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2024-06-17 09:05:30

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome 1

Number of genes found: 53

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA1667 putative Beta-ketoacyl synthaseSubName: Full=Putative Beta-ketoacyl synthase; chromosome 1 CDS1899721 10149 - 0.435117
NA PBPRA1524 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1725751 291 - 0.343643
NA PBPRA1870 hypothetical oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Hypothetical oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS2154407 1989 + 0.43992
NA PBPRA2213 hypothetical short chain dehydrogenaseSubName: Full=Hypothetical short chain dehydrogenase; chromosome 1 CDS2547056 1992 + 0.429719
AGR_PAT_ PBPRA1404 hypothetical permease component of C4 dicarboxylatetransporterSubName: Full=Hypothetical permease component of C4 dicarboxylatetransporter; chromosome 1 CDS1578465 1380 + 0.431884
ATU3591 PBPRA2818 hypothetical oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Hypothetical oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS3265857 828 - 0.442029
BA2370 PBPRA1662 putative EntE, Peptide arylation enzymesSubName: Full=Putative EntE, Peptide arylation enzymes; chromosome 1 CDS1892709 1644 - 0.444039
BB3755 PBPRA1196 putative acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome 1 CDS1345302 237 + 0.409283
BPP4109 PBPRA0983 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1085572 1794 - 0.468785
BT4646 PBPRA2948 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS3379030 189 + 0.349206
C0250 PBPRA2919 hypothetical SAM-dependent methyltransferaseSubName: Full=Hypothetical SAM-dependent methyltransferase; chromosome 1 CDS3351457 744 - 0.40457
C2229 PBPRA2791 putative SAM-dependent methyltransferaseSubName: Full=Putative SAM-dependent methyltransferase; chromosome 1 CDS3237024 849 + 0.433451
CV0321 PBPRA2170 putative imidazolonepropionaseRecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; chromosome 1 CDS2493429 1236 + 0.46521
FABB PBPRA2658 putative 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=Putative 3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome 1 CDS3081183 1215 - 0.454321
FABF-1 PBPRA1197 Beta-ketoacyl-acyl carrier protein synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome 1 CDS1345623 1242 + 0.454106
FABG PBPRA1195 Putative 3-oxoacyl-(acyl-carrier-protein) reductase, FabGSubName: Full=Putative 3-oxoacyl-(Acyl-carrier-protein) reductase, FabG; chromosome 1 CDS1344408 735 + 0.440816
FABG-9 PBPRA1829 hypothetical oxidoreductase, short chaindehydrogenase/reductase familySubName: Full=Hypothetical oxidoreductase, short chaindehydrogenase/reductase family; chromosome 1 CDS2111853 756 + 0.402116
FADD PBPRA1075 putative long-chain-fatty-acid-CoA ligaseSubName: Full=Putative long-chain-fatty-acid-CoA ligase; chromosome 1 CDS1193351 1692 + 0.429669
OB0669 PBPRA1287 hypothetical long-chain-fatty-acid-CoAligaseSubName: Full=Hypothetical long-chain-fatty-acid-CoAligase; chromosome 1 CDS1458124 1548 - 0.412145
PA2832 PBPRA1684 Putative thiopurine methyltransferaseRecName: Full=Thiopurine S-methyltransferase; EC=2.1.1.67; AltName: Full=Thiopurine methyltransferase; chromosome 1 CDS1929359 642 + 0.433022
PFAA PBPRA1460 omega-3 polyunsaturated fatty acid synthase PfaASubName: Full=Omega-3 polyunsaturated fatty acid synthase PfaA; chromosome 1 CDS1643870 7746 - 0.461012
PFAB PBPRA1459 omega-3 polyunsaturated fatty acid synthase PfaBSubName: Full=Omega-3 polyunsaturated fatty acid synthase PfaB; chromosome 1 CDS1641771 2076 - 0.445568
PFAC PBPRA1458 omega-3 polyunsaturated fatty acid synthase PfaCSubName: Full=Omega-3 polyunsaturated fatty acid synthase PfaC; chromosome 1 CDS1635898 6021 - 0.449095
PLU2320 PBPRA1668 hypothetical non-ribosomal peptide synthetaseSubName: Full=Hypothetical non-ribosomal peptide synthetase; chromosome 1 CDS1909933 6189 - 0.443852
PLU2321 PBPRA1666 putative AMP-binding enzymeSubName: Full=Putative AMP-binding enzyme; chromosome 1 CDS1897699 1725 - 0.448116
PLU3069 PBPRA2621 hypothetical o-succinylbenzoate-CoA ligaseSubName: Full=Hypothetical o-succinylbenzoate-CoA ligase; chromosome 1 CDS3034720 1437 - 0.459986
PLU3074 PBPRA2625 hypothetical menaquinone-specific isochorismate synthaseSubName: Full=Hypothetical menaquinone-specific isochorismate synthase; chromosome 1 CDS3039685 1401 - 0.435403
PNCA PBPRA3449 putative pyrazinamidase/nicotinamidase PncASubName: Full=Putative pyrazinamidase/nicotinamidase PncA; chromosome 1 CDS3899113 630 + 0.396825
PP0279 PBPRA2469 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2860277 1197 - 0.418546
RS04226 PBPRA1665 putative reductase componentSubName: Full=Putative reductase component; chromosome 1 CDS1896624 1122 - 0.434046
RSP1187 PBPRA1272 Putative N-acyl-D-aspartate/D-glutamate deacylaseSubName: Full=Putative N-acyl-D-aspartate/D-glutamate deacylase; chromosome 1 CDS1443161 1440 + 0.452083
S2001 PBPRA1110 Conserved hypothetical proteinRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome 1 CDS1231172 735 - 0.432653
S3451 PBPRA3246 putative ABC superfamily transport proteinSubName: Full=Putative ABC superfamily transport protein; chromosome 1 CDS3681119 501 - 0.413174
S4240 PBPRA3533 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome 1 CDS3993920 819 - 0.46398
SMTA PBPRA2379 putative SmtA proteinSubName: Full=Putative SmtA protein; chromosome 1 CDS2747607 813 - 0.426814
STM3312 PBPRA3247 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS3681687 783 - 0.457216
T3230 PBPRA3248 putative ABC transporter, ATP-binding proteinSubName: Full=Putative ABC transporter, ATP-binding protein; chromosome 1 CDS3682688 816 - 0.426471
VP0880 PBPRA0686 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS759400 1713 + 0.433742
VP1910 PBPRA1403 hypothetical permease proteinSubName: Full=Hypothetical permease protein; chromosome 1 CDS1577902 567 + 0.402116
VP1911 PBPRA0821 hypothetical extracellular solute-binding protein, family 7SubName: Full=Hypothetical extracellular solute-binding protein, family 7; chromosome 1 CDS908222 1086 + 0.424494
VP2120 PBPRA1104 hypothetical oxidoreductase, short-chaindehydrogenase/reductase familySubName: Full=Hypothetical oxidoreductase, short-chaindehydrogenase/reductase family; chromosome 1 CDS1225165 699 - 0.393419
VP2944 PBPRA0166 hypothetical O-Methyltransferase-relateproteinSubName: Full=Hypothetical O-Methyltransferase-relateprotein; chromosome 1 CDS169925 798 + 0.458647
VV0507 PBPRA1402 hypothetical extracellular solute-binding protein,family 7SubName: Full=Hypothetical extracellular solute-binding protein,family 7; chromosome 1 CDS1576750 1086 + 0.441989
XF2276 PBPRA1464 acyl-CoA ligaseSubName: Full=Acyl-CoA ligase; chromosome 1 CDS1655570 1758 + 0.436291
Y1100 PBPRA2815 putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter ATP-binding protein; chromosome 1 CDS3261282 663 - 0.475113
Y2402 PBPRA1664 hypothetical thioesteraseSubName: Full=Hypothetical thioesterase; chromosome 1 CDS1895774 837 - 0.424134
YECP PBPRA1109 Conserved hypothetical proteinRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome 1 CDS1230180 975 - 0.43282
YJCS PBPRA1265 hypothetical beta-lactamaseSubName: Full=Hypothetical beta-lactamase; chromosome 1 CDS1432565 2106 + 0.427825
YPO2215 PBPRA2481 putative oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Putative oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS2874413 744 + 0.446237
YPO3572 PBPRA3245 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS3680463 645 - 0.410853
Z0649 PBPRA2814 hypothetical permeaseSubName: Full=Hypothetical permease; chromosome 1 CDS3258820 2466 - 0.466748
Z0996 PBPRA2327 putative biotin synthesis protein BioCRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome 1 CDS2679331 840 - 0.445238
Z4573 PBPRA3504 putative sigma cross-reacting protein 27ASubName: Full=Putative sigma cross-reacting protein 27A; chromosome 1 CDS3963663 651 + 0.447005