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2024-05-29 12:39:53

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 134

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu3411 chromosome CDS4031310 900 - 0.303333
NA plu2820 chromosome CDS3350080 1677 + 0.339893
NA plu4457 chromosome CDS5211179 1122 + 0.375223
NA plu1675 chromosome CDS1996912 2085 - 0.384173
NA plu2598 chromosome CDS3041021 1119 - 0.459339
NA plu0571 chromosome CDS646740 1107 + 0.368564
NA plu0848 chromosome CDS979372 486 + 0.347737
NA plu2132 chromosome CDS2515649 696 + 0.484195
NA plu2152 chromosome CDS2537081 744 + 0.376344
NA plu2398 chromosome CDS2817105 2082 + 0.382805
NA plu2195 chromosome CDS2582780 237 + 0.447257
NA plu2911 chromosome CDS3435550 816 - 0.403186
NA plu4418 chromosome CDS5166814 657 + 0.474886
NA plu4259 chromosome CDS4983217 624 - 0.423077
NA plu3444 chromosome CDS4057232 312 - 0.432692
NA plu2125 chromosome CDS2510368 237 - 0.434599
NA plu1911 chromosome CDS2278708 1029 - 0.38484
NA plu0239 chromosome CDS253901 570 - 0.412281
NA plu4565 chromosome CDS5329532 1698 - 0.398704
NA plu3529 chromosome CDS4127578 789 - 0.378961
NA plu0396 chromosome CDS427632 408 + 0.409314
NA plu4686 chromosome CDS5465936 1524 + 0.442913
NA plu2338 chromosome CDS2754417 441 - 0.365079
NA plu4223 chromosome CDS4940978 2682 - 0.521253
NA plu2517 chromosome CDS2961704 2085 - 0.383693
NA plu0599 chromosome CDS679941 996 - 0.435743
NA plu0363 chromosome CDS388853 2646 - 0.490552
NA plu1186 chromosome CDS1368836 612 + 0.325163
NA plu1187 chromosome CDS1369496 642 - 0.38785
NA plu2780 chromosome CDS3298249 1377 + 0.427015
NA plu1773 chromosome CDS2115252 1731 - 0.440208
NA plu1693 chromosome CDS2019719 2067 - 0.397678
NA plu2287 chromosome CDS2684731 2583 - 0.491289
NA plu2076 chromosome CDS2459773 1752 + 0.421804
NA plu0198 chromosome CDS205881 576 - 0.439236
NA plu0701 chromosome CDS810304 672 + 0.41369
NA plu2231 chromosome CDS2624343 264 - 0.397727
NA plu2604 chromosome CDS3045733 351 - 0.404558
NA plu3164 chromosome CDS3724793 621 + 0.438003
NA plu3821 chromosome CDS4489199 921 + 0.452769
NA plu1653 chromosome CDS1971785 2100 - 0.396667
NA plu1625 chromosome CDS1940992 900 - 0.387778
NA plu0643 chromosome CDS734216 6372 + 0.521343
NA plu3820 chromosome CDS4488317 858 + 0.439394
NA plu1716 chromosome CDS2046005 2085 - 0.394724
NA plu3822 chromosome CDS4490122 456 + 0.510965
NA plu1572 chromosome CDS1878570 621 - 0.386473
NA plu0451 chromosome CDS479186 780 + 0.297436
NA plu4346 chromosome CDS5076996 1326 - 0.292609
NA plu1168 chromosome CDS1353190 273 - 0.399267
NA plu3437 chromosome CDS4050155 936 - 0.443376
NA plu4458 chromosome CDS5212323 2226 + 0.378706
NA plu1733 Type 4 prepilin-like proteins leader peptide processing enzyme (Pectic enzymes secretion protein outO) [Includes: Leader peptidase (Prepilin peptidasechromosome CDS2069076 795 + 0.506918
aat plu1596 leucyl, phenylalanyl-tRNA--protein transferasechromosome CDS1903041 696 - 0.448276
ahpC plu3907 alkyl hydroperoxide reductase, small subunit (antioxidant)chromosome CDS4579165 603 + 0.472637
bcp plu2748 bacterioferritin comigratory proteinchromosome CDS3259660 471 + 0.424628
clpA plu1594 ATP-dependent Clp protease ATP-binding subunit ClpAchromosome CDS1900290 2277 + 0.455863
clpB plu1270 heat shock protein F84.1chromosome CDS1469770 2574 + 0.447552
clpP plu3869 ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp)chromosome CDS4545372 624 - 0.43109
clpX plu3868 ATP-dependent Clp protease ATP-binding subunitchromosome CDS4543964 1272 - 0.440252
cydC plu1597 Transport ATP-binding protein CydCchromosome CDS1903740 1749 - 0.474557
cydD plu1598 Transport ATP-binding protein CydDchromosome CDS1905491 1770 - 0.472316
cyoE plu3879 protoheme IX farnesyltransferase (heme O synthase)chromosome CDS4555862 885 + 0.437288
cysT plu1388 Sulfate transport system permease protein cysTchromosome CDS1667330 834 + 0.459233
degQ plu4018 Protease precursor DegQchromosome CDS4707551 1377 + 0.440813
degS plu4022 Protease precursor DegSchromosome CDS4711727 1059 + 0.442871
djlA plu0613 DnaJ-like protein DjlAchromosome CDS696952 822 + 0.46837
dnaJ plu0580 heat shock protein dnaJ (HSP40) (chaperone protein)chromosome CDS657943 1119 + 0.472744
dnaK plu0579 chaperone protein (heat shock protein 70) (heat shock 70 kDa protein) (HSP70)chromosome CDS655919 1911 + 0.478807
dsbA plu0381 Disulfide interchange protein DsbA precursorchromosome CDS410589 624 + 0.427885
dsbB plu2564 Disulfide bond formation protein B (disulfide oxidoreductase)chromosome CDS3009614 510 + 0.431373
dsbC plu3551 Thiol:disulfide interchange protein DsbC precursorchromosome CDS4186031 708 - 0.423729
dsbD plu4139 thiol:disulfide interchange protein dsbD precursor (C-type cytochrome biogenesis protein cycZ) (inner membrane copper tolerance protein)chromosome CDS4828928 1728 + 0.451389
fdhE plu4896 Protein fdhE, affects formate dehydrogenase-Nchromosome CDS5671931 930 + 0.431183
fklB plu4561 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase (PPiase) (Rotamase) (FKBP22)chromosome CDS5325128 639 - 0.478873
fkpA plu0424 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS452965 765 + 0.43268
fkpB plu0593 peptidylprolyl isomerasechromosome CDS675284 471 + 0.433121
flgA plu1914 Flagella basal body P-ring formation protein FlgA precursorchromosome CDS2281063 660 - 0.422727
flgJ plu1923 Peptidoglycan hydrolase FlgJ (Muramidase flgJ)chromosome CDS2288270 945 + 0.485714
flgN plu1912 Flagella synthesis protein FlgNchromosome CDS2280184 441 - 0.446712
fliJ plu1944 Flagellar protein FliJchromosome CDS2309817 444 - 0.45045
fliS plu1952 Flagellar protein FliSchromosome CDS2317842 411 - 0.437956
ftsH plu4535 cell division proteinchromosome CDS5296811 1962 - 0.464832
gcp plu3976 O-sialoglycoprotein endopeptidase (glycoprotease)chromosome CDS4662154 1014 - 0.472387
glnD plu0670 uridylyltransferasechromosome CDS768341 2649 - 0.453379
glnE plu3969 glutamate-ammonia-ligase adenylyltransferase (glutamine-synthetase adenylyltransferase) (ATASE)chromosome CDS4653932 2871 - 0.460815
groEL plu4134 60 kDa chaperonin (protein Cpn60) (GroEL protein)chromosome CDS4822824 1647 - 0.469338
groES plu4135 10 kDa chaperonin (Protein CPN10) (Protein GROES)chromosome CDS4824520 294 - 0.438776
grpE plu3372 GrpE protein (HSP-70 cofactor) (heat shock protein B25.3) (HSP24)chromosome CDS4000675 582 - 0.448454
grxA plu1581 glutaredoxin 1 (Grx1)chromosome CDS1889263 261 - 0.452107
gst plu2594 Glutathione S-transferasechromosome CDS3037044 606 + 0.409241
hflC plu4578 Lambda CII stability-governing protein HflCchromosome CDS5343379 1011 - 0.454006
hflK plu4579 protease specific for phage lambda cII repressorchromosome CDS5344395 1221 - 0.481572
hscA plu3279 Chaperone protein hscA (Hsc66)chromosome CDS3894370 1851 - 0.486764
hscB plu3280 Chaperone protein hscB (HSC20)chromosome CDS3896232 522 - 0.450192
hslJ plu2144 Heat shock protein HslJchromosome CDS2526677 414 - 0.396135
hslO plu0099 33 kDa chaperonin (Heat shock protein 33) (HSP33)chromosome CDS95303 873 + 0.428408
hslU plu4763 ATP-dependent Hsl protease ATP-binding subunit HslU (heat shock protein)chromosome CDS5545174 1332 + 0.465465
hslV plu4762 ATP-dependent protease HslV (heat shock protein)chromosome CDS5544632 531 + 0.480226
htpG plu3837 heat shock protein htpG (high temperature protein G) (heat shock protein C62.5)chromosome CDS4508191 1893 - 0.416799
htpX plu2681 protease HtpX (heat shock protein)chromosome CDS3184062 888 - 0.456081
lon plu3867 endopeptidase La, DNA-binding, ATP-dependent protease; heat shock K-proteinchromosome CDS4541401 2355 - 0.439915
msrA plu4555 peptide methionine sulfoxide reductase (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase)chromosome CDS5318686 648 + 0.455247
msrB plu2557 Peptide methionine sulfoxide reductase MsrBchromosome CDS3000941 411 - 0.452555
nrdG plu4500 Anaerobic ribonucleoside-triphosphate reductase activating protein (class III anaerobic ribonucleotide reductase small component)chromosome CDS5258346 465 + 0.445161
nrdH plu1287 Glutaredoxin-like protein NrdHchromosome CDS1497937 231 - 0.4329
pcm plu0717 Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartylchromosome CDS824812 627 + 0.457735
pcp plu4303 Pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase)chromosome CDS5026910 663 + 0.491704
pflA plu1612 pyruvate formate-lyase 1 activating enzyme (PFL-activating enzyme)chromosome CDS1925820 741 - 0.441296
pilU plu1057 chromosome CDS1236269 666 + 0.489489
ppiA plu0391 Peptidyl-prolyl cis-trans isomerase A precursor (PPIase A) (Rotamase A) (Cyclophilin A)chromosome CDS423451 570 + 0.407018
ppiB plu3805 Peptidyl-prolyl cis-trans isomerase B (PPIase B) (rotamase B)chromosome CDS4472489 495 + 0.426263
ppiD plu3865 Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)chromosome CDS4538732 1872 - 0.401175
ptrA plu0631 Protease III precursor (pitrilysin)chromosome CDS717168 2892 + 0.426003
radA plu0552 DNA repair protein RadA (sms)chromosome CDS622889 1383 + 0.498192
rtxC plu1335 Cytolysin-activating lysine-acyltransferase RtxCchromosome CDS1553214 462 + 0.47619
sirA plu4109 SirA proteinchromosome CDS4798159 255 - 0.454902
slyD plu0422 peptidyl-prolyl cis-trans isomerase, FkbP-type (rotamase)chromosome CDS451818 573 + 0.504363
smpB plu3378 SsrA-binding protein (small protein B)chromosome CDS4005528 483 + 0.440994
sohB plu2439 Possible protease sohBchromosome CDS2862686 1047 - 0.450812
sppA plu2553 protease IV (endopeptidase IV) (signal peptide peptidase)chromosome CDS2996740 1866 + 0.460343
sspA plu4013 Stringent starvation protein Achromosome CDS4703356 642 - 0.456386
sufB plu2621 SufB proteinchromosome CDS3064850 1497 - 0.449566
sufC plu2620 Probable ATP-dependent transporter SufCchromosome CDS3064046 747 - 0.412316
sufD plu2619 SufD proteinchromosome CDS3062755 1317 - 0.450266
surA plu0611 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase surA) (PPIase) (Rotamase C)chromosome CDS692947 1302 - 0.456989
tig plu3870 trigger factor (TF) (chaperone)chromosome CDS4546269 1305 - 0.408429
tpx plu2579 Thiol peroxidase (scavengase p20)chromosome CDS3021457 504 + 0.468254
trxA plu4664 thioredoxin 1 (TRX1) (TRX)chromosome CDS5437845 327 - 0.406728
trxB plu1599 thioredoxin reductase (NADPH)chromosome CDS1907395 960 - 0.476042
ureD plu2177 urease accessory proteinchromosome CDS2562603 966 + 0.47619
ureE plu2174 urease accessory proteinchromosome CDS2560639 597 + 0.41541
ureF plu2175 urease accessory proteinchromosome CDS2561232 687 + 0.473071
ureG plu2176 urease accessory proteinchromosome CDS2561971 636 + 0.449686