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COG category: General function prediction only
Genomic element: pRF

Number of genes found: 7

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# Rickettsia felis URRWXCal2, URRWXCal2; California 2

>RF_p18 TPR, tetratricopeptide repeat domain
ATGAGGTCATTTATGAATATATCACACTATCCTTGTGTTGGCAATAGTAG
TAGGGTAGTACCTGCTCATTCCCACAAAGCTTTAGCTAGTGCTGCTTCTC
GGAGCGTTAGCAACTCTTGTGCATTACCACAAAAACCTCATTCACAAAAA
AGTACAAAAGATAAATTAGAATATAAAACTGAATCTAAAGCTGCAAGGTT
AGTTAGTATATCTCATGACCGCGATTCTGCTGGTTTTATGGATCAAGCGG
ATAATGCAAACCATAATACCCAATCCCCAACAGAATTATTTAACTCTAAG
AGCCAGTCACGTAAAACAATCACAGTATTAATAAGTTTTTTAAAACTCAG
CAAATATGATGATGCGTGGCTAAAGCTAGGCAAGCAATTACTGTTACTAC
ACAAAACTCCAAATAAGCAAAAATTCTATAGATCTGCATTATGTTGTTTT
AAATCATCAATCAAAGCTCATCCTGATAATCACGTTGCATATTACTTCAG
CGGCATCATATTGTGTCTTCTTGGAAGATACGAAGAAGCGGTTAGGATGT
TTTTGTCCAGTCTTCGTAAAAACGCAGAAACAAGTACTACTTTGCTACAT
ACATTATCGGAGATGTTAAGCATTACAGAGGGGATAAGACTTGCTACGGG
AGGCGAGGATGTAAATGGTATTGGTAATAGTGATGCAGCTGTGCAGCAAG
ATTCTTCATCAAATAACAGAGATACAATTAACAAGGATTCAATATTTAAT
AAAACTCTAGACAAGCTAGAGATGGCAATCATCAACAAACTTCAAAGATG
CAAAATAGAAGGAGCAGTAAGTAATAGTATGGCTAAAGAACAAGAGCAGT
GGAACAGATATTTTGAACTAGGGATGTATTGGTATGGAAGAGAGCAGGGG
AATCATAAGTCACTCATGTATTTTAGAAGATGTCTGCAACTAAACCCTAA
GAATGAACAAGCAAATTATTATGTTGGTCTGATAATGCAAAAGCAGGGTA
GATACCATGAGAGCTTAGAGGCTTATAAGCAAGCAATATCATTAAGACCT
GACGAGGGGTTTTATTACTATATGGCATCGCAAGTTTATACGGATTTAGA
AGAATCTAAGGAAGCAATAGAGATGATAGATAAGGCAATATCCTTATCAC
CTAAAGATATAGCGTATAGGAATATGAAAGAACATATATTACGTGCATTT
GGAATAGAGCAAGATTTAGTAGATATAGTGAAGATTACCGGTGAATTACC
TAAGGTTTAA
>RF_p17 TPR, tetratricopeptide repeat domain
ATGAAAAAAAGAAATGAACAAGAAGCATTCAAACTCTTAACAAGTGGACA
ATTATTGGCATTGTATAGGAGTTATTCTAGAGCTGGAGAACTAAAATATG
CCTCTCCAGTTTTAGAGTATTTGTTGGAATCGACATATAGTGACGCAGAA
AGGTATTTTGAGAAAGCGGTTGTATTAAAAGAGATACTTAGAACAGAAGA
AGCACTTGAAGCGTGTGATAAGGCAATAGAGCTAAAGCCTGATTATGCGG
CAGCTTACGATTTAAATGGAAGAATTCTATATAGACCTTGGAAATACGAA
GAAGCAATCAAAGCCTTTGATAAGGTTATAGAACTTAATCCTGATTTTCA
GGACGTGTATTTAAACAAAGGATGGTGTTTAACTGAGATTGGGAGATATG
AGGAAGCGGTAGAATGCTTTAACATAGGTATAAAGAAAAATCAGTGTAGC
GAGGAATTATACGCAAGTAAGGCTTGGGTTCTTTTGCAAGAATTAAATCA
AAAAGATGAGGAAGCTTTGCAAGCGTATAAGAAAGCAATTGAGCTAAGTC
CCAAAGACAATATTTATTATTTTTTTGCCGCTCAAATATTAAAAGAATTA
GGGCAAGATGAGGAGGCTATAGCAATGATAGATGAGGCAATAGCGTTAGA
ACCTACTATGAAGGAATGCATTTTATATTGTTTTAAGAATGATGATTTTG
ACTATGTGGTGACATTAAGGAAGCGAGAGTGCATGAAGCTAACAAAAGCA
TATTTTCGTGAATAG
>RF_p16 Putative Zn-dependent protease
ATGAAAAATAAGAATTATATCCAAAGAAGCAGTATGAGATTGGGCGAAAA
GGAGCAAAAAACTTATTTTAAGCAAGGCATTAACTTTTTGGATCAAGGGA
AATATGAGAAAGCTTTGCAGATATTTGGGATGCTTTTGATGGGAGAGTCA
AAAAATGCAAGTTTTCATTATTACAAAGGTAATACACTTCATAAGCTTAA
AAGATACGAGGAGGCATTAGAAAGTTTTAAGGCAGCAATAAAGTTAAAGC
CATGGGAGGGAGCATATTACTATGGCCTTGCTAGTAGTTATTACGCTGTT
GGTAATGGGACTGAAGGGCTTGAGGCTTTACAAAAAGCAGTATCTGTTTA
TGGGGCTTCAGAAAAAATATACCACAAACATAATATGCTTGCGGGCTTTA
AGAGGGTAGAAGGCGGACATCAAGAGATGCAATTGAATGTTGTGGCTCAC
ACAGCAATAGAGTCATGTAGTCATCTTAAACAATATGCAGAGGTAAAAGT
AGGAGATAATTATAGTTTTGGATTTATGAGATAA
>RF_p42 Ankyrin repeat
ATGCATCACTTAATTGATCAACTTAAATCTAAAAATAATATTTTCTATAT
AAGAGCACTAGTACCAATGATCGTGCTTTGTGTTTTATTAATTAGTAAGA
CAGTTTATGGATATGATACAAAATTAGAGCATTTATGTAAGGCTATCAGT
AATAACAATATAGACCTCGTAAAACAGGCTCAACAAAAATCACAATATAA
TCAACGATGTATCCAAGAGCGTGAAACACCTTTGATATTAGCCATCAGCA
ACAATAATATTAAAGTAGTACAAATGCTATTAGATTTTGGAGTTGATATA
GAACAAGAAGGACGATACGGTGGAGCAGCTCTATATAATGCTATTTGTCA
TGATACAAATATAGTGAAATTACTAATAAAGCATGGTGCAAATATAAATA
AACGCCTATCTGAGGGTAGTAGAGAAACGCCTTTAATAAAAGCTACTAAG
TGTTTTGAGAATGGTAGTATCGCTAACACAGAACATATTAAAATATTGCT
TAAGTATGGAGCTGATATAAATGCGAAAGATGTAAATGGTATTACAGCAT
TAAAAATGGCTGAGATGCAAAATGATCAAAGTGCAATCAATTTATTACGT
TCCTCTGGCAAAAAGTAA
>RF_p14 Ankyrin repeat
GTGGTGAGTATGAAACAGGTAGAAAGACAGAAGCTTAATCAAAAATTAAT
GAGAGCTGCAGCTACAGGAGATATAGAGGCAGTACAAAAGCTTGTGCTTC
GTGGTGCTGATATATATTGTCGGGATCATCAAGGGGATACTGCATTATCA
CTTGCAGCAGGTAGCGGTTATTTAGATATTTTAGATATTTAA
>RF_p26 lon, ATP-dependent protease La, bacterial type
ATGAAAAATGTAGAATATCAAGAGAATATAGCTGAAGTGGAAGAAGTAAA
GATACGTCGTAAAAATATGAAGAGTTATGTATTAGCTCTTGAACTATGTA
ATAAAGTCATGAAAACAGATGGCATTGATAATATACCTCGTGAAGATCAT
ACCAATCTCTTTAACTTCAAAGTATATAAAAATGGCATAGTGGCACTGAG
CGAGTTATTAGTGCGGACTATAGATGAAAAAACAAAAATTAAAGATGAGA
AGTTAATAGAAGGGTACGAACCGATAATAAACTTACTTGAGAAATTCATT
AGACCTAAAAATGATGCAGAACATTATTTTAGGCAAGGTCAGAGGTTGTA
TGGGAATGGGGAATATGAAGAGGCATTAATATCTTTCGAGGAAGCAAGTA
ATATTATTACCCGTTCTATGTATTACCATCATAAAGGAAAAGCACTTTTA
AAGTTAGAGCGGGCAGAAGAGGCAATTAAAGCTTTCAATAGGGCGATAGA
GCTAAAGCCTGATTATGCTGAAGCTTATAATGAAAAAGGTTATGCTTTAG
CCAGTTTAGAAAAACATAACGACGCTATTAGCTGCTACAATAAGGCGATA
GCACTAAAGCCTGATTATGCAGATGCTTATCGTTGTAAGGGCGATATACT
CCATAATCTTAAGAGATACGAGGAAGCGATAAAAGAATATAACAAAGCTA
TAAAGCTAGATCCTAATTTTCAGCACGCATTAAATAATAAAAAGGAGGCA
CTACAAGCTATAGCACGTCAAGCAAGTGACAAAGATTTTGAAGTACTATT
ATCAAATACACCGCTGCCTTCAAATGTTGGAAAGGTAGCTGAGCAGAAAA
TAGCACGCCTTAAAGGCAGTCAGGGTAGTAATGACGGAGATAGAAGCTAC
ACAGAAAAATATCTAAACTATCTTTTCAGACTTCCATGGGGCAAGTATGA
TAAAGCATCTATTGATATTATCGAAGCTGAGAAAGTGCTAAACGAAAATC
AATATGGTCTTGAGAGCATTAAACAGAAGATTATAGAAGCTTTAGCATTC
ATGGCAAACTCTCAGAATGCCAAACCTCCAATACTATGTTTAGTTGATGC
TCCTGGAGTTGGAAAAACATCAATTGCTAAAATAATATCAAAAGCACTAA
ACCGCAAAAGCGTAACATTATCACTTGCTGGAGCAAGAGATGAGGACTTG
ATCAGGGGGTGTATGGATTTCTATATGGGTGCAAGACCCGGTAAAGTACT
GTCACTACTTTCTGAAGTAGGTAGTAGCAATCCCGTAATGATTTTAGACG
AAATAGATAAAATCAGTCAAGAAAGAGGGGCGTTACTTGAAGGAGCATTA
CTACAGTTAATAGATCCATCACAAAATGATAGCTTTACTGATGATTACTT
TGATTTTGGCTATGACATGTCAAAAGTATTTTTCATCGCCACAGCAAACT
CAATCGATAATATATCATATCCACTATTACATCGTATGGAAGTAATTGAT
ATTAGTGGTTATACCGATAATGAAAAAGTTAAAATCACACAAGATTACAT
CATACCAAAGCTAATGAAAGAGGCAAATGTTCCAAGCAACAAATTCACCC
TCTCAAACGAACTGATTAGGTACATCATCGAGAATTATACTTGGGAATCA
GGCGTAAGAGATATAGAGCGAAAAATAAAAGAGCTATTACAAAAATCTCT
CTTAGCAGAAGCAAGAAAGGAGCAAATCACCTTAAATAAGGAAACTATAG
AAGAATATTTCAAGCACTCTAAATATCACAAACAAAAACTACAAGATGAT
GAAGTTACTATTGGTATGATCAACGGTCTTGCTCATACAGCAAGGGGAGG
CGATTTAATTAAAATAGAAGCTTCAAAATACAAAGGTGACGGAAAGATTA
AAGCAACAGGCAAACTAGGAGAAGTATTAAAAGAATCAATAGATGCTGCG
ATGACCTGTTTAAAATCAAGCATAGATTCTAAAACTAAAGAAATCAACGA
TGACATATTAAAGACTCATGACATACATATACATCTGCCAGCAGGAGCAA
CGCCTAAAAACGGACCATCTGCGGGCATCACTATATATACGGCTCTTTAC
TCACTACTTAGTAACAAGAAGATCAGACAAGATATAGCAATGACTGGTGA
GATTACATTAAAGGGTAGAGTGCTTGAGATAGGGGGGCTTAAAGAAAAGC
TAACAGCTGCAGTAAGAGAAGGTATTAAGGAAGTCATCATCCCTAAGGAT
AACGAGCGTGACTTAGCCGAAATACCTGAGGAAATTAAGCAAGCACTAAT
AATACATACAGTATCAAATACTAGTGAGATACTAAGGATAGTATTTGATA
CTAAAGTATCTAATAAAAATACTAAACAAAAAACACCAAAGGAAAATATG
GGCAAAGTATTGCAATTTCCTAAACAGAAGAAAGATAAAAAGAATTGA
>RF_p11 pat2, Patatin-like phospholipase
ATGACAACAGCAATACACACACAACAAACATTTGAGCATATCGAACAGGG
AACAGTCGACAATATCAAGGGTGATAATACGACTCATGATAGTACATCAG
AATCCATCAAGAGTAACCGAATATTATCATTATCCGGAGGTGGAGTTAAG
GGGATAGCGGAGCTAGTGGTGCTAGCTGAGATAGAAGAGCGAACAGGTAA
ATCTATATCAGAATTATTTCCTATTATTTCCGGTACTAGTGTAGGCGGTC
TTATTGCGGGCTTGCTAACTATCCCAAAAGAGCAAGGCTCAAACATAGCT
AAATATAGTGCAAAAGATGCTTTGAAGATATTTACAGACGCAGCACCGAA
GATTTTTGAACATCATTGGTATGACGGAATAAAACAAATATTCACCCATA
AGCATAGTCAAGGACCATTAAAGGAAATATTAGAGCAGCATTTGGCAGGA
TTAAGATTAGATGATACAACATCTAGATTAATAATCCCTGTCACTGATTT
AGCAAGCAAAGATAAAGAGGTTAAGATATTTGATAGTCATGATTCTTATA
GTCCGCATATAAGAGTTCAGGACGTGTTACTAGCAACCACTGCAGCACCA
ACATATTTTAAGCCTGTAACTAATCAAGAGCATATTAAGGGTTATGAGAA
TCAAGAGGATGCACTATATGCGTATGCAGATGGAGGGCTTGGGGCTAATA
GACCGGCATATGAAGCACTCAAGATATTAAAGAACGGTCATAGTAGGGAA
GAGAATGCCAAAATACTTGATGATACTATGGTATTATCACTTAACTTTGA
TAATGATCATAAGGCTAGCAGCTCCATACCTAAGATAGGATTTGATGGAG
TAATAGGATGGCTTGTTAAAGGAAAGCTAGTTAGTCGTCTAATGCAAAGC
AGTGAAGATAGCTCCACAGCAGAGGTAAGAGTAGGTTTACCGGGCGAGGA
TGAGTTTGTGGAGGTGAAGCTACCTATTACTAAAGAGACAAGTAGTTTAG
ATAATAGTAGCCTTAAAAACATAGAAGCATTAGTAGCGGTAGGTCGTAAA
TATATAGAGGAGCATACGGAGCAGTTACAAAAGCTATGTGATAATTTAGT
AAAATATGTAGAGGTCGAGACTAAAGCTATGACTCATGAGAAAGCAGCAA
AAGACGCGGGGGGAGCAATAGAACTTGGTTCAGGCTTAGATTTAGAGAAT
AGTAGTGATGACGATGCTATGATAAATAAGGAAGCTATAGCAAATAGTAA
TGAAGATGCTAATAAGAGCGATGGTGATGATGTTGTAAGTAACTCTATTA
TCACCAATGAAAATAGAGAGCAGATACTGGACGGTATCAAGCAGTATCTC
ACATCATTTGCAAATGATAACCCTGATTTACAGGAAAATATTGTTCAGTA
TTTAACTTCTGTGAATGATTATAGTAATCAGGAATTAGAGAAGCTAATAC
TGGATTTTGCAGAAGGGCAAAAGGTAGTGCAAGAAATGGAGCTACATGAG
GCAGAGAGCGTACTTGCTCCTTATATGAGTTGCGGCATGGAAGCTAATCA
AGAAGCTATGGAACTTGAAGGGATAGATGATGAGGTACAAAATCATGAGG
TTTTGGCGTGA