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2024-06-29 11:07:30

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome

Number of genes found: 66

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Geobacter sulfurreducens PCA, PCA
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA GSU1222 histone deacetylase/AcuC/AphA family proteinSubName: Full=Histone deacetylase family protein; chromosome CDS1326135 1158 + 0.614853
NA GSU0816 ABC transporter, ATP-binding proteinSubName: Full=Organic solvent tolerance ABC transporter, ATP-binding protein; chromosome CDS875763 747 - 0.610442
NA GSU2536 dienelactone hydrolase family proteinSubName: Full=Dienelactone hydrolase family protein; chromosome CDS2798512 813 - 0.653137
NA GSU2627 biotin synthesis protein, putativeRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS2898797 804 - 0.677861
NA GSU3018 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase; chromosome CDS3311879 759 + 0.421607
NA GSU2898 high-molecular-weight cytochrome cSubName: Full=Lipoprotein cytochrome c; chromosome CDS3182745 8412 - 0.649786
NA GSU0925 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS993989 765 + 0.654902
NA GSU0802 oxidoreductase, short chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome CDS860404 717 - 0.670851
NA GSU1227 ABC transporter, ATP-binding protein chromosome CDS1329835 819 + 0.578755
NA GSU3168 beta-ketoacyl synthase domain proteinSubName: Full=Uncharacterized protein; chromosome CDS3476577 1194 + 0.672529
NA GSU1103 long-chain-fatty-acid--CoA ligase, putativeSubName: Full=Acyl-CoA synthetase, AMP-forming; chromosome CDS1188772 1659 + 0.582881
NA GSU0993 conserved hypothetical protein chromosome CDS1074122 423 - 0.640662
NA GSU0696 glucose 1-dehydrogenaseSubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome CDS735947 759 + 0.682477
NA GSU0817 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS876513 774 - 0.599483
NA GSU0628 conserved domain protein chromosome CDS665182 807 + 0.60347
NA GSU0690 conserved hypothetical proteinSubName: Full=rRNA methyltransferase, putative; chromosome CDS730390 570 + 0.705263
NA GSU1343 isochorismatase family proteinSubName: Full=Amidohydrolase, YcaC-related protein; chromosome CDS1469681 654 + 0.619266
NA GSU0926 mce-related proteinSubName: Full=ABC transporter, periplasmic substrate-binding protein, MCE domain-containing; chromosome CDS994769 1083 + 0.650046
NA GSU2400 conserved hypothetical proteinSubName: Full=Acetoacetate decarboxylase family protein; chromosome CDS2633506 834 + 0.653477
NA GSU1214 tetracenomycin polyketide synthesis 8-o-methyltransferase, putativeSubName: Full=Helix-turn-helix SAM-dependent methyltransferase; chromosome CDS1317073 1002 + 0.639721
NA GSU2204 cytochrome c family protein, putativeSubName: Full=Outer membrane channel cytochrome c, 1 heme-binding site; chromosome CDS2418361 2028 + 0.607988
NA GSU0813 conserved hypothetical proteinSubName: Full=Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein; chromosome CDS873273 603 - 0.587065
NA GSU0630 conserved domain proteinSubName: Full=SAM-dependent methyltransferase, type 11; chromosome CDS667388 723 + 0.618257
NA GSU2290 pyrazinamidase/nicotinamidase, putativeSubName: Full=Nicotinamidase; chromosome CDS2508305 606 + 0.630363
NA GSU0585 fumarylacetoacetate hydrolase family proteinSubName: Full=Fumarylacetoacetate hydrolase family protein; chromosome CDS619169 657 - 0.621005
NA GSU0569 isochorismatase family proteinSubName: Full=Nicotinamidase-related cysteine hydrolase; chromosome CDS598373 549 + 0.655738
NA GSU1128 conserved hypothetical proteinSubName: Full=Acyl-CoA thioesterase; chromosome CDS1211690 444 + 0.619369
NA GSU1002 isochorismatase family proteinSubName: Full=Amidohydrolase, YcaC-related protein; chromosome CDS1082223 564 - 0.608156
NA GSU1899 virulence factor Mce family proteinSubName: Full=ABC transporter, periplasmic substrate-binding protein, MCE domain-containing; chromosome CDS2076665 1050 - 0.56
NA GSU1900 transporter, putativeSubName: Full=Uncharacterized protein; chromosome CDS2077760 774 - 0.563307
NA GSU0632 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase; chromosome CDS669113 804 + 0.593284
NA GSU0570 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase, putative; chromosome CDS598962 606 + 0.69967
NA GSU1575 hypothetical proteinSubName: Full=SAM-dependent methyltransferase, putative; chromosome CDS1726864 729 + 0.621399
NA GSU2746 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS3022635 1080 + 0.638889
NA GSU1506 hypothetical proteinSubName: Full=SAM-dependent methyltransferase, FkbM family; chromosome CDS1651202 960 + 0.535417
NA GSU3181 beta-ketoacyl synthase domain proteinSubName: Full=Uncharacterized protein; chromosome CDS3489250 1044 + 0.600575
NA GSU1576 oxidoreductase, short chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome CDS1727617 807 + 0.589839
NA GSU1394 laccase family proteinSubName: Full=Laccase family multicopper oxidase; chromosome CDS1530745 3912 - 0.644172
NA GSU0679 tellurite resistance protein-related proteinSubName: Full=SAM-dependent methyltransferase; chromosome CDS712353 591 + 0.631134
NA GSU0924 ABC transporter, permease protein, putativeSubName: Full=Uncharacterized protein; chromosome CDS993208 771 + 0.623865
NA GSU1282 hypothetical proteinSubName: Full=Outer membrane channel, putative; chromosome CDS1397350 1593 + 0.590082
NA GSU1047 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase, putative; chromosome CDS1134505 1083 + 0.694367
NA GSU2583 isochorismatase family proteinSubName: Full=Amidohydrolase, YcaC-related protein; chromosome CDS2846014 633 - 0.614534
NA GSU1844 IPT/TIG domain protein, putativeSubName: Full=IPT/TIG domain protein; chromosome CDS2012793 2163 - 0.6135
NA GSU1252 conserved domain proteinSubName: Full=Multicopper oxidase with phosphopantotheine attachment site; chromosome CDS1360117 4959 + 0.644081
NA GSU2713 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2989184 690 + 0.572464
NA GSU2657 spore coat protein ASubName: Full=Multicopper oxidase, manganese oxidase family; chromosome CDS2928502 2523 - 0.615141
NA GSU2414 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2646950 2499 + 0.689876
NA GSU2248 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2463038 681 - 0.51395
NA GSU0549 conserved domain proteinSubName: Full=SAM-dependent methyltransferase, putative; chromosome CDS583123 681 + 0.69163
NA GSU0815 mce-related proteinSubName: Full=ABC transporter, periplasmic substrate-binding protein, MCE family; chromosome CDS875301 450 - 0.604444
NA GSU1513 conserved domain proteinSubName: Full=SAM-dependent methyltransferase, type 11; chromosome CDS1659934 927 + 0.505933
NA GSU3417 dioxygenase, putativeSubName: Full=Dioxygenase, putative; chromosome CDS3759521 1530 + 0.668627
NA GSU0196 thioesterase family proteinSubName: Full=Acyl-CoA thioesterase; chromosome CDS207610 489 - 0.660532
NA GSU2441 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase; chromosome CDS2674961 747 - 0.633199
NA GSU2510 hypothetical proteinSubName: Full=SAM-dependent methyltransferase; chromosome CDS2768336 927 + 0.724919
NA GSU2792 conserved hypothetical proteinSubName: Full=SAM-dependent methyltransferase, putative; chromosome CDS3071446 753 + 0.693227
NA GSU0459 beta-ketoacyl synthase domain proteinSubName: Full=3-oxoacyl-(Acyl carrier protein) synthase-related protein; chromosome CDS489577 1026 - 0.674464
acpP-1 GSU0242 acyl carrier proteinSubName: Full=Acyl carrier protein; chromosome CDS249795 258 - 0.624031
acpP-2 GSU1604 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1755718 234 + 0.504274
alkK GSU0229 medium-chain-fatty-acid--CoA ligaseSubName: Full=Acyl-CoA synthetase, AMP-forming; chromosome CDS236228 1653 + 0.636419
elbB GSU0074 enhancing lycopene biosynthesis protein 2SubName: Full=Isoprenoid biosynthesis amidotransferase-like protein ElbB; chromosome CDS88132 654 - 0.62844
fabF-1 GSU0460 3-oxoacyl-(acyl-carrier-protein) synthase IISubName: Full=3-oxoacyl-(Acyl carrier protein) synthase II; chromosome CDS490614 1206 - 0.6733
fabF-2 GSU1605 3-oxoacyl-(acyl-carrier-protein) synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1756090 1233 + 0.580697
fabG-1 GSU0461 3-oxoacyl-(acyl carrier protein) reductaseSubName: Full=3-oxoacyl-(Acyl carrier protein) reductase; chromosome CDS491954 741 - 0.670715
fabG-2 GSU1603 3-oxoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-(Acyl carrier protein) reductase; chromosome CDS1754891 741 + 0.588394