 - 0.460317
NA PBPRA3110 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS64579 438 + 0.420091
NA PBPRA3333 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS299010 363 - 0.292011
C0117 PBPRA3207 hypothetical mutator MutT proteinSubName: Full=Hypothetical mutator MutT protein; chromosome 1 CDS157866 420 - 0.457143
HFQ PBPRA3350 putative host factor-IRecName: Full=RNA-binding protein Hfq; chromosome 1 CDS314528 258 - 0.426357
MOTX PBPRA3344 putative sodium-type flagellar protein MotXSubName: Full=Putative sodium-type flagellar protein MotX; chromosome 1 CDS308465 630 - 0.449206
PLU4016 PBPRA3238 hypothetical ATPaseSubName: Full=Hypothetical ATPase; chromosome 1 CDS189498 1104 - 0.424819
PLU4044 PBPRA3258 conserved hypothetical proteinRecName: Full=UPF0042 nucleotide-binding protein PBPRA3258; chromosome 1 CDS206206 849 + 0.419317
PLU4060 PBPRA3261 putative pmbA proteinSubName: Full=Putative pmbA protein; chromosome 1 CDS209032 1344 - 0.462798
S2801 PBPRA3088 putative GTP-binding protein EraRecName: Full=GTPase Era; chromosome 1 CDS44470 906 - 0.419426
SO3560 PBPRA3048 putative protease, insulinase familySubName: Full=Putative protease, insulinase family; chromosome 1 CDS7062 2847 - 0.429575
SO3905 PBPRA3323 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS288031 651 - 0.447005
SO3957 PBPRA3251 putative low specificity phosphataseSubName: Full=Putative low specificity phosphatase; chromosome 1 CDS201505 558 + 0.405018
STM3267 PBPRA3230 hypothetical hemolysinSubName: Full=Hypothetical hemolysin; chromosome 1 CDS183607 540 + 0.444444
STM4362 PBPRA3349 putative GTP-binding protein HflXRecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX; chromosome 1 CDS313209 1290 - 0.451938
STY2865 PBPRA3043 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1717 777 + 0.393822
STY2951 PBPRA3069 putative CinA-related proteinSubName: Full=Putative CinA-related protein; chromosome 1 CDS22128 492 - 0.487805
STY3083 PBPRA3081 putative MazG proteinSubName: Full=Putative MazG protein; chromosome 1 CDS34973 819 - 0.401709
STY3204 PBPRA3100 hypothetical proteinRecName: Full=tRNA-modifying protein YgfZ; chromosome 1 CDS55350 990 + 0.437374
STY3498 PBPRA3254 putative ABC transporter, ATP-binding proteinSubName: Full=Putative ABC transporter, ATP-binding protein; chromosome 1 CDS203110 726 + 0.435262
STY3548 PBPRA3263 putative TldD, Zn-dependent proteases and theirinactivated homologsSubName: Full=Putative TldD, Zn-dependent proteases and theirinactivated homologs; chromosome 1 CDS211116 1464 - 0.454918
T3183 PBPRA3226 putative methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase I; EC=2.1.1.198; AltName: Full=16S rRNA 2-O-ribose C1402 methyltransferase; AltName: Full=rRNA (cytidine-2-O-)-methyltransferase RsmI; chromosome 1 CDS179904 861 - 0.457607
VV10589 PBPRA3227 hypothetical lipoproteinRecName: Full=Penicillin-binding protein activator LpoA; Short=PBP activator LpoA; Flags: Precursor; chromosome 1 CDS180817 1842 + 0.43051
VV2883 PBPRA3152 putative S-adenosylmethionine-dependent methyltransferaseRecName: Full=tRNA (guanine-N(7)-)-methyltransferase; EC=2.1.1.33; AltName: Full=tRNA (guanine(46)-N(7))-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase; chromosome 1 CDS102043 738 - 0.460705
VV3077 PBPRA3371 putative GTPaseRecName: Full=Putative ribosome biogenesis GTPase RsgA; EC=3.6.1.-; chromosome 1 CDS326464 1104 + 0.432971
XCC2797 PBPRA3250 hypothetical sugar phosphate isomeraseRecName: Full=Arabinose 5-phosphate isomerase; Short=API; EC=5.3.1.13; chromosome 1 CDS200534 972 + 0.450617
XCC3490 PBPRA3315 putative ElaA-like proteinSubName: Full=Putative ElaA-like protein; chromosome 1 CDS280419 453 + 0.408389
Y0131 PBPRA3231 putative stringent starvation protein BSubName: Full=Putative stringent starvation protein B; chromosome 1 CDS184221 507 - 0.475345
Y0626 PBPRA3354 putative nucleotide-binding proteinSubName: Full=Putative nucleotide-binding protein; chromosome 1 CDS319685 465 - 0.419355
YGGA PBPRA3127 putative Lysine efflux permeaseSubName: Full=Putative Lysine efflux permease; chromosome 1 CDS77860 636 + 0.410377
YGGS PBPRA3143 Predicted enzyme with a TIM-barrel foldSubName: Full=Predicted enzyme with a TIM-barrel fold; chromosome 1 CDS95331 735 + 0.44898
YPO3671 PBPRA3264 putative carbon-nitrogen hydrolaseSubName: Full=Putative carbon-nitrogen hydrolase; chromosome 1 CDS212580 819 - 0.413919
Z4554 PBPRA3244 hypothetical anti-sigma B factor antagonistSubName: Full=Hypothetical anti-sigma B factor antagonist; chromosome 1 CDS195716 312 - 0.423077