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Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome 1

Number of genes found: 118

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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RSP_2214 Nitrogen-fixing NifUSubName: Full=Nitrogen-fixing NifU; chromosome 1 CDS826916 561 - 0.677362
NA RSP_0500 putative HupF/HypC hydrogenase proteinSubName: Full=Putative HupF/HypC hydrogenase protein; chromosome 1 CDS2236771 318 + 0.742138
NA RSP_2685 Putative cytochrome c-type biogenesis protein, cycH chromosome 1 CDS1329510 1254 - 0.735247
NA RSP_1301 putative peptidaseSubName: Full=Putative peptidase; chromosome 1 CDS3070840 1671 + 0.701376
NA RSP_1816 Mg chelatase-related proteinSubName: Full=Mg chelatase-related protein; chromosome 1 CDS404461 1539 - 0.730344
NA RSP_1742 Serine protease, trypsin familySubName: Full=Serine protease, trypsin family; chromosome 1 CDS323186 1386 + 0.705628
NA RSP_2420 conserved hypothetical proteinSubName: Full=Putative proteasome-type protease; chromosome 1 CDS1049765 726 + 0.651515
NA RSP_2696 ABC transporter, fused ATPase and inner membrane subunitsSubName: Full=ABC transporter, fused ATPase and inner membrane subunits; chromosome 1 CDS1341579 1839 + 0.679173
NA RSP_0897 Glutathione S-transferase chromosome 1 CDS2648232 633 + 0.701422
NA RSP_6056 hypothetical proteinRecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; chromosome 1 CDS1131217 1116 + 0.749104
NA RSP_4042 Peptidyl-prolyl cis-trans isomerase, cyclophilin typeRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome 1 CDS1129054 594 + 0.686869
NA RSP_1934 Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family chromosome 1 CDS534620 402 + 0.736318
NA RSP_0142 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome 1 CDS1855758 1335 - 0.647191
NA RSP_0252 Protein-L-isoaspartatecarboxylmethyltransferaseSubName: Full=Protein-L-isoaspartate carboxylmethyltransferase; EC=2.1.1.77; chromosome 1 CDS1976110 654 - 0.665138
NA RSP_2617 Peptide methionine sulfoxide reductaseSubName: Full=Peptide methionine sulfoxide reductase; EC=1.8.4.12; chromosome 1 CDS1256620 405 - 0.674074
NA RSP_0785 Putative heat shock protein DnaJSubName: Full=Putative heat shock protein DnaJ; chromosome 1 CDS2529370 684 + 0.70614
NA RSP_0464 putative proteaseSubName: Full=Putative protease; chromosome 1 CDS2199168 897 - 0.70903
NA RSP_1531 heat shock protein hslV, proteasome-related peptidase subunitRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome 1 CDS119311 558 + 0.695341
NA RSP_1647 probable peptidaseSubName: Full=Putative peptidase; chromosome 1 CDS240494 960 - 0.764583
NA RSP_2068 putative ClpP-like proteaseSubName: Full=Putative ClpP-like protease; chromosome 1 CDS661551 840 - 0.688095
NA RSP_1855 conserved hypothetical proteinSubName: Full=Trypsin-like serine protease with C-terminal PDZ domain; chromosome 1 CDS450492 1782 - 0.739057
NA RSP_2544 Protein-L-isoaspartate O-methyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; chromosome 1 CDS1188005 660 - 0.683333
NA RSP_0725 Thioredoxin, thioldisulfide interchange proteinSubName: Full=Thioredoxin, thioldisulfide interchange protein; chromosome 1 CDS2469725 552 - 0.713768
NA RSP_0497 HupE/UreJ accessory proteinSubName: Full=HupE/UreJ accessory protein; chromosome 1 CDS2234496 576 + 0.744792
NA RSP_1016 small heat shock proteinSubName: Full=Small heat shock protein; chromosome 1 CDS2776202 477 - 0.675052
NA RSP_2674 conserved hypothetical protein chromosome 1 CDS1317485 348 - 0.626437
NA RSP_1401 Band 7 proteinSubName: Full=SPFH domain, Band 7 family protein; chromosome 1 CDS3179229 882 + 0.674603
NA RSP_0769 Glutathione S-transferaseSubName: Full=Glutathione S-transferase; EC=2.5.1.18; chromosome 1 CDS2511204 660 + 0.719697
NA RSP_2781 peroxiredoxin/glutaredoxin family proteinSubName: Full=Peroxiredoxin/glutaredoxin family protein; chromosome 1 CDS1429456 549 - 0.673953
NA RSP_2639 Putative arginine-tRNA protein transferaseRecName: Full=Putative arginyl-tRNA--protein transferase; Short=Arginyltransferase; Short=R-transferase; EC=2.3.2.8; chromosome 1 CDS1280450 843 - 0.671412
NA RSP_0356 Probable HflC proteinRecName: Full=Protein HflC; chromosome 1 CDS2086429 1023 - 0.709677
NA RSP_2953 glutaredoxin-related proteinRecName: Full=Glutaredoxin; chromosome 1 CDS1635676 366 + 0.614754
NA RSP_0883 SmpB proteinRecName: Full=SsrA-binding protein; chromosome 1 CDS2633511 474 + 0.635021
NA RSP_2213 conserved hypothetical proteinSubName: Full=Universal bacterial protein YeaZ; chromosome 1 CDS826318 609 - 0.760263
NA RSP_1978 molecular chaperone, DnaJ familySubName: Full=Molecular chaperone, DnaJ family; chromosome 1 CDS570606 636 - 0.641509
NA RSP_1334 possible chemotactic signal-response protein CheLSubName: Full=Putative chemotactic signal-response protein CheL; chromosome 1 CDS3102508 279 - 0.670251
NA RSP_1591 Predicted Glutathione S-transferaseSubName: Full=Putative Glutathione S-transferase; chromosome 1 CDS181568 1002 + 0.643713
NA RSP_1489 Protein containing thioredoxin domainSubName: Full=Thioredoxin; chromosome 1 CDS74424 915 + 0.685246
NA RSP_1464 putative periplasmic thiol-disulphide interchange protein (DsbA family)SubName: Full=Putative periplasmic thiol-disulfide interchange protein (DsbA family); chromosome 1 CDS50364 687 - 0.647744
NA RSP_2981 Putative protein-disulfide isomeraseSubName: Full=Uncharacterized protein; chromosome 1 CDS1671084 744 + 0.680108
NA RSP_1532 Heat shock protein HslVU, ATPase subunitRecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome 1 CDS119865 1302 + 0.665899
NA RSP_2479 putative phage host specificity proteinSubName: Full=Putative phage host specificity protein; chromosome 1 CDS1116439 3891 + 0.694423
NA RSP_2973 PeroxiredoxinSubName: Full=Peroxiredoxin; EC=1.11.1.15; chromosome 1 CDS1660539 462 + 0.658009
NA RSP_4043 Peptidylprolyl isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome 1 CDS1128555 510 + 0.64902
NA RSP_1325 putative flagellar basal-body P-ring formation protein FlgASubName: Full=Putative flagellar basal-body P-ring formation protein FlgA; chromosome 1 CDS3097539 420 - 0.735714
NA RSP_0357 Probable HflK proteinSubName: Full=Protease FtsH subunit HflK; EC=3.4.-.-; chromosome 1 CDS2087451 1182 - 0.692047
NA RSP_2072 Putative Phage-related Holin proteinSubName: Full=Putative Phage-related Holin protein; chromosome 1 CDS665867 900 - 0.713333
NA RSP_0009 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1711869 870 + 0.670115
NA RSP_0465 putative proteaseSubName: Full=Putative protease; EC=3.4.-.-; chromosome 1 CDS2200069 981 - 0.682977
NA RSP_0355 possible serine protease chromosome 1 CDS2084795 1482 - 0.684885
NA RSP_1746 conserved hypothetical proteinSubName: Full=Chaperone required for the assembly of F1-ATPase; chromosome 1 CDS327366 708 + 0.704802
NA RSP_0899 AhpC/TSA family proteinSubName: Full=Thiol peroxidase (Atypical 2-Cys peroxiredoxin); EC=1.11.1.5; chromosome 1 CDS2649289 489 - 0.689162
NA RSP_1572 Heat shock protein, Hsp20 family chromosome 1 CDS165426 468 + 0.655983
NA RSP_1397 Glutathione S-transferaseSubName: Full=Glutathione S-transferase; chromosome 1 CDS3175526 609 - 0.706076
NA RSP_1899 Predicted ATPaseSubName: Full=Putative ATPase; chromosome 1 CDS497371 1311 - 0.645309
NA RSP_2903 Probable PpiC-type peptidyl-prolyl cis-trans isomerase chromosome 1 CDS1580094 1308 + 0.70107
NA RSP_2389 putative glutathione peroxidaseRecName: Full=Glutathione peroxidase; chromosome 1 CDS1018151 531 + 0.691149
NA RSP_2044 ATPase chromosome 1 CDS637688 1377 + 0.442992
NA RSP_1935 Putative Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family chromosome 1 CDS535062 531 + 0.730697
NA RSP_2132 Protein of unknown function UPF0033SubName: Full=Putative redox protein, regulator of disulfide bond formation; EC=2.8.1.-; chromosome 1 CDS735283 228 - 0.72807
NA RSP_0241 Putative protein-S-isoprenylcysteine methyltransferase chromosome 1 CDS1963759 528 - 0.732955
NA RSP_1509 Glycoprotease (M22) metalloproteaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome 1 CDS96592 1095 + 0.742466
NA RSP_6157 conserved hypoothetical proteinSubName: Full=Conserved hypoothetical protein; chromosome 1 CDS3180107 270 + 0.659259
Gst RSP_1144 Glutathione S-transferase chromosome 1 CDS2904921 726 - 0.606061
SufC RSP_0437 Suf C, ATPaseSubName: Full=Suf C, ATPase; chromosome 1 CDS2170582 759 - 0.650856
aat RSP_0192 possible leucyl/phenylalanyl-tRNA--protein transferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome 1 CDS1909280 645 + 0.689922
cbbX RSP_1280 CbbX protein chromosome 1 CDS3047408 1026 - 0.65692
ccdA RSP_2134 putative cytochrome c-type biogenesis protein CcdASubName: Full=Putative cytochrome c-type biogenesis protein CcdA; chromosome 1 CDS735655 747 + 0.680054
ccmA RSP_1801 ABC heme exporter, ATPase subunt CcmARecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; EC=3.6.3.41; AltName: Full=Heme exporter protein A; chromosome 1 CDS386636 633 + 0.733017
ccmB RSP_1802 ABC heme exporter, inner membrane subunit CcmBRecName: Full=Heme exporter protein B; chromosome 1 CDS387265 657 + 0.712329
ccmC RSP_1803 ABC heme exporter, inner membrane subunit CcmC chromosome 1 CDS387970 729 + 0.662551
ccmF RSP_2633 Cytochrome c maturation protein, CcmFSubName: Full=Cytochrome c maturation protein, CcmF; chromosome 1 CDS1273029 1971 + 0.699138
ccmG RSP_1805 Probable thiol-disulfide interchange proteinSubName: Full=Putative thiol-disulfide interchange protein; chromosome 1 CDS388849 540 + 0.701852
ccmH RSP_2634 Cytochrome c maturation protein, CcmHSubName: Full=Cytochrome c maturation protein, CcmH; chromosome 1 CDS1274996 456 + 0.710526
ccoN RSP_0696 Cbb3-type cytochrome oxidase CcoN subunitSubName: Full=Cbb3-type cytochrome oxidase CcoN subunit; EC=1.9.3.1; chromosome 1 CDS2438690 1608 - 0.627488
ccoQ RSP_0694 Cbb3-type cytochrome c oxidase CcoQ subunitSubName: Full=Cbb3-type cytochrome c oxidase CcoQ subunit; EC=1.9.3.1; chromosome 1 CDS2437732 204 - 0.637255
clpA RSP_2293 Chaperonin clpA/BSubName: Full=Chaperonin clpA/B; chromosome 1 CDS914730 2316 - 0.656736
clpB RSP_1408 Chaperone ClpBSubName: Full=Chaperone ClpB; chromosome 1 CDS3183269 2613 + 0.681209
clpP RSP_0197 Protease subunit of ATP-dependent Clp proteasesRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome 1 CDS1912600 633 - 0.633491
clpX RSP_0196 ATP-dependent protease Clp, ATPase subunitRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome 1 CDS1911210 1266 - 0.631912
cox10 RSP_1827 Heme O synthaseRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome 1 CDS419115 933 + 0.676313
cox11 RSP_1828 cytochrome C oxidase assembly proteinRecName: Full=Cytochrome c oxidase assembly protein CtaG; chromosome 1 CDS420222 576 + 0.684028
cycJ RSP_2945 cytochrome C-type biogenesis protein, CcmE chromosome 1 CDS1625615 456 - 0.671053
dnaJ RSP_1172 Chaperone, DnaJRecName: Full=Chaperone protein DnaJ; chromosome 1 CDS2938529 1149 - 0.697998
dnaK RSP_1173 Heat shock protein (Hsp70, DnaKRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome 1 CDS2939750 1911 - 0.647828
flgA RSP_0036 flagellar basal-body P-ring formation protein FlgASubName: Full=Flagellar basal-body P-ring formation protein FlgA; chromosome 1 CDS1741889 669 + 0.772795
flgJ RSP_6093 FlgJSubName: Full=FlgJ; chromosome 1 CDS1786429 303 - 0.69967
fliS RSP_0040 putative flagellar protein FliSSubName: Full=Putative flagellar protein FliS; chromosome 1 CDS1745872 381 - 0.671916
ftsH RSP_0665 FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome 1 CDS2405469 1902 - 0.656151
glnD RSP_1811 uridylyltransferaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; Includes: RecName: Full=[Protein-PII] uridylyltransferase; Short=PII uridylyltransferase; Short=UTase; EC=2.7.7.59; Includes: RecName: Full=[Protein-PII]-UMP uridylyl-removing enzyme; Short=UR; EC=3.1.4.-; chromosome 1 CDS397822 2793 - 0.681346
glnE RSP_2643 Glutamate-ammonia-ligase adenylyltransferase chromosome 1 CDS1283622 2850 + 0.721403
groEL RSP_2311 Chaperonin Cpn60 (GroEL)RecName: Full=60 kDa chaperonin 1; AltName: Full=GroEL protein 1; AltName: Full=Protein Cpn60 1; chromosome 1 CDS932601 1644 + 0.650243
groEL3 RSP_2798 Putative chaperonin groELRecName: Full=60 kDa chaperonin; chromosome 1 CDS1523230 1632 - 0.716912
groES RSP_2310 Chaperonin Cpn10 (GroES)RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome 1 CDS932218 288 + 0.618056
grpE RSP_1219 putative chaperone protein GrpE (heat shock protein) chromosome 1 CDS2992502 570 - 0.682456
grxC RSP_1194 GlutaredoxinSubName: Full=Glutaredoxin; chromosome 1 CDS2966047 258 - 0.666667
hslO RSP_1207 putative Hsp33 proteinSubName: Full=Putative Hsp33 protein; chromosome 1 CDS2978214 990 - 0.682828
htpx RSP_0554 heat shock protein--probable proteaseRecName: Full=Protease HtpX homolog; EC=3.4.24.-; chromosome 1 CDS2291924 903 - 0.702104
hypB RSP_0506 NI2+-binding GTPase protein HypBSubName: Full=Hydrogenase nickel incorporation protein HypB; chromosome 1 CDS2240199 870 + 0.66092
hypC RSP_0508 Hydrogenase expression/formation protein HypCSubName: Full=Hydrogenase maturation protein HypC; chromosome 1 CDS2242545 291 + 0.735395
hypD RSP_0509 hydrogenase isoenzymes formation protein HypDSubName: Full=Hydrogenase maturation protein HypD; chromosome 1 CDS2242832 1140 + 0.696491
hypE RSP_0510 hydrogenase expression/formation protein HypESubName: Full=Hydrogenase maturation protein, carbamoyl dehydratase HypE; chromosome 1 CDS2244022 1023 + 0.73607
hypF RSP_0494 hydrogenase maturation factor FSubName: Full=Hydrogenase maturation factor F; chromosome 1 CDS2229068 2277 + 0.754062
lon RSP_2806 Probable ATP-dependent protease La proteinRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome 1 CDS1508872 2409 - 0.656289
msrA RSP_0559 Peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome 1 CDS2295945 675 - 0.684444
nifU RSP_0531 Nitrogen fixation proteinSubName: Full=Nitrogen fixation protein; chromosome 1 CDS2268702 741 - 0.759784
osmC RSP_0585 osmotically inducible protein OsmCSubName: Full=Osmotically inducible protein OsmC; chromosome 1 CDS2328340 423 + 0.666667
radA RSP_2456 DNA Repair ProteinRecName: Full=DNA repair protein radA; chromosome 1 CDS1097519 1359 - 0.706402
sohB RSP_1076 Peptidase family S49SubName: Full=Peptidase family S49; EC=3.4.21.-; chromosome 1 CDS2832130 798 - 0.68797
sufB RSP_0440 putative SufB chromosome 1 CDS2171696 1542 - 0.63489
surA RSP_1168 PpiC-type peptidyl-prolyl cis-trans isomerase chromosome 1 CDS2932108 861 - 0.679443
trxA RSP_1529 ThioredoxinRecName: Full=Thioredoxin; chromosome 1 CDS117813 321 + 0.660436
trxB RSP_1576 Thioredoxin reductase chromosome 1 CDS168853 954 - 0.687631
ureD RSP_0310 Urease accessory protein UreDRecName: Full=Urease accessory protein UreD; chromosome 1 CDS2038908 828 - 0.758454
ureE RSP_0304 urease accessory protein UreERecName: Full=Urease accessory protein UreE; chromosome 1 CDS2034136 549 - 0.712204
ureF RSP_0303 Urease accessory protein UreFRecName: Full=Urease accessory protein UreF; chromosome 1 CDS2033507 633 - 0.748815
ureG RSP_0302 Urease accessory protein GRecName: Full=Urease accessory protein UreG; chromosome 1 CDS2032887 624 - 0.692308
ybaU RSP_2005 possible peptidyl-prolyl cis-trans isomerseSubName: Full=Putative peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome 1 CDS604158 1866 - 0.711147